Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                       <---------ARR14(2)        <---------YAB1                                         <---------ZAT18       <---------YAB1<---------ICU4                                      ---------->DOF2--------->ARR14(2)     <---------YAB1   --------->DAG2                ------->MYC3     <---------ANAC58  <---------ZAT2 <---------MYB52(1)  --------->DAG2                 <-------MYC3     <---------ANAC58  --------->At4g35610 ---------->DOF2              --------->TGA1a     <---------ANAC46  <---------At4g35610 ---->DOF2                    ===================bZIP_DOF<---------YAB1     --------->ICU4     <----- ->GT1 --------->MYB52(1)     <---------TGA1a   <---------ANAC46   --------->MYB52(2)     <----------   agaaaaaggtaagggaaacaaatatcagtctcacatgtgttaatgcgcttgggcgtattttgattatgttagctggtcattatcagttagtttaaccatt  6360800                                ----------->RAV1(2)                          <---------AHL20(2)                                                  ------>MYB83                      <---------ANAC46                                                   <-----------GT1                      ----------->GT1                                                 --------->MYB52(2)                      <---------ANAC58                                            <------MYB83------>MYB46(1)                   ----------->TGA1                             <---------YAB1    <------MYB46(1)                   ----------->HVH21 <---------YAB1            --------->AHL20(1) ----------->GT1                 <---------ZAT6 --------->ANAC55(2)           <---------ICU4     --------->MYB46(2)             <---------ZAT14    <---------ANAC55(2)          --------->ICU4      --------->MYB59         --------->GLK1(2)--------->AHL20(2)         <-----------GT1           <---------MYB52(1) ----MYB52(1)--------->ZAT14  <-----------GT1        --------->ZAT6            <<<<<<<<<MYB1<-------- -GT1<-----------GT1  <---------ANAC58             <-----------GT1             <<<<<<<<<MYB2<--------   agtcattctacaatctgtagtgtgacgtttaattacctgatgattcaaacatttttcactataaatattatgaagttatcagttaggttatttaccaaac  6360900                                                                                 --------->TOE2(3)                                                                                 --------->TOE1(3)                                                                                 <---------MYB59                                                                                ----------------->AG                                                                                ----------------->AGL2                                                                             ------->GAMYB                                                                            --------->MYB46(3)                                                                            <---------MYB52(2)                    ---------->DOF2                                      <----------ID1                  <---------MYB52(2)                              --------->HSFC1(1)          <---------bZIP60(1)               --------->YAB1        --------->HSFB2a(2) -MYB46(2)--------->bZIP60(1)               ----------->GT1       <---------HSFC1(1)              --- -MYB59   --------->TGA2(1)       <----------DOF2 <----------DOF2 <---------HSFB2a(2)      <---------   aaaaattcaatgacataacaactaaagtctcattccctttaaaaaatggtaacttttgtaatccatttcgagaagacaacaaacctaaattggctttgtg  6361000                                                                     --------->AHL20(2)                                                                    --------->YAB1                                                              ----------->GT1                                                       --------->ANAC58          --------------->AtSPL3                       --------->AtLEC2  --------->AHL20(2)     --------->GLK1(2)                    <---------TOE2(3)---------->DOF2<---------AHL20(2)  <------MYB46(1) -------->GT1   <----------DOF2          --------->YAB1--------->ANAC46  <---------AHL20(2)   <------MYB83 -DOF2<-------TEIL     <----------DOF2--------->TOE2(3)--------->ANAC58--------->YAB1        --------   aagtaagattcagtcgtactttgctctttcaatacttgaacattaatgaaaaattccaagcaaaaggaaataaaaataaatagtttgactcaaatttggt  6361100                                                                                           <------NtERF2                                                                                         <---------DEAR3(1)                                                                                        <------NtERF2                                                                                        --------->ATERF1(1)                                                                                       <---------ATERF1(1)                                                                                       <-----------HVH21                                                                                       ------>NtERF2                                                                                     <------NtERF2                                                                                     --------->ATERF1(1)                                                                                    ------>NtERF2                                                                                  *TSS--------->DEAR3(1)              <------------CBF                 <-----------GT1           --------->At4g35610             --------->ATHB12               <----------DOF2              <---------At4g35610            <---------YAB1               --------->GLK1(2)           <-----------TGA1--------->RAP2.3(1)    <----------DOF2             --------->At4g35610             ------->TEIL    <-----------RAV1(1) ->MYB59  <---------ZAT6        <---------At4g35610 <----------DOF2<-----------STF1 <---------RAP2.3(1)   aatgggcttatagtgttattgggtcttcatcttcagcccaaataatcttttactctttcaagtctgaacgtcgtcatcttcgttgtcgccgtcgtcgttt  