Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                       =============MYC_MYB                                                                                     ================                                                                              --------->YAB1                                                                              <---------ICU4                                                                             <---------ATHB12                                                                           --------->WOX13(1)                                                                       ------>ZmHOX2a(2)                                                                      <---------GLK1(1)                                                                      --------->GLK1(1)                                                                      <------ZmHOX2a(2)                                                                     <---------AGP1--------->ANAC55(2)                                                                     --------->AGP1<---------ANAC55(2)                                                                     --------->ARR14(3)                                                                     --------->ARR14(2)                                                                     --------->ARR11(3)                        >>>>>>>>>WRKY18                              <---------ARR11(3)          ----                    --------->ATHB12                                 <---------ARR14(2)      --------                    -------->ATHB1                                  --------->At4g35610   <-------GAMYB                    <---------ICU4           ===========================HOX2a_HOX2a--------->ANAC46 -----ICU4---------->DOF2<---------TOE2(3)   <------ZmHOX2a(1)      <---------CCA1(2)--------->TGA1a --->AHL20(2)      <---------YAB1            =================================HOX2a_HOX2a----------->GT1 ----AHL20(2)      <---------ATHB12          ================================HOX2a_HOX2a <---------MYB46(3) --->AHL20(1)      --------->ICU4           ----------->GT1      <------ZmHOX2a(2) --------->ANAC58 -->AHL20(2)     --------->GLK1(1)        <---------LBD16       <-----------HVH21  --------->ANAC58   attacaagaagaaaaagagaaatcattgacgaagaagactgtaaccaggataaaaacaaatgtgccgatcagatctccaatcatcacgcgtctgttaata  6305600                                                                                         ----------->HVH21                                                                                         <---------SPL7                    --------->ARR11(3)                                                  --------->TOE2(1)                    <---------ARR11(3)                                           --------->ANAC58           --------->ANAC46                                                      --------->ANAC58         <---------DOF5.7(2)                                                  <------NtERF2        <---------WRKY45                                                     ------>NtERF2 --------->SPL7        <---------WRKY12<---------ANAC58                                    <---------RAP2.6(2)        <---------WRKY38(1)                   ----------->GT1               <---------ATERF1(2)   --- ==========================bZIP_DOF         <---------ZAT14                 --------->ATERF1(2)  <--- ----->GLK1(2)  ---------->DOF2     ----------->HVH21                       <---------DEAR3(1)   <--- ->YAB1<<<<<<<<<WRKY6   <---------ANAC58    --------->ZAT14           --------->YAB1    --------->TOE1(1)   atctgaatagtcaacgctaaaagatgtcttgagtctgtctgaccagtgaagtaaactactactacttgtcaataagaggcggcaagcacatcggacggtc  6305700                       <-----------HVH21                   --------->MYB52(1)                           <---------ANAC58                 <---------YAB1               --------->ARR11(3)<---------ANAC58          <---------MYB52(1)                  <---------AHL20(1)<---------ANAC46        --------->AHL20(2) --->ZmHOX2a(1)--------->YAB1              --------->AHL20(2) --------->ZAT14   ---------->DOF2 ------ANAC58  --------->AHL20(2) <----------DOF2             <---------ZAT14  --------->AHL20(2) ------ANAC58 <---------YAB1  <---------CCA1(2)               --------->ZAT18  <---------AHL20(2)   cttgttttccctgttaattataaacggtcaccatctctttagacataatatatactactagtagtggagtgtttttgttaattaaagtgattaaacacca  6305800                                     <---------AHL20(2)                                     <---------ARR11(3)                <-----------GT1                                     --------->AHL20(1)             <---------YAB1                                     <---------AHL20(1)             <---------AHL20(2)                                     --------->AHL20(2)            <---------AHL20(1)       ---------                                     --------->ARR11(3)         --------->YAB1          <----------DOF2                               --------->At5g28300             <---------YAB1        <-----------GT1                 ----------->GT1    --------->AHL20(2)       --------->YAB1    <---------AHL20(2)   -              ---------->DOF2 ----------->GT1               <---------YAB1 <----------DOF2 <---------YAB1   attctaggtgttaaccaaaagataaaacgatacagtaaatatattcttgtgaattctatagtatcataatattattccttttttatttcacttttgataa  6305900                                   <-----------GT1                                  --------->KAN4(2)                                 --------->KAN4(1)                                 <---------KAN4(1)                               <---------GLK1(2)                          --------->TOE2(3)    <---------ARR11(3)   --------->ATHB12            <---------TOE1(3)    --------->ARR11(3)  <---------YAB1               <---------TOE2(3)  <---------AHL20(2)   <---------ARR11(3)  <---------AHL20(2) --------->AHL20(2)    --------->ARR11(3)  --------->AHL20(2)                     --------->YAB1 >YAB1                --------->CCA1(1)    ----------->TBP       <---------YAB1  *TSS ---------->TBP       --------->RVE1(1)<----------DOF2----------->GT1     <----------DOF2   ctataaaatctttggcaaactaaaatatcattagattattcctttttaaatagctaaggtataatttctgatttagctttgctatcacaatgttcaattt  6306000                                                                  ------>ZmHOX2a(2)                                                                  ----------->GT1          --------->DOF5.7(2)                                    <------ZmHOX2a(2)          <---------MYB52(1)                                    <---------ARR11(3)         <-----------HVH21                                   <------ZmHOX2a(1)       <-------TEIL                                 ----------->GT1       ------>ZmHOX2a(2)                            --------->ANAC58      --------->ARR14(1)                            --------->ANAC55(1)      <------ZmHOX2a(2)                             --------->ANAC58     ------------>MYB.PH3(1)                <---------ARR14(2)  --------->ARR11(3)     <---------ARR11(3)                     --------->ARR14(2) <---------GLK1(1)     --------->ARR14(2)           <-----------HVH21 --------->ANAC55(2)  <---------ANAC58     <---------ARR14(2)        --------->ZAT2       --------->ANAC46     <---------ANAC58      <-----     --------->ARR11(3)        --------->At4g35610  <---------ANAC55(2)--------->ICU4     <---------DAG2 ---------->DOF2              --------->GLK1(2)<---------ETT(1)--------->GLK1(1)          <----------DOF2   gtctaaagatccgttacctctctatgcgagagaagctgtgagagagtttccgacaagtaactaggagatcgtaattcttgtctgaaaaacaacttttttt  6306100                                                                      --------->GLK1(1)                                                                      <---------GLK1(1)                                                                     <---------ARR14(2)                                                                     <---------AGP1                                                                     --------->ARR11(3)                                                                     <---------ARR11(3)                                                                     --------->ARR14(2)                                                                    <---------CCA1(2)                                                                  --------->ALFIN1                 --------->ARR11(3)                              --------->LBD16                 <---------ARR11(3)          ---------->ID1 ----------->HVH21           ----------->HVH21       --------->LBD16          --------->MYB46(3)    <---------HSFC1(2)            --------->HSFB2a(2)       <---------MYB55(2)    --------->HSFC1(2)            <---------HSFC1(1)       --------->ANAC46       <-------GAMYB    <---------HSFB2a(1)           <---------HSFB2a(2)   --------->ZAT18          <---------MYB46(3)    --------->HSFB2a(1)          <---------LBD16 <<<<<<<<<TBF1<---------At5g28300--------->MYB52(2) ----AHL20(2)    <---------GLK1(2)--------->HSFC1(1)    <---------ZAT18------>ZmHOX2a(2)   attcgaaacttctctcacagatttttctcagtttttccagaaattttgttcttcttcgtccactcaccgtggatctctctagtttgttgaagaaatcaaa  6306200                                                                                                 ----                                                                                                -----                                                                                                <----                                                                                        --------->LBD16                                                                                       --------->HSFB2a(2)                                                                                       --------->ANAC46                                                                                       <---------HSFB2a(2)                                                                                       --------->LBD16                                                                                      <---------HSFB2a(2)                                                                                      <---------LBD16                                                             --------->WRKY45         ---------------                                                             --------->WRKY12         --------->HSFB2a(2)                                                             --------->WRKY38(1)--------->ARR11(3)                         --------->AHL20(2)   <---------ANAC58       ---------->DOF2 <---------LBD16               xxxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)        ----------->HVH21  <---------ARR11(3)               --------->MYB52(1)      ---------->DOF2     <----------DOF2      <---------ARR14(2)          --------->AHL20(2)        --------->ANAC58  <-----------TGA1          --------->ARR14(2)  <         --------->AHL20(2)         --------->ANAC58  <-----------HVH21   <----------DOF2  ----------     --------->AHL20(2)  <---------AHL20(2)   <---------ANAC58  -------->ZAP1   <---------GLK1(2)<---   ttgtggaataaataaaaaaacagagaaataaatactgcaaggaaagtttcttacttcgtcactttgacccagaaagctttcagattttcccggaaaagaa  6306300                  <---------WRKY18(1) --------->At4g35610 --------->ZAT2  --------->WRKY38(1) <---------At4g35610 ----->ARR14(2)  --------->WRKY12 ---->GLK1(1) --------->ATHB12                                                ---------->DOF2 -----GLK1(1)<---------AHL20(2)                                       <---------DEAR3(1) >AGL15      <---------YAB1     <---------GLK1(1)                     --------->ETT(1) -----------RAV1(1) <---------WOX13(1)                              <-----------HVH21    <---------ARR11(3) >DOF2  xxxxxxxxxxxxxxxxxxx>smallRNA(si3)                      --------->CCA1(2)    <------ZmHOX2a(1) ------ARR14(2) <---------WOX13(1)                     --------->GLK1(2)<------NtERF2---------->DOF2<   atctgctggagaaatttcattgactgacttatggatttgtgaagaagcttgaaggcgaatcgaagagatgggtcggagaataaagaggaaaggtctgata  6306400      --------->At4g35610      <---------ZAT2      --------->ZAT2                                                  <---------AtMYB61      <---------At4g35610                                     <---------MYB46(3) --------->ANAC46                                           <---------ANAC58 --------->ANAC58          --------->YAB1                   <---------ANAC58 --------->ANAC55(2)      <---------ATHB12                  <---------ANAC46 --------->ANAC55(1)    --------->WOX13(1)             <-----------RAV1(1) --------->ANAC58  <---------AHL20(2)               <-----------RAV1(1) <---------ANAC55(2)  <---------YAB1 <---------ANAC46<-------GAMYB  <----------DOF2           ------- ---------LBD16  --------->GLK1(2)  --------->At4g35610<---------MYB46(3)       <----------DOF2   aacacggaagctgcaagagaatttatcaatcatctagttgctgagaggcattcgctgttgttgctggttcctttggtcttagctttctgggcaattgaaa  6306500  Previous    Next  AGI:  At3g18370.1    Description:  ATSYTF/NTMC2T3/NTMC2TYPE3/SYTF. similar to ATSYTD/NTMC2T2.2/NTMC2TYPE2.2/SYTD [Arabidopsis thaliana] (TAIR:AT5G11100.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN72583.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO49328.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO68069.1); contains InterPro domain C2 calcium-dependent membrane targeting (InterPro:IPR000008); contains InterPro domain C2 calcium/lipid-binding region, CaLB (InterPro:IPR008973) Range:  from: 6305981    to: 6310626    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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