Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                             --------->MYB52(1)                          --------->AtMYB61                 <---------ANAC46                 <---------ANAC58              ----------->HVH21     --------->SPL7      <---------MYB55(2)   <---------SPL7<---------ANAC58 -----HVH21   <---------MYB52(1) --------->ARR14(2) -----TGA1   --------->LBD16    <---------ARR14(2) ->bZIP60(2) <-----------HVH21--------->LBD16            --------->ANAC58             ----------->GT1 ->ANAC58   <---------ANAC55(2) <---------GLK1(2)        --------->ANAC58  --------->MYB52(2) ->ANAC46   --------->ANAC55(2) --------->ARR14(2)   --------->ANAC58    <--------P--------->ALFIN1 ->ANAC58   --------->ANAC46<---------LBD16          --------->ANAC58 <---------TOE2(3) ---STF1 ------->TEIL    --------->MYB46(3) ---------->DOF2           <---------TOE1(3)   accttcgtccgaacccgtgacttgtaaaccaccggaatctccataagaaagcagcaagaacccaatttgatcaaggttagtccctgtggggaaaaacacc  6286800                                                                    <---------SPL7                  <                    --------->DAG2                              --------->YAB1                     <-                  ---------->DOF2                          ------->GAMYB  <---------ARR14(2)       <-              <---------LBD16                <------ZmHOX2a(1) <---------YAB1                     ---          <-----------GT1          <------NtERF2        --------->MYB52(1)--------->ARR14(2) <------ZmHOX2a(1)       <---------ICU4----------->GT1  <-------GAMYB  --------->TOE1(3)<---------LBD16  ---------->DOF2   aagactgaatttttactggggaaaggtagaaactggaggcgattgtaggagagaaccctaacggtatcatcgtgcggattggaaattttaaaagaggaat  6286900                              ----------->HVH21             ----------->HVH21<---------ARR14(2)          --------->ARR14(2)  --------->ARR14(2)          --------->GLK1(2)  <------NtERF2          <---------ARR14(2)--------->LBD16        <---------HSFC1(2)--------->ATERF1(1)        <---------HSFB2a(1)<---------ANAC46        --------->HSFC1(2)<------NtERF2        --------->HSFB2a(1)--------->DEAR3(1)    --------->LBD16       <---------LBD16   <---------ANAC55(2)   ------>NtERF2                   --------->ANAC55(2)   <---------ANAC58      <---------ATERF1(1)           <---------ZAT14   <---------ANAC46     <---------DEAR3(1)       --------->LBD16   <---------ANAC58     --------->ANAC58       --------->LBD16  <---------LBD16       --------->ANAC58       <---------LBD16 ---------WOX13(1)     --------->SPL7        <---------LBD16 --------ANAC58      <---------SPL7       ---------->DOF2<---------ANAC55(2) --------ANAC58      ----------->HVH21   <---------ARR14(2)     ----------->GT1            --------->ALFIN1 ------>ATHB12--------->MYB52(1)         --------->ARR14(2)   <---------ANAC46      <------ZmHOX2a(1)   tgattgcggaagaatccgacggagggacgccggagacggagagaaaacgcgcgggagttaagtgaggggtaatagagagaattggaggagagagtgaggg  6287000                                                         --------->HSFB2a(2)                                                         <---------HSFB2a(2)                                               <---------ATHB12                                             --------->MYB52(1)     ----------->HVH21                                          <<<<<<<<<<<<<<<<<LFY   --------->ALFIN1                     ----------->HVH21    >>>>>>>>>>>>>>>>>LFY  <------ZmHOX2a(1)               <---------ANAC58          <------ZmHOX2a(1)    --------->ALFIN1               <---------ANAC58      ---------->DOF2    <---------LBD16           <---------ZAT2      --------->HSFC1(1)      <---------LBD16           --------->At4g35610 --------->HSFB2a(2)  <---------HSFB2a(1)           <---------ANAC58           <---------At4g35610 <---------HSFB2a(2)  <---------HSFC1(2)            <---------ANAC58           --------->ZAT2      <---------HSFC1(1) <---------GLK1(2) --------->ALFIN1   agaagagaagagcagctgcgagtctgatgggttcgagaagaaaggaccaatggattcttcgggagaggaggtgatgcagagtttgcgtccccattcatcg  6287100                                                                           --------->AHL20(2)                                                                        <---------AHL20(2)                                                                        --------->AHL20(2)                                                                       --------->AHL20(2)                                    <---------ANAC46                   <---------AHL20(1)                                   --------->ATERF1(1)            ------------>CBF                                  <---------RAP2.3(1)            --------->ANAC46                                  <---------ERF1                --------->RAP2.3(1)                                  <---------DEAR4(2)            <------NtERF2                                  ------>NtERF2                <---------RRTF1(1)                                  <---------ATERF1(1)          <---------ATERF1(1)                                 <---------RAP2.3(2)           <---------DEAR3(2)                                 <---------RAP2.3(3)           <---------ERF1                                 --------->ATERF1(2)           <---------ORA47(2)                                 <---------DEAR3(1)           <---------RRTF1(2)                                 <---------ATERF1(2)          <---------RRTF1(3)                                 --------->DEAR3(1)           <---------DEAR4(1)                                <---------ABI4(1)             <---------RAP2.3(3)                                <---------LBD16               <---------DREB2C(2)                                --------->ATERF1(1)           <---------At1g77200                              <---------DEAR3(1)              --------->ETT(1)                              ------>ZmHOX2a(2)      <---------MYB52(1)<---------AHL20(2)                             <------ZmHOX2a(2)     ----------->GT1------>NtERF2                            --------->ARR14(2) --------->ATHB12<---------RAP2.3(1)                            <---------ARR14(2)--------->ICU4  <---------DEAR3(1)          <---------MYB52(1)         --------------------->WRI1<------NtERF2  ------>ZmHOX2a(2)<------NtERF2      ------->TEIL    --------->At4g35610    --------->GLK1(1)  <---------YAB1  <---------RAP2.3(2)--------->CCA1(2)  --------->YAB1           <---------GLK1(1)--------->YAB1   --------->DDF1<---------AHL20(2)  <---------ICU4          ----------->ARR10 <---------ICU4   --------->RAP2.6(3)--------->ARR11(3) --------->ICU4       <---------LBD16      <---------ATHB12 <-----------HVH21   <---------AHL20(2) <---------ATHB12   ----------->HVH21      --------->ICU4  <-----------RAV1(1)  <---------AHL20(1)   gtaatcatctccatagggttcttcgacggagatcggcggcgagtaatcatgatcggttaatatgtcggcgcaatttttttaatatatggaccgttttggt  6287200                                                                                       ------------>CBF                                                                                     ------>MYB46(1)                 ----------->GT1             ------->TEIL                            ------>MYB83         --------->MYB52(1)               <---------REM1(1)                        <---------MYB59         ------>MYB83                    --------------->AtSPL8          --------->TOE1(1)         ------>MYB46(1)             <------------CBF                    --------->TOE2(1)       ------->GAMYB              --------->AHL20(2)                    --------->HSFB2a(2)       <---------MYB59            <---------AHL20(2)        <---------ATHB12       --------->AtMYB61    <---------DOF5.7(2)         <-----------TBP         ------------>CBF<---------HSFB2a(2)      ----  --------->DOF5.7(2)     <xxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)--------->YAB1 --------->SPL7      <----   tctcgttaaccgaaccgagatgtaatttggacggatttatattgttgtacctgaataaaccaataacaaaatttctcgtacagaaccaaaccaataggta  6287300                                     --------->ATHB12                                     <---------ICU4                                     -------->ATHB1                                     --------->YAB1                                    <---------YAB1                            --------->YAB1                                                      <----             --------->ARR14(2)    --------->GLK1(2)                                            -----             <---------ARR14(2)   --------->YAB1 --------->CCA1(2)           --------->DAG2    <-----             --------->ARR11(3)--------->YAB1   <---------ARR14(2)     <---------TOE2(3)       <-----     <---------DOF5.7(2)  <---------AHL20(2)    --------->ARR14(2)     <---------TOE1(3)       <-----   <---------MYB52(1)     --------->AHL20(2) <---------TOE2(3)      <---------YAB1             <-----   --------->DOF5.7(2)   --------->YAB1      <---------TOE1(3)   --------->ICU4        <----------DOF2 ----->DEAR3(2)         ----------->TBP   <---------YAB1        <------------CBF       <---------DAG2 -----At5g28300     <---------WOX13(1)<------------CBF        <---------YAB1---------->DOF2    <-----   ccgtcgttaatggcagaacttgatttataaaaataagaatcattgttatggatacgacgattttgtcattgttatggataaagctctaactttatttgct  6287400                                                  <------ZmHOX2a(2)                                                 --------->ARR11(3)                                                 --------->ARR14(2)                                                 <---------ARR14(3)                                                 --------->ARR14(3)                  ---------->ID1                                                 <---------ARR11(3)              <---------ANAC58                                                 <---------ARR14(2)              <---------ANAC58                                                 <---------GLK1(2)          --------->HSFB2a(1)                                             --------->YAB1                 <---------HSFB2a(1)  <---------HSFB2a(2)                   ------------>CBF                    --------->HSFC1(2)  --------->HSFB2a(2)                  --------->ANAC58                     <---------HSFC1(2)  <---------HSFC1(1)                   --------->ANAC46                    --------->ARR14(2) <---------LBD16                       --------->ANAC58                    <-----------ARR10       == -----------AGL15                   --------->ZAT14                        <---------ARR11(1)      <- ---------->AGL15                   <---------ZAT18                        <---------ARR14(2)     --- ------------AGL3        ------->TEIL  --------->ANAC55(1)                 ------->TEIL           <-- ----ANAC58     <---------AHL20(2)  <---------ZAT14  ------>ZmHOX2a(1)    <---------ARR14(1)    <---- ------------AGL1       <---------CCA1(2)   --------->ICU4       --------->TOE1(3)   ---------->ARF1 ----ANAC58 --------->YAB1     <----------DOF2 ----------->ARR10 --------->TOE2(3)  <-----------HVH21 ------------AGL2 <---------AHL20(2)--------->ZAT18------>ZmHOX2a(2)      <---------CCA1(2)   -------   tattctggaaactttcatattattttgaatcttctttgtgcacgcaattaagatcctctccttgctaccttaattcgaatcttccttgtcgcacaattaa  6287500             --------->MYB46(3)            ------>MYB46(1)            ------>MYB83         --------->MYB46(3)        ------>MYB46(1)        ------>MYB83       ==========================HOX2a_HOX2a       ------>ZmHOX2a(1) =============HOX2a_HOX2a                      --------->GLK1(2) -----ZmHOX2a(2)                            <---------TOE2(3) ------>ARR11(3)                            <---------TOE1(3)          <---------ZAT2--------->WOX13(1) -------ARR11(3)                      --------->LBD16                  --------->At4g35610 -----YAB1 ----------->RAV1(1)      <---------LBD16                    <---------At4g35610 -->YAB1-------->P        ------>ZmHOX2a(2) --------->DAG2    <-----------GT1      <------ZmHOX2a(2)   gatcacatcctaccaacaaataatgtgatcgtatcaaatgcggaataaggttctgagaaagttttaagcactcagctcttaagcgatcaatccaacaaga  6287600                          --------->RAP2.6(2)                        <---------At4g35610                        --------->At4g35610                        --------->ZAT2                        <---------ZAT2                     ------>ZmHOX2a(1)                    --------->TOE2(3)                 <---------ARR11(3)                                           <---------MYB52(1)                 --------->ARR14(2)                                    <---------ZAT2                 --------->ARR11(3)                                    <---------At4g35610           <---------HSFC1(1)                       --------->CCA1(2)  --------->At4g35610 --------->AHL20(2)           --------->HSFB2a(2)                    --------->YAB1       --------->ZAT2     --------->AHL20(2)           --------->HSFC1(1)                  ---------->DOF2  <---------DAG2--------->ICU4           <---------HSFB2a(2)       --------->ATHB12           <----------DOF2  <-----------RAV1(1) <-----------GT1 <---------ARR14(2)<---------WOX13(1)    <----------DOF2 --------->RAP2.6(2)   ttaatacactcttctagaaaatcctcagcagccatggattgatttcaaacaaagataagctttacactttttcagcagccattatgttgcaaataaaaaa  6287700  Previous    Next  AGI:  At3g18310.1    Description:  similar to hypothetical protein [Vitis vinifera] (GB:CAN64638.1) Range:  from: 6284362    to: 6287150    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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