Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100         <---------HSFB2a(2)       --------->HSFB2a(2)   <----------DOF2                     --------->CCA1(2)                                           <- --------->ZAT2               --------->ARR11(3)                                                <---- --------->At4g35610          <---------AHL20(1)                                                ----- <---------At4g35610       --------->AHL20(2)        <-----------GT1                      --------->ZAT6 ---->ZAT14              --------->TOE2(3)    <-------TEIL                              <-----------GT1 ---->ZAT18             <---------ICU4<---------ARR14(2)                             ----------->GT1 -----ZAT14        --------->TOE2(3)  --------->ARR14(2) <---------ICU4              <---------REM1(1) ---TEIL          --------->YAB1  <---------LBD16  --------->YAB1                  --------->At4g35610   cacagctttctaaaacacaaacatcaacattatatattcggatacaaatacatttatactaatttccaaattgtattgttttatcagatgtaacaatact  6251100                                     --------->AHL20(1)                                     --------->AHL20(2)                                  <--------ATHB1                                  -------->HAHB4                                  --------->YAB1                                  <--------HAHB4                                  <---------ICU4                                  --------->ATHB51                                 --------->ICU4                                 <---------ATHB51                                 <---------YAB1                                 --------->AHL20(2)                               --------->YAB1                                               <--------                          <----------DOF2                                                   <--------                        <------ZmHOX2a(2)                                                  <-------TEIL                        <---------RVE1(1)                                                 --------->CCA1(2)                       --------->AGP1<---------AHL20(1)                                   --------->ARR14(1)                       --------->ARR11(3)                         <---------ARR11(3)     <---------ARR14(2)          ----------->RAV1(1) <---------AHL20(2)            --------->TOE1(3)            --------->ARR11(1)          <---------RAP2.6(3)--------->AHL20(2)             --------->YAB1               --------->ARR14(2)          ------>NtERF2<---------AGP1<---------AHL20(2)   ------>MYB46(1)        <---------AHL20(2)         <---------ETT(1)------>ZmHOX2a(2)                ------>MYB83           --------->AHL20(2) ----------GT1         <---------ARR11(3)       ----------->GT1   --------->ARR11(3)   ----------->ARR10 ------DOF2           <---------CCA1(2)  --------->AHL20(2) --------->TOE2(3)  <----------DOF2------- ---->TOE2(3)        ----------->ARR10   <---------AHL20(2)<---------ATHB12    --------->TOE2(3)   ttaaccaattgccgacaaaaacttagatctttttaataattaattaaaaacagaaaaaccaatcttaaaatctcagaaaaactttaatttagatacgcgt  6251200                                             --------->AHL20(2)           <---------AHL20(2)                                       <---------AHL20(1)           <---------YAB1                                       --------->AHL20(2)        --------->AHL20(2)                                       <---------AHL20(2)        <---------AHL20(2)                                 --------->TOE1(3)            ------>MYB46(1)               <----------DOF2   --------->TOE2(3)            ------>MYB83--------->AHL20(2)    <----------DOF2             <---------ANAC55(2)         --------------->AGL15                <---    <---------DAG2     ---------->ID1  --------->AHL20(1)   <---------MYB59--------->AHL20(2) ------- -ANAC46 --------------->AtSPL8 <---------ANAC46           ----------------->AGL3----------->RAV1(2) -ANAC55(2)    <---------DAG2   ----------->GT1       --------------->AtSPL8   <-----------GT1<------ -->ANAC46   ------->TEIL <---------YAB1     <---------AHL20(2) --------->AHL20(2)          ------->TEIL   aaacagctttatatgtactttttttgttgtcattacgttaataaaatataaatctgatggtaccaaatttataaatataaattacctggcgatgaatcat  6251300                                                                                                  ---                               --------->ZAT14                             --------->YAB1         <--                        --------->ZAT14                                    <-----------GT1     ------                        <---------ZAT14    <---------TOE1(3)     <---------YAB1              <-------                       <----------DOF2     <---------TOE2(3)    <---------AHL20(2)<---------AHL20(2)                       <---------DAG2     --------->MYB52(1)    --------->AHL20(2)--------->AHL20(2)                   <---------ZAT18    --------->GLK1(2)       <---------YAB1     <---------AHL20(1)                 --------->At4g35610  <-----------ARR10    <---------AHL20(1)    --------->AHL20(1)                 --------->ZAT2<---------ZAT14             <---------AHL20(2)    <---------AHL20(2) < ------ICU4      <---------At4g35610 <---------GLK1(2)     --------->AHL20(2)    --------->AHL20(2) - -->YAB1         <---------ZAT2--------->At4g35610   <----------DOF2    --------->ANAC46  <---------YAB1 ---ICU4    <-----------GT1    <---------At4g35610  <---------ICU4  <-----------GT1   <<<<<<<<<<GT-3b   catctctgtaaatttctccagctcactttactctgcagagaatctaacgtttcatctttattttatttttatacaaatcacaatttatttttcttattaa  6251400                                                                       ------->GAMYB  --------->DOF5.7(2)         --------->ICU4                                               <---------MYB111(2)    -------->HAHB4                                                    --------->MYB46(3)    --------->YAB1                                       --------->AHL20(2)       --------->LBD16   <---------YAB1                                        ----------->TBP     <---------ARR14(2) <---------ICU4                  <------ZmHOX2a(1)       <---------AHL20(2)  ------>MYB83 --------->YAB1                <---------TOE2(3)       ----------->TBP<---------MYB52(2) ------>YAB1        <---------TOE2(3)                 <---------AHL20(1)     ------>MYB46(1) -------ICU4--------->ICU4--------->YAB1              --------->AHL20(1) -------->P   <---------MYB52(1) --->YAB1<---------YAB1  --------->AHL20(2)           <---------ARR11(3)--------->MYB52(1)        <-- --YAB1--------->YAB1<---------YAB1              <---------YAB1       <---------MYB55(2)        ----- ---------YAB1 <-----------RAV1(1)              <-----------GT1       <---------MYB46(2)<---------DOF5.7(2) -------->ICU4 <---------YAB1---------->DOF2   --------->YAB1         <---------MYB111(1)*TSS -------   taataataatagtgattatgttgacgattaataaaggattagtttcgaattatcaatatataaatccgtccaactaacctatcccgtcgttatcgaacca  6251500                                                         ------>NtERF2                                                        --------->RAP2.3(3)                                                        --------->RAP2.3(2)                                                        --------->DEAR3(1)                                                       --------->ATERF1(1)                                                       --------->RAP2.3(1)                                                       --------->DEAR4(2)                                                      ------>NtERF2                                                      <---------ATERF1(1)                                                      --------->ABI4(1)                                                     --------->DREB2C(2)                                                     --------->RRTF1(2)                                                     --------->RAP2.3(3)                                                     --------->RRTF1(3)                                                     --------->RAP2.3(2)                                                     --------->DEAR3(1)                                                     <---------DEAR3(1)                                                     --------->ATERF1(2)                                                     --------->RAP2.6(2)                                                    --------->ORA47(2)                                                    --------->RAP2.3(1)                                                    --------->ATERF1(1)                                                    --------->ERF1                                                    <------NtERF2                                                    --------->RAP2.6(1)                                                    --------->DEAR4(2)                                                    --------->RRTF1(1)                                                   <---------At4g35610                                                   ------>NtERF2                                                   --------->ABI4(1)                                                   <---------DREB2C(1)                                                   --------->At4g35610                                                   <---------DEAR4(2)                                                   <---------ATERF1(1)                                                   <---------RAP2.3(1)                                                  <---------ATERF1(2)                                                  --------->DEAR3(1)                                                  <---------DEAR3(1)                                                  --------->ANAC46                                                  --------->RRTF1(2)                                                  --------->RRTF1(3)                                                  --------->RAP2.3(3)                                                  --------->ATERF1(2)                                                  --------->RAP2.3(2)         <------NtERF2                                                  --------->RAP2.6(2)        ------>NtERF2                                                  <---------ALFIN1           ----------->RAV1(1)                                                 --------->RAP2.3(1)        --------->RAP2.3(3)                                                 <------NtERF2              --------->DEAR3(1)                                                 --------->ERF1             --------->RAP2.3(2)                                                 --------->ORA47(2)        --------->ERF1                                                 --------->ATERF1(1)       --------->RRTF1(1)                                                 --------->RRTF1(1)        --------->ATERF1(1)                                                 --------->DEAR4(2)       <---------ATERF1(1)         <---------ALFIN1            --------->ARR14(2)--------->ORA47(2) --------->LBD16       <---------ALFIN1       -------->P         --------->RAP2.6(1)      ------>NtERF2    --------->ANAC58        ------->GAMYB------>ZmHOX2a(1)<---------CCA1(2)--------->RAP2.3(1)    ---    --------->PCF2         <---------MYB52(2)   ------>NtERF2             <---------RAP2.3(1)    <---    --------->ANAC58       <---------MYB46(2)   <---------ATERF1(1)      <---------RAP2.3(2)    <----  <---------GLK1(1)        --------->MYB46(3)   --------->LBD16         <---------LBD16     <-------- -------ATHB12             <---------MYB111(1) --------->ANAC46    <---------MYB52(1)       --------- ---->MYB52(1)   <----------DOF2     <---------ARR14(2)<------NtERF2<----------DOF2      <---------ANAC58 -->MYB46(3)     <---------DAG2 ------->GAMYB <---------LBD16     --------->LBD16        <---------ANAC58   atggagaccccactccctcctttatcgcaactaaccccaaatcctactcccgccgccgccgtctcttccgctattccggcgccagttaagagcgtagccg  6251600                             <-------GAMYB                           <------NtERF2                         --------->ANAC46                        <-------MYC2                        ------->MYC2                                             <----------CDC5                        ------->MYC3                                          --------->RAP2.3(1)                        <-------MYC3                                          <------NtERF2                        <-------PIF5                                         ------>NtERF2                        ------->PIF5                                         --------->LBD16                  ------>ZmHOX2a(2)                                         --------->LBD16                 --------->GLK1(1)                                    <---------MYB46(3)                 <---------GLK1(1)                                  <---------At4g35610         <------ZmHOX2a(2)------>NtERF2                            <---------RAP2.3(1)     --------->MYB46(3)--------->ANAC58                           <---------RRTF1(2)    -------->P  ------->TEIL--------->DEAR3(1)                    <---------ANAC46  --------->MYB46(3)   --------->ANAC58                           <---------RAP2.3(2) --------->At4g35610   --------->ANAC46                           <---------ANAC58      <-------TEIL <---------At4g35610 <---------ALFIN1                             <---------RAP2.6(2)<---------HSFC1(2) ------>SPL7    --------->ARR11(3)          --------->LBD16       <---------ANAC58   --------->HSFC1(2) ------MYB52(1) <---------AGP1<---------MYB52(1)       ------>ZmHOX2a(1)   <---------HSFB2a(2)     <- -----RAP2.6(3) <---------ARR11(3)        <---------LBD16        <---------LBD16------>NtERF2      <- -ARR14(2)      <---------ARR14(2)       --------->MYB52(1) <---------ALFIN1--------->ANAC46       -- >ARR14(2)      --------->ARR14(2)   <---------ZAT6  ----------->RAV1(2)   <---------LBD16         --   ttcagcaaccgatcgatggatctccacgcgccgttgctactgataccggaggtattcctgagccacttgcggctgttcccggcgctaagcttcgtcttat  6251700                                                           <------NtERF2                                                           --------->ATERF1(1)                                                          <---------DEAR4(2)                                                          <---------RAP2.3(1)                                                          <---------ATERF1(1)                                                          ------>NtERF2                                                          <---------ERF1                                                         --------->ATERF1(2)                                                         <---------DEAR3(1)                                                         <---------ATERF1(2)                                                         --------->DEAR3(1)                                                         <---------RAP2.3(2)                <--------                                                         <---------RAP2.3(3)              --------->ALFIN1                                                        --------->ATERF1(1)              ------->PIF5                                                       <---------ATERF1(1)              <---------ANAC58                                                       --------->LBD16                  <---------ANAC58                                                       ------>NtERF2                    --------->O2                                                       <---------RAP2.3(1)              <---------O2                                                <---------SPL7                       ------>ZmHOX2a(2)                                               <---------ANAC58                ===================MYC_MYB                                              --------------->AtSPL3           <-------GAMYB<--------                                              <---------TOE2(3)                ----------------------                                            --------->WRKY12                  <---------MYB46(3)                                            ----------->HVH21                 --------->MYB55(2)           <------NtERF2         --------->ANAC58     <---------DEAR3(1)      --------->MYB111(2)         <---------RAP2.6(2)   --------->ANAC46<---------ANAC58              <--------P --------->TGA1a      <---------AtMYB61        <---------ALFIN1--------->ANAC55(2)           =====================MYC_MYB   <---------ARR14(2)        <---------ALFIN1<---------DOF5.7(2)            <-------GAMYB<-------PIF5 --------ZAT18              <---------ZAT18--------->DOF5.7(2)              ======================MYC_MYB --------ZAT14    <---------ICU4 --------->ANAC46    <---------LBD16       <---------MYB46(3)<------- ------->ZAT18 --------->bZIP60(2)      <---------ATHB12<---------ABI4(1) <---------YAB1<---------TGA1a ------->ZAT14 --------->REM1(1) --------->ANAC58 --------->SPL7          <---------TOE2(3)<-------TEIL   gtgcagttttggtggccacatcatgcctcgtccacacgacaaatcgttgacgtactccggcggcgagactcgtattgtggttgttgatcgacgtgcgtca  6251800                                                                                             <-------                                                                                            ---------                                                                                            ---------                                                                                            ---------                                                                                            ---------                                                                                            ---------                                                                                 ------>ZmHOX2a(2)                                                                                <------ZmHOX2a(2)                                                                               --------->ARR11(3)                                                                               <---------ARR11(3)                                                ------>ZmHOX2a(1)              <---------ARR14(3)                            <---------YAB1      <----------DOF2                --------->ARR14(2)                 <---------CCA1(2)          <---------MYB52(1)               ----------->ARR10  ----------------------->TaNAC69(2)       <---------DEAR3(2)    --------->At4g35610        --------- -ANAC58    <------ZmHOX2a(2)             <---------MYB46(3)     --------->ZAT2<---------AGP1<------- -ANAC58   <---------ARR14(2)          ------->GAMYB             <---------ZAT2<---------ARR14(2) ->TaNAC69(2)------>ZmHOX2a(2)        --------->MYB46(3)         <---------At4g35610    <-----------GT1 ----HVH21 --------->ARR14(2)       --------->MYB52(1)       --------->MYB52(1)--------->ARR14(3) ---   ctgtcttcgctccgatctcgtctctctagtatgcttctcaacggccggtcctttactctcaagtaccagctccctagcgaagatctcgattcactcgtca  6251900                                                                           <---------ANAC55(2)                                                                   ------>NtERF2                                                                   <---------ATERF1(1)                                                                 <------NtERF2                                                                 --------->RAP2.3(1)                                                                 --------->ATERF1(1)                 =========================HOX2a_HOX2a           ------>NtERF2             <---------MYB46(3)                 ------>ZmHOX2a(2)                         --------->At4g35610           <--------P                <------ZmHOX2a(2)                          <---------At4g35610          <-------GAMYB                --------->CCA1(2)                          <------NtERF2   --------->ANAC46                ==========================HOX2a_HOX2a    <---------WRKY12  --------->ANAC55(2) <---------ICU4<---------ARR11(3)                      <-----------HVH21   --------->ANAC58 --------->ZAT6--------->ARR11(3)                 <------NtERF2 <---------ATERF1(1)     <---------MYB52(1) ----HVH21     --------->AGP1                    <---------ATERF1(1)--------->ATERF1(1)--------->LBD16 >ANAC58       --------->GLK1(2)               --------->LBD16  <---------RAP2.3(1)  <---------LBD16 >ANAC46       <---------ARR14(3)            <---------LBD16--------->DEAR3(1)  --------->MYB46(3) >ANAC58       <---------AGP1               ------>ZmHOX2a(2)  --------->DEAR3(1)    <------NtERF2 >O2 --------->MYB52(1)    <---------YAB1  <------ZmHOX2a(2)----------->HVH21 --------->MYB52(1)<---- >TGA1a        --------->ARR14(3)  <------ZmHOX2a(1)   <-----------TGA1    --------->ANAC58     <---- >bZIP60(2)    <---------ARR14(2)  ================HOX2a_HOX2a <---------DEAR3(1)  <---------ARR14(2) ----TGA1    ----------->ARR10 ------>ZmHOX2a(2)<---------DEAR3(1)--------->DEAR3(1)------>NtERF2 ------>AtMYB61--------->ARR14(2)  ===============HOX2a_HOX2a --------->ATERF1(1)  --------->ARR14(2)   ccatcactaccgatgaagatctggagaacatgatcgaggaatacgatcgcgcggcttcgtcagcgacggcgactgctacgcaacggctccggttgttcct  6252000  Previous    Next  AGI:  At3g18230.1    Description:  octicosapeptide/Phox/Bem1p (PB1) domain-containing protein. similar to octicosapeptide/Phox/Bem1p (PB1) domain-containing protein [Arabidopsis thaliana] (TAIR:AT2G01190.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO68114.1); contains InterPro domain Octicosapeptide/Phox/Bem1p (InterPro:IPR000270) Range:  from: 6251489    to: 6254227    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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