Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                            --------->ZAT14                                                                                         <-----------RAV1(1)                                                                                       <XXXXXXXXXXXXX                                                                                     ----------->RAV1(2)                                                                                     <------NtERF2                                                                                     ================RAV                                                                                     <---------ANAC46                                                                                    ------>NtERF2                                                                                 <-----------HVH21                                                                                --------->ANAC46                                     <----------DOF2                           <-------TEIL     <----                              <-----------GT1                              <---------------AtSPL8    ---------->DOF2      <----------DOF2                                   --------------->AtSPL3   tctccatatagctctccctctctctctctttttctctctctttctctccattctagttcatagcacatagactcatttaagtacgtcgcctgtgttgtct  6383400                                                                            ---------->DOF2                             --------->ARR11(3)                          <<<<<<<ZML2                  <---------ANAC58                                    --------->HSFB2a(2)              <----------DOF2<---------ARR11(3)                       --------->HSFC1(1)       <---------MYB52(1)  <---------TOE2(3)                          <---------HSFC1(1)    <---------ATHB12      --------->DAG2                              <---------HSFB2a(2)    --------->MYB46(3)   ---------->DOF2                         --------->GLK1(2) XXXXXXXXMIR2936  <---------ANAC58         <---------ALFIN1     <---------GLK1(2)       <-----------GT1 ------DOF2   ------>ZmHOX2a(1)           <---------REM1(2)   ----------->ARR10     <------------CBF   ttctcaaccattagtcctttgcttcgataaaggtattctctctctacacatttagacacacacatagattctctagaacaaagacatattgtactatctg  6383500               <------------------------ANAC81             <---------ZAT18                      ---------->DOF2        <---------YAB1                       <------ZmHOX2a(1)                           <-------GAMYB      <---------ICU4                  --------->ANAC58 <---------GLK1(1)                <---------MYB46(3)     <---------YAB1       <---------ANAC58  ----------->GT1               <---------ANAC58   <---------ICU4         <---------ANAC58 <---------TOE2(3)              <---------ANAC58   --------->YAB1<----------DOF2      --------->ANAC58 --------->GLK1(1)<-----------GT1<---------TOE2(3)  <---------ATHB12      <-----------GT1    <---------TOE1(3)   <----------DOF2         <---------YAB1   actaatcactattactgctctttttttttcttgattttgcaggctaaggaaaaaaagaaatctctctttctaattttcttgttttcattttggttgagac  6383600                 <------------CBF                --------->ATHB12                                               <---------ANAC46              <-----------TGA1                                                 <---------ANAC58              <-----------HVH21                                                <---------ANAC58        <---------ARR11(3)                                                 <---------ANAC58   ------------>CBF                                      <------------------------ANAC81   <------ZmHOX2a(2)                              <----------DOF2          <---------ANAC58  --------->ARR11(3)                  <----------DOF2 <----------DOF2<----------DOF2          <------   ttgagatcaatgtcttcgtcattggaacagtaacctttctctttgattcaaactttctttcattttcttctcttttttcttgtgtgtctgaagaagatta  6383700                                                                                                    -                                                                                        -------------                                      <---------AHL20(2)                                ------------- ---YAB1                              --------->AHL20(2)         ---------->DOF2----------->RAV1(1)--   tagtacaagtgtcattctcaaaattttgtcttagggttttttaattttgttacttcaaaaacccctaaaaaggcatgaacaacaacattttcagtactac  6383800                                             <-----------GT1         <---------ATHB12                  --------->ATHB51         ----------->TGA1                  <---------ICU4     <---------YAB1                       <---------YAB1--------->ATHB12                          <--   --------->AtMYB61                      --------->ICU4<---------ICU4                        ------- -------->AtMYB61                      <---------YAB1  --------->MYB46(3)                 --------->ANAC46 -->AtSPL3                        --------->YAB1    --------->MYB46(3)         <<<<<<<<<TBF1  <------ -->AtSPL8--------->YAB1          <---------ICU4  --------->ANAC46    <-----------GT1   --------->MYB52(1) ------->MYB46(3)                <---------YAB1  ------>ZmHOX2a(1)<----------DOF2       <---------DOF5.7(2)   taccaccatcaatgacgactacatgttattcccttataatgaccattattcctcacaaccattgctcccttttagcccttcttcttccattaacgacatc  6383900                                                                                                   <-                                                                                                   --                                                                                                 ----                                                                                                 <---                                                                                                -----                                                         <---------MYB55(2)                     <----        <---------ALFIN1                      --------->TOE2(3)                                <-----     --------->ANAC58                     <---------ICU4 <---------MYB111(2)                  -------     --------->ANAC58                     --------->YAB1 --------->MYB46(3)                 ---------     --------->ANAC46               <---------WRKY18(1)  <---------MYB111(1)                ---------   <-----------GT1               <---------ICU4          <------------MYB.PH3(2)           --------->LBD16 -------YAB1                  --------->YAB1<---------YAB1------->GAMYB  <-----------GT1  <---------LBD16 -->ARR11(3)                 <---------ATHB12--------->YAB1         <----------DOF2--------->ARR14(2) ---ARR11(3)               --------->WOX13(1)<---------ICU4         <---------DAG2 <---------ARR14(2)   ttgattcactccacctctaacacatcaaacaatcatcttgaccatcatcatcaattccaacaaccttctcctttttctcacttcgaatttgccccggact  6384000      ------>ZmHOX2a(1)  <---------ALFIN1 --------->DEAR3(1) --------ZAT18                                               --------->ANAC58 ---->NtERF2                                     ------>MYB46(1)    --------->YAB1 ----->ZAT18                                     ------>MYB83--------->ANAC58     <---------ZAT14 ------ZAT18                                   --------->AtMYB61    <---------ICU4--------->ZAT14 ------------------>TaNAC69(2)                 <---------MYB59   --------->WOX13(1) -----ATERF1(1)       --------->LBD16    --------->YAB1    --------->MYB52(1) <---------ALFIN1 ----DEAR3(1)        --------->HSFB2a(2)<---------YAB1------>MYB83 <---------ATHB12   <----------DOF2 -->SPL7           --------->ANAC46   <---------ICU4  ------>MYB46(1)       <-----------HVH21 -->HVH21    <----------DOF2          --------->YAB1--------->AtMYB61      --------->WOX13(1) >LBD16<---------ALFIN1              --------->ICU4--------->MYB46(3) <---------YAB1  <---------DAG2   gcgccctcctcacctctttccacccagaaaacaatggccatgatgataaccaaaccatcccaaacgacaatcatcatccatcacttcactttcccttgaa  6384100                                                                --------->GLK1(2)                                                           --------->LBD16                                                     --------->KAN4(2)                                                     <---------GLK1(2)                        <---------ZAT18              <---------ARR14(2)                   ------>MYB46(1)                   --------->ARR14(2)                   ------>MYB83                     <---------HSFB2a(1)                   ----------->RAV1(2)              --------->HSFB2a(1)                 --------->MYB46(3)                 <---------HSFC1(2)                 ------->GAMYB                      --------->HSFC1(2)               -------->P   <---------LBD16    --------->HSFB2a(2)                              -----               --------->ANAC58                <---------HSFB2a(2)                              <----               --------->ANAC58            --------->TOE2(3)    <-----------ARR10               -----               --------->ANAC46            --------->TOE1(3)   <---------GLK1(2)              -------             --------->MYB46(3)         <-----------GT1  <---------LBD16                 ----------->GT1   caacaccattgtagaacaacccactgagccctcggaaactataaaccttatagaagattcccagagaatctcaacttctcaagacccaaaaatgaaaaaa  6384200                                                               <---------TOE1(2)                      --------->ANAC58                       --------->TOE1(2)              --------->MYB52(1)                           =============HOX2a_HOX2a          <---------At4g35610                              <------ZmHOX2a(2)          --------->At4g35610                    <----------ID1<---------TOE2(2)          --------->ZAT2                      --------->MYB52(1) <------ZmHOX2a(1)                 <- --------->ANAC58     --------->ANAC58       ---------->DOF2------>ZmHOX2a(2)                      <- --------->ANAC58----------->HVH21     --------->RAP2.6(3)<---------ARR11(3)              ---------->DOF2 ---->ANAC58  <---------ARR14(2)      --------->MYB52(1)  --------->ARR11(3)            <------NtERF2 ------ID1<---------ZAT2          <------ZmHOX2a(2)   --------->ANAC46                 ------>NtERF2 ---->ANAC58  --------->ARR14(2) --------->ARR11(3)   --------->ANAC58                <---------ETT(2) --->DOF2----------->RAV1(1)     <---------ARR11(3)   --------->ANAC58             <---------REM1(1)   gccaagaaacccagcagaacggacaggcacagcaagatcaaaacggccaaagggacacgagatcgtaggatgagactctcgctagatgtcgccaaagagt  6384300  Previous    Next  AGI:  At3g18550.1    Description:  BRC1/TCP18 (BRANCHED1); transcription factor. similar to BRC2/TCP12 (BRANCHED2), transcription factor [Arabidopsis thaliana] (TAIR:AT1G68800.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO68011.1); contains InterPro domain Transcription factor, TCP (InterPro:IPR005333) Range:  from: 6383775    to: 6385610    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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