Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                      --------->ANAC46                                                                                    --------->ANAC58                                                                         <---------YAB1                                                                        --------->AHL20(1)                                                                       <--------HAHB4                                                                       --------->ATHB51                               <---------ARR11(3)                      --------->YAB1                               --------->ARR11(3)                      -------->ATHB1        <-------TEIL     --------->TGA1a                               <---------ICU4    --------->ARR11(3)   <---------TGA1a                               --------->AHL20(2)    <---------ARR11(3)   <---------O2                                  <---------AHL20(2)   --------->YAB1 =================bZIP_DOF         --------->TOE2(3) <---------ATHB51  <---------YAB1  ---------->DOF2                  ----------->GT1    <---------ATHB12             -- -----GT1--------->YAB1  --------->O2      ------->TEIL <---------YAB1--------->ICU4--------->ANAC58   ccatatgatattcatcaagtcaaagtcacgagagttcttaatatgcatccacattgttaatattccaatgcaattattttagttataagcaatattcaaa  6266700                                                                                        <---------MYB111(1)                                                                                        <---------MYB55(2)                                                                                        --------->MYB46(3)                                                                                        --------->AtMYB61                                                                                        <---------MYB111(2)                                                                                       --------->ANAC46                  <---------YAB1                                           ---------->DOF2------>MYB83                <---------ANAC58                                       --------->REM1(1)<---------MYB46(2)           <---------AtLEC2                                      --------->MYB46(3) --------->MYB46(3)   --------->AHL20(2)                      ---------->DOF2     <-----------GT1 <-----------HVH21   <---------AHL20(2)                ----------->GT1     <----------DOF2  --------->AtMYB61 ------->ATHB12 <---------ANAC58  <---------AtLEC2    <---------ARR11(3) --------->ANAC46 ------>MYB46(1)   ttgatttaaatttggatggcatgatactatacgaatgcatgataaaaaagcatcgagctctttattaacaactacaccaaaggtcatccaccaaacttgt  6266800                                                                                            ---------       <---------AHL20(2)                                                                 --------->ZAT18       --------->YAB1                                                                     --------->ZAT14       --------->AHL20(2)                                                                 <---------ZAT14      <---------YAB1                                                               --------->ANAC58    <---------ICU4                                                                 --------->ANAC46    --------->YAB1                                                                 --------->ANAC58   --------->ICU4                                        --------->ANAC58  --------->ZAT18<---------ZAT18   <---------YAB1                                        --------->ANAC58  <------NtERF2------->PIF5  <---------AHL20(2)                                     --------->ANAC46 --------->RAP2.6(2) --------->YAB1                                   ----------->GT1        --------->PCF2 <-------PIF5   agattataattatatatgttcttccaatactaaactaaaatgaaaacaaaaatcgaaaaacgaaacaaataagaggccgcactataagcaagtgcaccaa  6266900                                                      <-----------GT1                         <-----------GT1          <---------AHL20(1)                         --------->YAB1           --------->YAB1                    <---------AHL20(2)            <---------ICU4                                -----                   <---------AHL20(1)             <--------ATHB1                           <---------TOE2(3)                   <---------AHL20(2)             <---------AHL20(2)                 --------->ICU4                   --------->AHL20(2)             --------->AHL20(2)                 <---------AHL20(2)               <---------AHL20(2)                --------->ICU4                      --------->AHL20(2) -->RAV1(1)    <---------YAB1               --------->TOE2(3)                ----------->GT1   ------   tagattaatactggtttataattttttttataatccatatagtatttcttaataattttcttcttagaaaatactaatatagtagaaaaaattaagaaaa  6267000                                                       *TSS                   ----------->TBP                --------->ANAC58                 --------------->AGL15            --------->ANAC46                 <---------------AGL15            --------->ANAC58                <-----------------AGL3           ------->GAMYB       <---------DAG2            ----------->GT1<---------ALFIN1                            <------ZmHOX2a(2)       <----------DOF2    <------ZmHOX2a(1)    --------->ZAT14                             <---------ARR11(3)    <-----------GT1--------->AHL20(2)        --------->ANAC46                    <---------MYB52(2) ---->DAG2      ----------------->AGL3     --------->AtMYB61       <---------HSFB2a(2)     --------->ARR11(3) ---->DOF2  <---------ALFIN1 <------ZmHOX2a(1)----------->RAV1(1)  --------->HSFB2a(2) ---------->DOF2   agcatttcactttcccactctataaataggaggagatgtcaaaaaccacaacacaccaaaaacacatttctataaactcagaaacaaacaaaagatcaag  6267100                                                                                            <--------                                                                                            ---------                                                                                            <--------                                                                                            <--------                                                                                            <--------                                                                                            =========                                                                                            <--------                                                                                            <--------                                                                                       <---------ANAC58                                                                                       <---------ANAC58                                                                                  --------->At4g35610                                                                                  <---------At4g35610                                                                               --------->At4g35610                                                               <---------ICU4  <------NtERF2---------                                                               <--------ATHB1 <---------ATERF1(1)                                                               -------->HAHB4 ------>NtERF2 <--------                                                              --------->ICU4  ----------->RAV1(1)                                                              <---------YAB1 --------->ATERF1(2)  ---                                                     <---------ARR14(2)      <---------DEAR3(1) <----                                                     --------->ARR14(2)      <---------ATERF1(2)<----                                                    <-------GAMYB          ------>NtERF2 ----------->HVH21                                                    =================================================                                                   <---------MYB46(3)      --------->LBD16  ---------                                                   <---------DEAR3(2)      <---------ATERF1(1) ------                                                <---------RAP2.3(1)       <---------DEAR3(1)<--------                                               <---------DEAR3(1)<---------YAB1<---------At4g35610---                                               <---------RAP2.3(2)        --------->DEAR3(1)<--------                                          <----------DOF2  ------>ZmHOX2a(1)<------NtERF2<---------MYB52(1)           <---------YAB1          <---------DAG2<------NtERF2<---------ATHB12<---------RAP2.3(1) ---           --------->ICU4          <----------DOF2<---------DEAR3(1)     <---------LBD16<-----------HVH21   aagaaacatggtgatgatcaagaccacaatggtttccctttttgctctagcggcggttctcctaatgattctagccccggcggcagaagccgtgacgtgc  6267200 -ANAC58 >ANAC55(2) -ANAC55(2) -ANAC58--------->At4g35610 -ANAC55(1) =================================MYC_MYB -ANAC46<---------ZAT2 -TGA1a --------->ZAT2 >TGA1a <---------At4g35610 -O2   ------->TEIL ------>ANAC46 -----ANAC58                                                                                <-------- -----ANAC58                                                   <---------ANAC46             <-------- =MYC_MYB                     --------->DOF5.7(2)            <---------At4g35610<---------At4g35610 >bZIP60(1)               ------->GAMYB                      --------->ZAT14    --------->At4g35610 < --->ZAT2              --------->MYB52(1)                    <---------ZAT14  <------ZmHOX2a(1)    <- -bZIP60(1)        ------->MYC3                  --------->AtMYB61     --------->At4g35610--------->ICU4 ------>ANAC58     <-------MYC2                 --------->MYB46(3)  ---------->DOF2--------->At4g35610 -bZIP60(2)        <-------MYC3               --------->ANAC46<-----------------------TaNAC69(2)   -- ------>ANAC58     ------->MYC2 <---------DOF5.7(2)     <----------DOF2<---------At4g35610--------->AtLEC2   tcgccaatgcagctaagcccatgtgcaacggcgataacgtcgtcttctccaccatcggctttgtgctgtgcaaagctgaaggagcagaggccatgcttat  6267300                                     <---------ALFIN1                                    --------->At4g35610    <---------ANAC55(2)             <---------At4g35610    --------->ANAC55(2)         <-----------TGA1 -ANAC58                   <---------DEAR3(2)                   --------->DAG2 -ANAC58   --------->GLK1(1)    <-----------HVH21    ---------->DOF2                            ----- -------GAMYB            <---------MYB52(1)       --------->ANAC58                        ----------- --------MYB46(3)       <-----------HVH21         --------->ANAC58                       ----------->GT1 --------->GT1         --------->ANAC46        ------->GAMYB   ---------->DOF2 <---------ALFIN1------   gtggttacatgagaaaccctagcctccgtcgcttcgtcagcactcccaacgctcgtaaagtctctaaaagttgcaaactccccatcccaaggtgttaaaa  6267400                                                          <---------ANAC46                                                        <---------ANAC58                                                        <---------ANAC58                                                        <---------ANAC46                                                     <---------AtMYB61                 --------------                              ------>ZmHOX2a(1)   <---------DAG2              <---------ICU4       --                       --------->ARR11(3)         <----------DOF2 <---------TOE1(3) <---------------AGL15    ---------->DOF2    <---------ARR11(3)      <---------------AGL15      <---------AHL20(2)       <- ---->DAG2            --------->YAB1           =====================================================MADS_MADS >GT1--------->DAG2  <---------YAB1            ------>ZmHOX2a(1)  <---------TOE2(3) --------------->AGL15 ---->DOF2   <---------At4g35610              <-----------------AGL2<------ZmHOX2a(1)  <-------------   agtcagaaaagtgtttgctgtttatgatcatcctatatatgtttgaatcctacttttggtgtgtgtttaaggatgtttatttatgaccactataagtagt  6267500                                                                                           <---------AHL20(2)                                                                                           --------->AHL20(2)                                                                           <-------GAMYB --------->AHL20(2)                                                                          --------->MYB55(2)                                                                          --------->MYB111(2)                                                               --------->TOE2(3)         <---------AHL20(2) ->AGL15                                         <---------AHL20(2)       <---------MYB46(3) --------->GT1                           ------->TEIL    <-----------GT1 <--------P    <---------AHL20(2) --------ZAT6                   <----------DOF2  --------->AHL20(2)   <---------YAB1   --------->AHL20(2) --AGL15<---------ANAC55(2)     --------------------->WRI1     --------->YAB1<---------MYB46(3) <----   agagttaaataagtaagtggtactcttggtgatgctttgtatgcatcttatttaaatttttgctatcttattctggttgttgttgatatatatatatata  6267600  Previous    Next  AGI:  At3g18280.1    Description:  protease inhibitor/seed storage/lipid transfer protein (LTP) family protein. similar to protease inhibitor/seed storage/lipid transfer protein (LTP) family protein [Arabidopsis thaliana] (TAIR:AT1G48750.1); similar to TED4 [Zinnia elegans] (GB:BAA06462.1); contains InterPro domain Plant lipid transfer protein/seed storage/trypsin-alpha amylase inhibitor (InterPro:IPR003612); contains InterPro domain Bifunctional inhibitor/plant lipid transfer protein/seed storage (InterPro:IPR016140); contains InterPro domain Plant lipid transfer protein and hydrophobic protein, helical; (InterPro:IPR013770) Range:  from: 6267055    to: 6267649    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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