Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                                    ---                                                                                               <-----                                                                                               ------                                                                                              -------                                                                                              <------                                        =====================HOX2a_HOX2a                    ---------             ---------->DOF2            <------ZmHOX2a(1)                                  --------->MYB52(1)    <---------WOX13(1)               <---------AtLEC2                                     -----------  --------->ATHB12          <----------DOF2           <------ZmHOX2a(2)                   <---------SPL7 <---------YAB1   --------->TOE2(3)  <-----------------AG<---------O2                 <-----------GT1   tctatgattgatgcttaaagccttattcgtctttggtttgcaggaattgggaagcgatcacttggctcttgtttctgaatttgtctttgaaccggacggt  6355300                                                                                   ----------->RAV1(2)                                                                           <---------MYB59                                                                         --------->SPL7                                                                         --------->MYB52(1)                                                                       --------->ZAT18                                           <---------YAB1              <---------SPL7    --------->YAB1 ------->DOF2                           <---------MYB52(1)            <---------ANAC58   <---------ICU4 --GAMYB                              ----------->GT1                 <---------ANAC58  <---------YAB1 --->At5g28300 <---------At4g35610 ------>MYB46(1)                   <---------------AtSPL8 ---->GT1      --------->ZAT2      ------>MYB83            <---------AHL20(2)      --------->ANAC55(2) ---MYB46(3)   <---------ZAT2    <---------MYB59          <---------AHL20(2)       <---------ANAC55(2) >SPL7         --------->At4g35610 --------->MYB52(1)     --------->AHL20(2)     <-----------GT1 >HVH21       ------>NtERF2     --------->DEAR3(2)    <---------YAB1 <---------------AtSPL3<---------YAB1   taaaggcatctagtgccagcttagttttctttgaaccgaaccgttataaatgtgtttttattaaatgtataagcgtaccgaaattacctgatcatggttc  6355400                                                                       <-----------HVH21                       --------->AHL20(2)                      <---------ANAC58                      <---------AHL20(2)                       <---------ANAC58              <---------HSFB2a(2)                          <---------ANAC58     --------->ARR11(3)              --------->HSFB2a(2)              --------->HSFC1(2) --------->ARR14(2) <---------AHL20(2)         ------>MYB83 --------->AHL20(2)  --------->YAB1   <---------ANAC46     <---------ARR11(3)         ------>MYB46(1)   --------->YAB1<------ZmHOX2a(2) <---------ANAC58    <------ZmHOX2a(1)      --------->DEAR3(2)  --------->AHL20(2)   <---------HSFC1(2) <---------ARR14(2)--------->AHL20(2)   tatatcaaaccgacttctcgataaataaataaaaattgagacgatcagaagcttcaatcttgtgtgcgtattgggtcactaggatattaaatcgacttct  6355500                                         <---------ARR11(3)                                         <---------ARR14(2)                                         <---------AGP1                                         --------->ARR14(2)                                      <---------HSFB2a(2)                                      --------->HSFB2a(2)                     ------->TEIL                                     <---------LBD16                   --------->AHL20(2)          ---------->DOF2         <---------GLK1(2)                <------MYB83         <---------AHL20(2)   <---------ANAC58                     ----------->GT1     ---------->DOF2        <---------AHL20(2)    <---------ANAC58          ------>NtERF2  <---------AHL20(2)   <--------  ----------->GT1             --------->ANAC55(2)    --------->At4g35610  --------------->AtSPL8  --------->ANAC58         --------->ZAT14           <---------At4g35610  <---------------AtSPL8  --------->ANAC58         <---------ZAT14 ------>ZmHOX2a(2)       <------MYB46(1) ---------->DOF2---   tcgaacgtaatttaaagtgagagaaccagtttacttgattctggatctaaaccgaagcggacataagcttggtttaaatgtaccaaaaagaaagaattga  6355600                            --------->At5g28300                           ----------->GT1                           --------->LBD16       --------->SPL7     --------->HSFB2a(2)     <---------SPL7       <---------HSFB2a(2)                     ---------->DOF2   <---------------AtSPL3<---------LBD16        ---------->DOF2----------->GT1                     -- <------------CBF      <---------ARR14(2)  --------->GLK1(1) --------->At4g35610                  --- ----CBF     <-----------------AGL3  ---------->DOF2  <------------CBF*TSS                --------->CCA1(2) --------->CBF         --------->ARR14(2)  <---------GLK1(1) <---------At4g35610         <----------ID1   accaattggtacggttctaatcttggttccggtaaaatgaaaaggaattctaaagagattgagagctgtaaagttggaatcgaaggaagaagagacaaga  6355700                                                                                    <---------GLK1(2)                                                                                    <---------ARR14(2)                                                                             --------->ATERF1(1)                                                                            --------->PCF2                                                                            ------>NtERF2                                                                            <---------ATERF1(1)                                                                            <---------ZAT18                                                                            <---------TCP11(2)                                                                            <---------PCF5                                                                            <---------TCP15(1)                                                                           --------->TCP15(1)                                                                           <---------PCF2                                                                           --------->TCP20                                                                           <---------PCF5                                                                          <---------TCP15(2)                                                                          --------->ATERF1(1)                                                                         <---------ATERF1(1)                                                       --------->ZAT2    <---------RAP2.3(1)                                                       <---------ZAT2    --------->ABI4(2)                                                  <------ZmHOX2a(2)      <---------MYB46(3)                       <---------At4g35610       <-----------ARR10       --------->LBD16                   --------->ALFIN1           --------->ANAC58           ------>NtERF2                   <----------CDC5            --------->ANAC46          --------->ALFIN1                  <-------GAMYB              <---------LBD16            <---------ANAC46                 <---------ANAC58         --------->ANAC58              <---------DEAR3(1)                 <---------ANAC58      <---------ARR14(2)              <------NtERF2--------->ARR14(2)            --------->MYB52(1)  <---------bZIP60(2)    --------->At4g35610<------NtERF2   --------->ANAC58           <---------AHL20(2)----------->HVH21--------->ANAC58         <---------LBD16    --------->ANAC46      <------ZmHOX2a(1)--------->At4g35610<---------ANAC55(2)        <---------DEAR3(1)   --------->ANAC58     ----------->GT1--------->WRKY38(1)--------->ARR14(2)           --------->HSFB2a(2)   --------->ANAC55(2) ------->DAG2    <---------ANAC46     <-------GAMYB--------->YAB1   <---------HSFB2a(2)   <---------ANAC55(2) ------->DOF2   <---------------------WRI1--------->ANAC58    <---------ALFIN1  <---------LBD16   ---   gaaagtgaggaaattaatggcgttgagctcaatgacatggggttacgcacggatcatagctggaacacttctcggcggggccctcggattctacgtaatg  6355800                                                                                          <---------At4g35610                                                                               <------MYB83                                                                               <---------ANAC46                                                       <---------ANAC58        <------MYB46(1)    ---                     <---------ARR11(3)                <---------ANAC58     <---------MYB52(1)  <----             --------->At4g35610                   ---------->DOF2         <-------GAMYB  --------->At4g35610             <---------At4g35610                --------->YAB1            <-----------RAV1(1) <------ ---->TEIL  --------->MYB59                  ------>ZmHOX2a(1)     --------->TOE2(3)  --------->ANAC46   catcgcatcgaagttagctacaaggtctgtttcttctctctgtcttcctatgagaaagcttgtgctcgaccttagactgttgggttttacgcagatgagg  6355900                                                                       <---------ATHB12                                                                     --------->WOX13(1)                                       <----------ID1              <------ZmHOX2a(2)                                   <---------At4g35610            --------->AGP1                             --------->GLK1(1)         --------->GLK1(2)                             <---------GLK1(1)         <-----------ARR10     --------->GLK1(2)                            <---------ARR14(2)         --------->ARR11(3)    <---------ARR14(2)   <------ZmHOX2a(1)        --------->ARR14(2)         <---------ARR11(3)    --------->ARR14(2) ------>ALFIN1             <------ZmHOX2a(1)      ----------->GT1--------->At4g35610          <------ --ZmHOX2a(1)        <---------HSFB2a(2)--------->CCA1(2)--------->TOE2(3)  <---------GLK1(2) <------ ---TOE2(3)    <---------ICU4--------->CCA1(2)   >>>>>>>>>TBF1   <---------At4g35610  <---------At4g35610   atggaggaagcgttgaatcaatacgagaaggatatgcagaagagacaagaagaagaaaatcttattcagatcaatgaagaatctgtttagcttatttctt  6356000                                                                                          <------MYB46(1)                                                                                          <------MYB83                                                                                         --------->MYB59                                                                                         <---------AtMYB61                                                                                     <------MYB46(1)                                                                                    <---------AtMYB61  <---------ANAC58                                                                  --------->MYB59  <---------ANAC58                --------->MYB46(3)     <----------DOF2          <---------MYB52(1) ---ANAC58                      --------->MYB52(1)       <---------DAG2      <-----------GT1 ---ANAC58 ---------->DOF2      ----------->RAV1(1)   <-----------GT1    ------->TEIL<------MYB83  --   ggtagcatgccttcaaagtgttcgatgaaatgcccaacagatgtttgatgctgttttgactttttttctctcatgtatttttcggtttggtttggtctgg  6356100                                                                   --------------->AGL15                                                                   <---------------AGL15                                <---------ICU4  <---------MYB46(3)----------------->AGL2   --------->YAB1               <-----------GT1<---------AtMYB61--------->RAP2.6(2)  <---------YAB1             --------->YAB1 --------->ICU4    --------->At4g35610     ------->TEIL ------->ICU4        <----------DOF2        <---------YAB1 ---------->DOF2           <---------CCA1(2)   cattatgaaaatgtttcatttgtctttggtttaataactatataccatgatggtggaccagagaagcagccatattgagcattatatgtatctttcatct  6356200  Previous    Next  AGI:  At3g18500.1    Description:  similar to endonuclease/exonuclease/phosphatase family protein [Arabidopsis thaliana] (TAIR:AT1G73875.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO68025.1); contains InterPro domain Endonuclease/exonuclease/phosphatase (InterPro:IPR005135) Range:  from: 6352544    to: 6355448    Orientation: Forward Links:  TAIR  MIPS    AGI:  At3g18510.1    Description:  unknown protein Range:  from: 6355670    to: 6356159    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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