Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                                     --                                                                                                   --                                                                                                   <-                                                       ----------->GT1                             --                                                      <---------TOE1(3)                            <-                                           <---------DAG2                                         ---                                           ==========================================================            <---------ICU4                 --------------->AGL15                                  <--  <---------ANAC46                         <----------DOF2                                        <--  <---------ANAC58             ---------->DOF2        <---------TOE2(3)                           ---  <---------ANAC58    <---------DAG2       <---------------AGL15               --------->ZAT6     <-- -AHL20(2) --------->ICU4   --------->ANAC46    <---------ANAC46       <---------At4g35610    -------   ttttgtgtgtgtaatcagtaatcgccttacacaaaaagacatatacttttttgtgtaaggttttttttttttgagctactatcactaaatttgaaatcaa  6352100          <---------------AGL15          --------------->AGL15 <---------WOX13(1) ------->ATHB12 ------->ATHB51 --------ICU4 ------>HAHB4 -------ATHB1                  --------->YAB1 ------>AHL20(2)          --------->YAB1 =========================MADS_MADS                              <------ZmHOX2a(1) -------ATHB51            --------->AHL20(2)            <---------ICU4<---------YAB1        <-------- -------ATHB12 ---------->DOF2<---------YAB1           <---------AHL20(2)             <---------ARR11(3) ------>ICU4  --------->YAB1 <---------ARR11(3)        --------->AHL20(1)             --------->ARR11(3) -------AHL20(2)    ----------->GT1                    --------->AHL20(2)            <---------GLK1(2) -->AHL20(2) <---------ATHB12--------->ARR11(3)       --------->AHL20(2)---------->DOF2   --------->YAB1   ataattgatactccaataaaagtagaaataatatcatagtatatgaaaaaacaaaaaaaaattacaaggacgatgaaagaaaaaacaaaatctcataact  6352200                    <---------ARR11(3)                    --------->ARR11(3)                            --------------->AGL15        <---------ARR11(3)                                       <-----------------AGL3        --------->ARR11(3)                                       ----------------->AGL3       --------->YAB1        <---------YAB1                      ----------------->AGL2   --------->AHL20(2)      --------->YAB1       --------->AHL20(2)<---------------AGL15 -CCA1(2)   --------->At4g35610               --------->YAB1   ------>ZmHOX2a(1)         --------->AHL20(2)   caaaatcaaatatcatctccaagttcttaacatgataaaactagactaaaataaaaactgacatcctactaaaattagaaacaaaatgacataaattgaa  6352300                                                                 --------->At4g35610                                                                 <---------At4g35610                                                             ------>ZmHOX2a(2)                                                            <---------GLK1(1)                                                            <------ZmHOX2a(2)                                                            --------->GLK1(1)          <---------ZAT18                                                           <-----------ARR10           --------->ZAT18                                                           <---------ARR11(3)          <---------ZAT14                                          --------->LBD16  <---------AGP1              --------->ZAT14                                      --------->GLK1(2)    <---------ARR14(2)       <---------ANAC46                                      --------->ARR14(2)   --------->ARR11(3)     --------->ZAT14                                      <---------ARR14(2)   --------->ARR14(2)     <---------ZAT14                                     --------->RVE1(1)    <---------GLK1(2)      <---------ANAC46                            --------->AHL20(2)            <------ZmHOX2a(1)      <---------REM1(1)   atcaaactcacaaaaaaaaacaatagacattaaaacaaaaaatccgaataacaaaaaacaggatctcagctaaacaaggcctggtgtagtatactagtat  6352400                                                                           ------>NtERF2                                                                          <----------ID1                                                                      --------->SPL7                                                                <-----------GT1                       <---------AHL20(2)                  <---------CCA1(1)                 <------MYB46(1)                          --------->ARR11(3)                 <------MYB83                             <---------ARR11(3)            <-----------RAV1(1)                --------->MYB46(2)                        --------->AHL20(1)            <---------ANAC58                <---------AtMYB61           ----------->GT1<---------RVE1(1)            <---------ANAC46                --------->MYB111(1)   ---------->DOF2     <---------AHL20(1)<------NtERF2 <---------AtMYB61                --------->MYB59  ----------->HVH21    ---------->DOF2<---------MYB52(1) <---------ANAC58   tggcccatggcccatggtttggtatttttttttctctgaccaaaggaagaaaaaaaaaaagatatttatccgtatggcgccaagaggtttgtgtggtttt  6352500                                                                                              -------                                                                                              <------                                                                    <---------ANAC58          -------                                                               <---------ANAC46               <------                                                      <---------ANAC58            --------->ANAC58                                                      <---------ANAC46            --------->ANAC58                                                    <---------ANAC46<---------ANAC58         <-------                      <---------ANAC58             <---------MYB52(1)<---------WOX13(1) --------->ANAC58          <<<<<<<<<SARD1                         <---------ANAC58  --------->ATHB12     --------->ANAC58          <<<<<<<<<CBP60g            --------->ANAC46 <---------ANAC58        <-----------HVH21   <--     --------->AtLEC2 <---------ANAC58      *TSS <---------ANAC58 --------->WRKY38(1)--------->WRKY18(1)   cgatttcatccaaatttctgaatttcgtctctaacatccacaaaatcgaatgcgttgtgtgaatcgcgttgattgttcttggtcacggccaagcgaagct  6352600       <-----------GT1   --------->ARR14(2)   <---------ARR11(1)                                                               =================   <-----------ARR10                                                                <-----------RAV1(1)   ------->TEIL                                                                     --------->ALFIN1   <---------ARR14(2)                                                               --------->MYB52(2)   <---------ARR11(3)         <---------At4g35610                               <---------ANAC46  <---------CCA1(2)      <----------DOF2                                     <----------DOF2  <---------ARR14(1)    <---------DAG2                                     ------>ZmHOX2a(1) -->HSFC1(2)      <---------MYB46(3)                                   --------->ARR14(2) ---At4g35610    <---------AtMYB61                                     <---------MYB52(1)    ------>ZmHOX2a(1) -->At4g35610   <---------MYB52(1)                           <---------CCA1(2)  <---------ANAC58 ---HSFC1(2)   --------->LBD16----------->RAV1(2) <----------DOF2    <---------ANAC58       <-------- ----ARR10   <---------LBD16  --------->At4g35610 ------>ZmHOX2a(1)  <---------ANAC58<-------GAMYB<-- -------At5g28300--------->ALFIN1                 <---------DAG2 <----------DOF2<---------ANAC58-----   taccgtatcttaccctccggtggtcacctttcatctggattccatcaatgtcctttatcgtctctatctttccgttcctctttcgtgtgttgctcctcct  6352700                                                                                 ------>NtERF2                                                                                <---------ANAC46                                                                               <------NtERF2                                                                               --------->RAP2.3(1)                                                                              ------>NtERF2                                                                              <---------ATERF1(1)                                                                              --------->LBD16                                                                             --------->ANAC46                                                                             --------->LBD16            --------->SPL7                                                   <---------DEAR3(1)          <---------SPL7                                                    <---------LBD16    --------->HSFB2a(2)                                                     --------->LBD16    <---------HSFB2a(2)       --------->YAB1                      --------->GLK1(2)  ----------->RAV1(2)        <---------ATHB12                     --------->ARR14(2) =============RAV        --------->LBD16                          <---------ARR14(2)          <------ZmHOX2a(2) -ALFIN1--------->DEAR3(2)  <---------ARR11(1)        --------->LBD16 ===============================HOX2a_HOX2a -------ALFIN1       <---------ARR14(2)              <---------ANAC46 ------>ZmHOX2a(1)    --------->LBD16 ->ZmHOX2a(1)        --------->ARR14(2)         ---------->DOF2  <---------GLK1(2)<------NtERF2   ccacatctggaccgtccgattcaaatcccgaatcatcttcaaatcgctcttacagccgtagatggcagaatcctcttccccggcgtcaacatcccgatca  6352800                                                                               <---------HSFB2a(2)                                                                           ------>ZmHOX2a(2)                                                                         <---------ARR11(3)                                                                         --------->ARR11(3)                                                                        --------->YAB1                                                                       --------->ICU4                              ------>ZmHOX2a(2)                      --------->YAB1                        <---------WOX13(1)        <---------GLK1(2)  <---------ICU4                      --------->ATHB12            --------->ARR14(2) -------->HAHB4                     <---------YAB1     <-------TEIL                <---------ATHB51                 <---------ANAC58      --------->CCA1(2)            --------->ICU4         <---------At4g35610                 <---------ANAC58     --------->ARR14(2)          --------->YAB1----------->GT1              <---------WOX13(1)      <---------ARR14(2)     ----------->GT1   --------->HSFB2a(2)   aataccgtcttctcagattgctcgtgattggatcgattcagatacaactccagtttctcaaggtagtttaataatgatcttatggaaaaactctgctctt  6352900                                        --------->CCA1(2)       <---------MYB52(1)           <---------ZAT18    <---------AHL20(2)    <---------ANAC58         <---------ANAC58           --------->ZAT18 ----------->GT1          <---------ANAC58         <---------ANAC58     ------->TEIL     <------ZmHOX2a(1)<---------ARR11(3)   <---------At5g28300----------->GT1  <---------YAB1    --------->MYB59    --------->ARR11(3)  <-----------GT1 ------->TEIL          <---   acttatgaatttgtgaactagttaggatttagtaaattagagatattagtaatagcttgagttactgtttgtccatgaagcttgtgaaattgtggatgcc  6353000  Previous    Next  AGI:  At3g18500.1    Description:  similar to endonuclease/exonuclease/phosphatase family protein [Arabidopsis thaliana] (TAIR:AT1G73875.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO68025.1); contains InterPro domain Endonuclease/exonuclease/phosphatase (InterPro:IPR005135) Range:  from: 6352544    to: 6355448    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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