6361200                                                         --------->DEAR3(1)                                                       <---------ATERF1(1)                                                      --------->ANAC46                                                      --------->ANAC58                                                   ----------->HVH21                                                   <---------SPL7              <---------MYB52(1)                --------->MYB52(1)             <-------GAMYB                   --------->ANAC46            <-----------RAV1(1)            <-----------GT1------>NtERF2                       <------        <---------ZAT14      <-----------HVH21 ----------->HVH21                   <---------MYB52(1)        --------->ZAT14     <---------ANAC58 --------->ANAC58                      <------NtERF2        <---------At4g35610 <---------ANAC58 --------->ANAC58                     --------->LBD16    --------->ARR14(2) --------->YAB1  <----------DOF2--------->ANAC58          <---------LBD16     <   ctctcatttctgctctgttgtgctatcgtagcgtcgcgctcctttaaacgcgacggacgcagccttctctgttcatcgtttcgccggaagttttcttcag  6361300                                                                                  ------>ZmHOX2a(2)                                                                                --------->ARR14(2)                                                                           ------>ZmHOX2a(2)                                                                         --------->ARR14(2)                                                                         <---------ARR14(2)   <---------CCA1(1)                                                  <---------HSFB2a(2)   <---------RVE1(1)                                                  --------->HSFB2a(2)  <---------ARR11(3)                                                 <---------LBD16        ---------  --------->ARR11(3)        <---------YAB1                     --------->LBD16 <------ZmHOX2a(1) --------->YAB1            <---------AHL20(2)                  ===================HOX2a_HOX2a    <--- -----RAV1(2)     <-------GAMYB                                ==========================HOX2a_HOX2a ---------YAB1   <---------MYB46(3)          ----------->GT1   ------>ZmHOX2a(1)<---------ARR14(2)   gtatgatattttgagaccgtcgttgatatttttattcagtttccatagagaaaaaaaaacaattcctgagttctggatcgaggatcgatttcgataatac  6361400                                                       <-----------GT1                                                     <----------DOF2           <---------ANAC58                       <---------ARR11(3)           <---------ANAC58                --------->ALFIN1                                       <--           <------MYB83                  --------->ALFIN1                                <---------ARR14(2)           <------MYB46(1)       <---------REM1(1)--------->ARR11(3)                     --------->ARR14(2)     --------->DAG2    ----------->GT1   <---------ANAC46                       <---------At4g35610    ---------->DOF2   --------->DAG2 <---------At4g35610                       <-----------GT1    <-- >YAB1    --------->MYB59     <-----------RAV1(1)<---------GLK1(1)            <-----------GT1  ------ ------HSFB2a(2)     ---------->DOF2 --------->At4g35610                <---------YAB1<---------ANAC46   tcgaagaaaagttgggttcttcgtaaagttatttgttgtagctgtgtgtggagttctttacattttcttcgattttgattttagctcttcgtatatgaaa  6361500                                                                              --------->MYB52(2)                                                                            <--------P                                                        --------->LBD16--------->ZAT2                                                      <---------At4g35610 ----------->GT1<---------WOX13(1)                                                      --------->At4g35610 <---------MYB46(3)                                  <----------DOF2   ---------->CDC5    <---------At4g35610                           <------------------------ANAC81             --------->At4g35610         <- -------DAG2      <---------------AGL15             <-----------RAV1(2)<---------ZAT2   <---------ANAC58 --------DOF2     --------------->AGL15     <----------DOF2    <---------AHL20(2)       <---------ANAC58 ->TEIL          <-----------------AGL2 <-----------------AGL1--------->AHL20(2)      <---------YAB1-   ctttttgatttttaaaatttctcaaattgggtttttctttgtttctcttttggcacagcggagatttattttcagctggttagtagttttgagtgactac  6361600              <---------HSFB2a(2)                                                  <---------ANAC46              --------->HSFB2a(2)                                       <---------GLK1(1)  --------->LBD16            <---------REM1(1)                                           --------->GLK1(1) <---------HSFB2a(2)         <---------MYB46(3)                  ---------->DOF2           --------->ARR11(3) --------->HSFB2a(2)   <<<<<<<<<<<<<<<<<LFY       <---------ARR11(3)                       <---------ARR11(3)<---------LBD16 --------TOE2(3)              --------->ARR11(3)                  --------->ALFIN1 <---------ANAC58 ---------->GT1     <---------MYB52(2)     <-------TEIL    ----------->HVH21       <---------ANAC58 -   tgaggtaacaatggttgtagaaactatcgagaggtcttgtgagggttcaaagagaagacatgtgaacggtggagatatcgctgttccttgttcgggagaa  6361700  Previous    Next  AGI:  At3g18520.1    Description:  HDA15 (HISTONE DEACETYLASE 15); histone deacetylase. Identical to Histone deacetylase 15 (HDA15) [Arabidopsis Thaliana] (GB:Q8GXJ1;GB:Q3EB46;GB:Q8LD93;GB:Q9LS38); similar to HDA05 (HISTONE DEACETYLASE5), histone deacetylase [Arabidopsis thaliana] (TAIR:AT5G61060.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO68018.1); contains InterPro domain Histone deacetylase superfamily (InterPro:IPR000286); contains InterPro domain Zinc finger, RanBP2-type; (InterPro:IPR001876) Range:  from: 6361182    to: 6365621    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
	printer-friendly version