Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                             ------>NtERF2                                                                          --------->DEAR3(1)                                                                       ------>ZmHOX2a(2)                                   --------->ARR14(2)                 <------ZmHOX2a(2)                 <-----------GT1   <---------ARR14(2)               ------->GAMYB   <----------DOF2                <---------CCA1(2)                --------->MYB46(3)<---------ALFIN1  <---------ANAC58              --------->YAB1              --------------------->WRI1         ------  <---------ANAC58    <------ZmHOX2a(1)   --------->YAB1   --------->MYB52(2)      <------ZmHOX2a(2) >DOF2          <---------YAB1 <---------YAB1 ---------->DOF2    <-----------GT1  --------->ARR14(2)   catggctttgtagctcttatcacaggacttgttatcatatccaagaataaaagtcataccttcgttgtaacgatcgccgagttcgatccacttggttaca  6290000                                            <-------TEIL                                         <------MYB46(1)                                         <---------At4g35610                                         --------->At4g35610                                        <---------DEAR3(1)                                        --------->ALFIN1                                        <---------AtMYB61                                     --------->HSFB2a(2)                                     <---------HSFB2a(2)            ---------->DOF2             -----                                    <---------LBD16         ----------->HVH21                   <----                                   <---------LBD16     --------->ANAC58                      --------                                <----------DOF2        --------->ANAC46                      --------   ---------->DOF2           ------->TEIL<------MYB83  --------->ANAC58                      <------- --->REM1(1)                <---------CCA1(2)     <----------ID1 --------->At5g28300         <-------   ccagttaaagggttccaaacgacttatcttgaatcttttcgggaggtgcataacaacaagccatcacagtgaaagactcgatctatattgaactgagctg  6290100                              <---------bZIP60(1)                              --------->bZIP60(1)                           ----------->HVH21                   <---------ANAC46                           --------->WRKY12                    <---------AtLEC2                         --------->ZAT2                   <---------MYB46(3) --------->GLK1(1)       <---------ZAT2                  --------->ALFIN1 ---->At4g35610          --------->At4g35610             <---------AtMYB61               <---------ARR14(2) -----At4g35610   ------>ZmHOX2a(2)                    <---------ANAC58             <------ZmHOX2a(1) ->At4g35610    --------->ARR14(2)            --------->HSFB2a(2)          <---------ANAC46   <------ ->ZAT2         <---------ARR14(2)      <-----------GT1<---------ANAC58   <---------TOE2(3)  ------>ZmHOX2a(1) --ZAT2  <---------ZAT6  <---------At4g35610  <---------HSFB2a(2)--------->AtLEC2  <----------ID1 --- --At4g35610   <------ZmHOX2a(1)       <-----------GT1 <---------ANAC46<---------WOX13(1)--------->ARR14(2)   ctgaattcttagagtgaggatcgagtaagctgacctcatttttaacctctagagatggagtggttccatggagattgacgtttataggacaaatcctgta  6290200                                                           <---------ARR14(2)                                                           --------->ARR14(2)                                                           <---------ARR11(1)                                                           --------->GLK1(2)                                                           <-----------ARR10          <-----------HVH21                                ------->TEIL         --------->O2                                     <---------ARR14(1)      <---------WRKY45              <---------DAG2        <---------CCA1(2)      <---------WRKY12              <----------DOF2     <---------ANAC58      <---------WRKY38(1)       <---------RAP2.3(2)     <---------ANAC58     --------->WRKY18(1)        <---------RAP2.6(2) <---------ANAC58            <-----------GT1 ---MYB52(1)                <----------DOF2         <---------ANAC58    <----------DOF2      ------>ZmHOX2a(1) ------>ARR11(3)----------->GT1<---------LBD16   <----------DOF2      <---------YAB1         ========   gttcttggtcaacgtgagaggttgaaactgctttgcggctttttcaatgtgctttcttgcgaatctcttgtcatctttgaataaacgattccatcctttg  6290300                                                                                 --------->TOE2(3)                                                                                 <-----------TGA1                                                                                --------->ANAC58                                                                                --------->ANAC58                                                                              <---------DOF5.7(2)                                                                           ------>NtERF2                                                                           --------->LBD16                                                                          <---------ETT(1)                                                                         <---------LBD16                               <------NtERF2                           <---------ARR14(2)                              --------->LBD16                          --------->ARR14(2)                              <------NtERF2                           <---------HSFB2a(1)                             --------->RAP2.6(2)                      --------->HSFB2a(1)                            <---------ANAC46                          <---------HSFC1(2)                            <---------LBD16  <---------ARR11(3)       --------->ZAT2 --------->ICU4      --------->YAB1   <---------REM1(1)     <---------ARR14(2)       <---------At4g35610      ------>ZmHOX2a(2)<-----------RAV1(1)   --------->GLK1(2)        --------->HSFC1(2)    <---------ARR14(2) <---------bZIP60(2)   <-----------ARR10        <---------ZAT2 <---------YAB1    --------->ARR14(2) --------->ALFIN1      --------->ARR11(3)       --------->At4g35610 --------->ALFIN1      <---------O2  --------->MYB52(1)        ------>ZmHOX2a(1)--------->bZIP60(2) ============HOX2a_HOX2a --------->ALFIN1    --------->ARR14(2)--------------------->WRI1        ----   caagtggatcgtaatcgcttcagagatgtggccggaacaaaacagagtatctcttctactaaatcctttggaagctccggcaacgtcatttttgatcact  6290400                                   <----------DOF2                                   --------->GLK1(1)                                             <---                        <---------AHL20(2)                                                  <--------                  ------------>CBF<---------ANAC58                     <----------DOF2   --------->YAB1     <----------ID1    --------->AHL20(1)                            <-------TEIL--------->TOE2(3)    --------->RAP2.6(3)<---------AHL20(1)                --------->MYB52(1)      --------->TOE1(3) <-   --------->MYB52(1)  --------->AHL20(2)  <----------DOF2        <---------ANAC46  --------->AHL20(2) ----->ZAT14--------->ALFIN1      <---------ANAC58     <---------ARR11(3)     <---------ZAT18    ----   gaagaaaacggcaagtggctctcaatataatctagggctttccatctttcatttcaagataactggttatgtgcatttagttcccttaaaattataactt  6290500                                                                      ----------->RAV1(1)                                                                    <------NtERF2                                                                    --------->At4g35610                                                                   --------->ANAC58                                                                   --------->ANAC58                                                                   ------>NtERF2                                                                   --------->ANAC46 --------->LBD16                                                  <---------ATERF1(2) ----------->GT1            <---------ARR14(2)                    --------->ATERF1(2) --------GT1                --------->ARR14(2)               <---------At4g35610 ---GT1      --------->YAB1<------ZmHOX2a(1)                 --------->At4g35610     <---------MYB52(1) --------LBD16  <---------ICU4                           <----------DOF2        --------->MYB52(1) ----->MYB52(1)------------>CBF                          <---------DAG2    ----------->RAV1(1)   aaccggataaaccgataatcaataccaaaggatttggataagtttttttgagtcactcactttatctgccagcaacacaacaaaaccgataagttttggc  6290600                                      <---------HSFC1(2)                                      --------->HSFC1(2)                                      <---------HSFB2a(1)                                      --------->HSFB2a(1)                                     <---------ARR14(2)                                     --------->ARR14(2)                                     --------->GLK1(2)                                     <---------ARR11(3)   ------>ZmHOX2a(2)                             --------->YAB1               ==============================HOX2a_HOX2a                            <---------YAB1               --------->GLK1(1)                           <---------ARR11(3)            <---------GLK1(1)                          --------->CCA1(1)             ------->TEIL                          --------->RVE1(1)             <---------ARR11(3)                     <-----                      --------->AHL20(1)           --------->MYB52(1)                 <----------DOF2                ------>ZmHOX2a(1)    --------->ARR11(3) <---------AGP1           ------>ZmHOX2a(1)             ---------->ID1--------->ARR11(3)     <---------AHL20(2)            --------->ANAC55(2)   --------->ARR14(2) --------->AHL20(2)      --------->AHL20(2)------------>CBF--------->TOE1(3)   <---------ARR14(2) <---------AHL20(2)     <---------MYB52(1) <---------YAB1  <---------ANAC55(2)  <---------GLK1(2)--------->YAB1   <---------GLK1(2)   --------->ARR11(3)      --------->TOE2(3)   cttagaatcccccttgtcctaaaataaaatatcatcaagaatcttccattaattaatggatctcttatcaatagatttagttccttaactttaagttgtg  6290700                                                        <----------DOF2                                                       <---------ANAC58           ---------->DOF2                                                       <---------ANAC58       <----------DOF2                                       ----------->RAV1(1)   <---------ZAT6   --------->TOE2(3)   <--                           --------->YAB1          <---------WOX13(1)      <---------ARR11(3)     ---                        --------->WOX13(1)      --------->ICU4             --------->ARR11(3)    ----        --------->CCA1(2) <---------ATHB12      <---------YAB1     --------->ARR14(2)            <--- ----ANAC46  ----------->GT1   <---------AHL20(1)--------->ATHB12  <---------ARR14(2)  --------->ZAT18   tatttgtaagatagagagaaaaacaccaattagtatatttgcaacatagcatgattggctttagtggtagaaccgaagaactttaaaagtgaacgagtga  6290800                               ---------->DOF2                                          <----------DOF2 -------ICU4              <---------ANAC46                                              <---------DAG2 ------>ATHB12            <---------ANAC58                       <----------DOF2   ------->TEIL ----->ICU4               <---------ANAC58                  ---------->DOF2    <---------TOE2(3)  <-- ------YAB1      ----------->GT1  --------->YAB1   --------->MYB52(1)        <---------AHL20(2) <----   tgatttctagttgtacaacttgtaacttgggtgtaaagataactcagagaaaataccagtagaaaagctttgttcatgtttaatgaatcacttttgttaa  6290900  Previous    Next  AGI:  At3g18320.1    Description:  F-box family protein. Identical to F-box protein At3g18320 [Arabidopsis Thaliana] (GB:Q9LS58); similar to F-box family protein [Arabidopsis thaliana] (TAIR:AT3G44120.1); contains InterPro domain Cyclin-like F-box (InterPro:IPR001810); contains InterPro domain F-box associated type 1 (InterPro:IPR006527) Range:  from: 6289233    to: 6290389    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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