Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                       <----------TaMYB80                                     --------->HSFB2a(1)                                     <---------HSFB2a(1)                                     <---------GLK1(1)                                     --------->GLK1(1)                                    <---------ARR14(2)                                    <---------ARR11(3)                                    --------->ARR11(3)                    =========================HOX2a_HOX2a                    ========================HOX2a_HOX2a     <---------LBD16         ==================HOX2a_HOX2a                  ------>NtERF2         ------>ZmHOX2a(2)          --------->ARR14(2)  <---------ATERF1(1)        <------ZmHOX2a(2)           <-----------ARR10------>NtERF2        ===================HOX2a_HOX2a              <---------LBD16       --------->ARR14(2)           ------->TEIL   <---------LBD16       <---------ARR14(2)          <---------ARR14(1)--------->LBD16       <-----------ARR10       --------->MYB52(1)--------->ARR14(2)       <---------AGP1      <------NtERF2         --------->GLK1(2)      <---------CCA1(2)   ------>NtERF2          <---------ARR14(2)      <---------ARR14(1) <---------DEAR3(1)    --------->HSFB2a(1)    =======================HOX2a_HOX2a    <---------HSFB2a(2)                                 <------    ------>ZmHOX2a(2) ----------->HVH21   --------->HSFB2a(2)                            <---------ZAT6   ========================HOX2a_HOX2a------>ZmHOX2a(2)--------->DEAR3(1)        --------->ZAT18 ====   <------ZmHOX2a(2)------>ZmHOX2a(1)<------ZmHOX2a(2) ----------->HVH21         <---------ZAT14 <---   ttgagatcggatctatcgactccttcgacggcgaaacggatcttcgcgacgattccggcgactcgggatgagtcgcgctcgagtcgactgagtgttaagc  6350300                          ---------->DOF2                        --------->ANAC58                     ----------->HVH21                   <---------TGA1a                   <---------bZIP60(1)                   --------->bZIP60(1)                   <---------bZIP60(2)                   --------->TGA1a                   <---------O2                   <---------ANAC55(2)                   --------->ANAC58                   --------->ANAC58                   --------->ANAC55(2)                   ==================bZIP_DOF                   --------->O2                ----------->TGA1                                                                 ----                ----------->HVH21                                                               -----               <-----------HVH21                                                          --------->ARR14(2)            --------->ZAT14                                                               <---------ARR14(2)       ======================bZIP_DOF                                                  --------->ETT(1)       <----------DOF2  --------->ANAC58                                               <---------ANAC46 ---TOE1(3) <---------ZAT14                                                          <-----------HVH21 ============================bZIP_DOF               <---------ZAT6                 --------->LBD16 -------DOF2<---------At4g35610               --------->ARR11(3)--------->ICU4   <---------LBD16<----   ttttgtagtctttgtgctgtgacgcgacgaaagtgtctcgagagtgaagctctagagatagtggtgaagatgaattgaagaaaaccgggtcggataggga  6350400            <---------MYB46(3)           <---------ANAC46           --------->ALFIN1           <---------AtMYB61         <---------MYB46(3)        --------->ALFIN1        <---------AtMYB61      <------MYB46(1)      <------MYB83      <---------ANAC46     <---------AtMYB61     --------->MYB111(1)                                                                           --     --------->MYB46(2)                                                                          <---     --------->MYB111(2)                                                 --------->DEAR3(2)     <----     <---------MYB46(3)                                     <---------ANAC58 <---------O2 --------->MYB52(2)     --------->MYB55(2)          <-----------HVH21          <---------ANAC58 --------->O2<-------TEIL ----->GLK1(2)              <-----------HVH21 <---------ARR14(2)   --------->At4g35610  <---------MYB52(1) ---->ARR14(2)        <------ZmHOX2a(1)      <------ZmHOX2a(1)     --------->CCA1(2)  <---------HSFB2a(1) -----ARR14(2)<---------ANAC46 <---------DEAR3(2)          --------->At4g35610   <---------------AtSPL3   ttcgggtttggtggtggtgagtgaggaacgagtcgggtcgagtgagaggatagtttgtgtttgctggagagatgaaacgacgtcgagtacgttcgtttta  6350500                                     <---------ANAC46               <------ZmHOX2a(1)          ------                                   <---------MYB46(3)           <---------ANAC46               <-----                                  --------->ALFIN1             <------NtERF2                  <------                                  <---------ANAC46            ------>NtERF2                   -------                                  <---------AtMYB61          <---------DEAR3(1)          --------->ANAC58    --------->ALFIN1            <---------MYB46(3)          --------->ATERF1(1)          --------->ANAC58  <---------ANAC58             <---------AtMYB61          <---------bZIP60(1)          ---------->DOF2  <---------ANAC58             --------->ALFIN1           ----------->HVH21         --------->LBD16  <---------ANAC46          --------->ATHB12           ----------->TGA1            <---------LBD16 ------->ALFIN1        --------->ANAC58                ----------->HVH21           <---------ANAC46 ------ANAC46          --------->ANAC58    ---------->DOF2--------->bZIP60(1)     <---------LBD16   < -----TOE2(3)        <------ZmHOX2a(1)   <------ZmHOX2a(1)<---------O2   ---------->DOF2--------->GLK1(1)   ggtggagtggatagagagcgagaggaagcatcagtggtggtgaggaaaagagagagagtgacgacggcgaggagagaaagaaatcgcgggaaagccatta  6350600                                                                                              -------                                                                                              -------                                                                                              -------                                                                                              -------                                                                                              =======                                                                                              =======                                                                                              -------                                                                                              <------       <---------TOE2(3)                                                                      <------       <---------TOE1(3)                                                                      -------       <---------AtMYB61                                                                  <----------  ------>NtERF2                                 --------->ICU4                     --------->LBD16  --------->LBD16                          --------->ANAC55(2)                    <---------ANAC46 <---------LBD16                           --------->ANAC58                      <---------LBD16 --->ATHB51                                --------->ANAC58               *TSS   <---------At4g35610 ----ICU4  <-------TEIL<---------ANAC46    <---------ANAC55(2)    ----------->GT1--------->At4g35610- ---MYB52(1)  --------->CCA1(2)    ---------->DOF2    <---------AHL20(2) <---------AHL20(2)   ------- -->ICU4  <--------P  <-----------------------TaNAC69(2)  <---------AHL20(2) <-----------RAV1(1)    < ---------LBD16      <---------ZAT14   ----------->GT1--------->AHL20(2) --------->AHL20(2)   <------   tttccggcgaaggttgatatgagttaagtggaagagagaaagagtaagtaatgtttttaatttatagagagaaaaataaatgctgcggagagagtcacgc  6350700                              <--------HAHB4                              --------->AHL20(2) <------------CBF             --------->ATHB51 -->ANAC46           ----------->RAV1(1) -->O2            --------->ANAC58   --------->YAB1 -->bZIP60(2)   ---------->DOF2     <---------YAB1 -->ANAC58<-------GAMYB--------->REM1(1) =================MYC_MYB     -------->ATHB1 ==========================bZIP_DOF<-----------GT1                                              <---- -->ANAC58--------->At5g28300 <---------AHL20(2)                                              <------ ---O2  <---------ANAC46     --------->ICU4                                                 <-------- ---bZIP60(1) ----------->TBP<---------ATHB51                                              <---------YAB1 -->bZIP60(1) <---------YAB1 <---------ATHB12    <---------AHL20(1)                        <---------TOE1(3) -HVH21<---------LBD16 --------->bZIP60(2)------>ZmHOX2a(1) <-----------GT1  --------->At5g28300<---- -------->ARR14(2)--------->ANAC46<-----------GT1--------->AHL20(1)         ----------->GT1<---------TOE2(3) -->TGA1a<---------MYB46(3)--------->WOX13(1) --------->AHL20(2)    --------->YAB1     <---------DAG2 ---------GLK1(2) --------->ANAC58--------->YAB1 <---------AHL20(2)<---------YAB1      <----------DOF2 ---TGA1a----------->GT1 ------------>CBF ----------->GT1--------->ARR14(2)------>ZmHOX2a(2)---------   cagaattgctgcggttataaaagccacatcaattatttatcatcctgttaaaatatttggattcacattatcatcgatcggtaaaaaaactttatggttg  6350800                             <---------AHL20(2)                            --------->AHL20(2)   <---------AHL20(2)   --------->AHL20(1)   --------->AHL20(1)   --------->AHL20(2)   <---------AHL20(1)   <---------AHL20(1)                                            <-----------GT1 --MYB46(1)             <---------AHL20(2)                                 <---------ZAT6<---------MYB59 --P                   <---------AHL20(2)                           ----------->RAV1(1) --------->ANAC46 -MYB46(3)             --------->AHL20(2)                   <---------YAB1 <---------ANAC58        -- --MYB83             --------->YAB1                     --------->YAB1     <---------ANAC58       --- >ATHB12<---------AHL20(2)  <---------AHL20(2)         <---------YAB1      ----------->GT1    -------   gatattatattttatatatacaaaaataaattaaataagaagtcttaatctggatttatcatatgattcccaacatagcgttacatttataccgaatcaa  6350900                                                 --------->ANAC58                                                 <------NtERF2                                                 --------->ANAC58                                         --------->ATHB12     --------------->AtSPL8 ------->YAB1                           <---------YAB1      --------->GLK1(2) ------>AHL20(2)                  <---------AHL20(2)---------->DOF2 <----------DOF2 -->AHL20(2)  ----------->GT1 <---------ANAC46  ------>NtERF2 <---------------AtSPL8--------->ANAC46   ataaaaatttagacaaatgtaatttgagaattgtgtttatttgttattggcaccgaaagaagaatttgtactttgtagaattcaacacaaaactatagca  6351000              --------->SPL1(2)              --------->SPL7                                     <---------AHL20(2)             <---------SPL1(1)                                --------->AHL20(2)             --------->SPL1(1)                         ------>MYB83            <---------SPL7                             ------>MYB46(1)            <---------ZAT14                          <---------MYB59          <---------REM1(2)          <---------------AtSPL3                  <-----------GT1--------->AHL20(2)            ------         <------------------SPL14        --------->CCA1(2)    <---------AHL20(1) --------->ANAC58     --------->ZAT14                    <---------ARR14(2)    --------->AHL20(1) --------->ANAC58     <---------ZAT14                    --------->ARR14(2)   <---------AHL20(2)  --------->ANAC46   <   tagtgtctgtagtctgtacggacgagagtagaaactgtagaagatagggatttgacctactaaatattttaatacaagtctacaagcgattatccaatat  6351100                                                       <----------DOF2                    --------->ZAT14               ----------->HVH21     <---------HSFB2a(2)                  --------->ATHB12                                       ----     ------>ZmHOX2a(1)   --------->ZAT14  <---------ICU4                  ------>ZmHOX2a(1)      <---     --------->HSFB2a(2) <---------ZAT14  <---------AHL20(2)     --------------->AtSPL8         ----- --->YAB1    --------->ALFIN1            <---------AHL20(2)     ---------->DOF2               <------ ---------At4g35610 <---------ZAT14   <---------AHL20(2)     --------->CCA1(2)     <-----------GT1   taagctcctagagatgtgtgactacagagtacttaagtgtttatttattgcaatgacctttggatacaaagtactcctatattgttaaccaattcacttt  6351200  Previous    Next  AGI:  At3g18490.1    Description:  aspartyl protease family protein. similar to aspartyl protease family protein [Arabidopsis thaliana] (TAIR:AT1G25510.1); similar to unknown [Populus trichocarpa] (GB:ABK94105.1); contains InterPro domain Peptidase aspartic, catalytic; (InterPro:IPR009007); contains InterPro domain Peptidase A1; (InterPro:IPR001461) Range:  from: 6348761    to: 6350674    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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