Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                                    ---                                                                                                  <--                                                                                  <---------AHL20(2)                                                                                  --------->AHL20(1)                                                                                  --------->AHL20(2)                                                                                 <---------AHL20(2)--                                                                                 --------->AHL20(2)<-                                                                        <-------GAMYB             <--                                                                        <---------ANAC58         <---                                    <---------RVE1(1)                   <---------ANAC58        -----                              --------->MYB52(1)  <----------DOF2      <---------MYB46(3)     <------                 <----------DOF2    <---------CCA1(1)                 <---------YAB1    <---------ANAC46 -------DOF2     <---------DAG2     --------->GLK1(1)           --------------->AGL15   <---------ANAC58 ----At4g35610  <---------ANAC58   <---------ARR14(2)          <-----------------AGL3   <---------ANAC58 --->At4g35610  <---------ANAC58   --------->ARR14(2) <----------DOF2 <---------TOE2(3) <---------AtLEC2   tttaatctgttttgaatagcttttcccccatttaacggatatttttgtcatgctttctttccttctcttattttggttgcaaattaaattgcatgtttta  6229900 <---------GLK1(1) ------>ICU4 -------ATHB12                                                                                   ---- ------->ATHB12                                                                             ========= --------ICU4                                                                               ------>ZmHOX2a(1) -------YAB1          <---------At4g35610                                                  --------->TOE1(3) ------TOE2(3)        --------->At4g35610                    ----------->GT1               --------->TOE2(3) ---->YAB1--------->ICU4                                   ---------->DOF2           ------>ZmHOX2a(1) ---AHL20(2) <---------YAB1         --------->ZAT6        --------->AHL20(2)         ================   atgatttctgtaattttgatatggagctaaatgactcatcactaactcaatatgaagcaaataaagaaaaaactcccaagacttctccttcttccttaaa  6230000                      <----------DOF2                   <---------ALFIN1             <------ZmHOX2a(2)            --------->ARR11(3)   --------------->AGL15   <---------------AGL15  ------------>CBF--------->MYB46(3)                                          ------------>CBF     --  ----------------->AGL3                                                <-------TEIL               XX ----->ZAT6 <---------ARR11(3)                    <----------DOF2<----------DOF2            --------- ===================HOX2a_HOX2a      <---------STY1(2)       <---------ZAT18 --------->TOE2(3)   ---- ===================HOX2a_HOX2a      --------->STY1(2)   --------------->AtSPL8   <---------ATHB12 <-   ctctaccaatataagatcgaaccactttgaacatgctctagctagttctcttctttaaaccagtaccctttatattcattctcaataactaaaacgttat  6230100                                                                              <---------WRKY18(1)                                                                           <---------ANAC58                                                                           <---------ANAC58                                                                         ------>MYB46(1) --------->ZAT6 --------->GT1                      --------->TOE2(3)                    ------>MYB83  <---------ARR11(3) XXXXXXXXXXXXXXXXXXX>MIR2936     <---------GLK1(2)                     <---------MYB111(2) >TOE2(3)               --------->TOE2(3)        --------->ANAC55(2)  --------->ZAT2   --------->ARR11(3) ------->GT1         <---------ARR11(3)     --------->ANAC46        <---------ALFIN1  <---------CCA1(2) --------ZAT6        --------->ARR11(3)   <-----------GT1------>ZmHOX2a(1)--------->STY1(2)    ------   agtgaaaaaaaaaacacagataatatcgtcaaacaaattcttaaatacctcacataatcctctcgctctcccacctagcttgaccttcatatctctacat  6230200                                                                                                    -                                                                                               ------                                                                                       --------->KAN4(2)                                                                                      --------->GLK1(1)                                                                                      <---------GLK1(1)                                                                                      <---------KAN4(1)                                                                                      --------->KAN4(1)                                                                                      <----------TaMYB80                                                                                     --------->ARR11(3)                                                                                     --------->ARR14(2)                                                                                     <---------ARR11(3)                                                                                     <---------ARR14(2)           <---------YAB1             ---------->DOF2                               <------ZmHOX2a(1)     <---------ZAT18     <---------ANAC58                                    ---------->DOF2   <-----     --------->ZAT14     <---------ANAC58                                ----------->HVH21   <-------     <---------ZAT14   --------->GLK1(2)   ---------->DOF2             --------->CCA1(2)--------->GLK1(2) --->TOE2(3)  <---------YAB1       >>>>>>>>>TBF1  <---------ANAC46     --------->At4g35610 <---------   tagccagtaaactctgattatagagtttcttgctgaagaagaaagaaaagttttgtgtaacttaagagtcaagagatgacaaagaaggatattctttacg  6230300                <---------ZAT6              <---------TOE2(2)     <---------ANAC58                                          <---------ANAC58     <---------ANAC58                                     --------->ATHB12                       ---- -------------->AtSPL3                                 <----------DOF2                           <--- --->ANAC46   <---------TOE1(2)                  --------->ALFIN1                         --------->ZAT14 ----YAB1<---------ANAC58                      <---------ANAC46<---------ANAC58           <---------ZAT14 ----GT1 <---------ANAC46                 <----------DOF2<---------YAB1              <---------DAG2 -DOF2   <---------ANAC58         --------->At4g35610<---------At4g35610         ------>ZmHOX2a(1)   atacagtacttgctcgtagttttagcaaaactgatcagaagagactttgctgtggagctttcattgcctctcttctcttggtcctcactctttgcactgt  6230400                                                                                            ------->TEIL                                                                                           <---------CCA1(2)                                                                                       <---------ANAC58                                                                                       <---------ANAC46                                                                                       <---------ANAC58        <-----------ARR10     <--------P                           --------->ANAC58   <---------TOE2(3)       <---------CCA1(2)     <---------MYB52(1)                  --------->MYB52(1)  <-----------GT1     --------->TOE1(3)    <---------ATHB12              --------->DAG2         <--------HAHB4     --------->TOE2(3)   ------>MYB46(1)               ---------->DOF2         --------->YAB1     <---------DAG2      ------>MYB83                <---------RAP2.6(3)       <---------ICU4  <-----------GT1        --------->MYB52(1)         --------->LBD16--------->ANAC58<---------AHL20(2) ------->GT1      <----------DOF2            ------->MYC3--------->ANAC58     <---------ATHB12 ------ANAC46     <---------DAG2             <-------MYC3--------->ANAC58   --------->WOX13(1)   <---   cgttaaaccttatctcagccctttaccaatcggtaagtctcttaccacgttttgccgaaaagccagataacgcaaaaacaatcattttaacgtgtatctc  6230500                                                                                  --------->ZAT14                                                                              --------->ZAT6                                                                             ------>MYB83                                                                             ------>MYB46(1)               <---------ZAT18                                               -------->P               --------->ZAT14                         <---------ANAC46     ----------->RAV1(1)               <---------ZAT14                     <---------At4g35610     --------->AtMYB61          <---------ZAT14                       <------ZmHOX2a(1)        -------->P     <----------DOF2                          <---------TOE2(3)      <-----------GT1 <----------DOF2     <---------At5g28300      <---------TOE1(3)     --------->AHL20(2)             -- -------DOF2<---------ANAC46   --------->At4g35610 --------->At4g35610 --------->MYB46(3)  ----------   tttctttctttcttcagtggagttacagttatcagttggcactggtctaaggatgctgagtataacagaattaactaccaacactacaatctccaaagaa  6230600                             <-----------GT1                           --------->HSFB2a(1)    <---------TOE1(3)                           <---------HSFB2a(1)    <---------TOE2(3)                  <---------MYB52(1)                         <---------GLK1(2)        <---------YAB1             <---------YAB1    <----- --------->GT1  <---------AHL20(1)         <---------ANAC58            <---------ZAT14      <-------- >DOF2          <---------ARR11(3)         <---------ANAC58            --------->ZAT14   ---------->ID1   gaagttatttcaggtcaatatacttcagaattttctctacaattgtcttgttatggtttttagtcattttctgtatagtatgatacagtttgttcttttg  6230700                                                                                                 ----                                                                                                 ----                                                                                                 ====                                                                                                 <---                                                                                                 ----                                                                                                 <---                                                                                                 <---                                                                                                 ----                                                                                                 <---                                                                                                 ----                                                                                                <----                                                                                               ------                                                                                              -------                                                                                              <------                                                                                              -------                             --------->AHL20(1)                                              --------                             <---------AHL20(2)                                              <------NtERF2                        --------->ZAT18                                                      --------                        --------->ZAT14     <---------ARR14(2)                              <--------             ------->TEIL    --------->AHL20(2)                        ==============================             --------->ARR14(2)             ------>MYB46(1)            ---------->DOF2      <--------      ------>ZmHOX2a(1) <---------ZAT18     --------->ARR14(2)      --------->ANAC58        <--------      ----------->HVH21 <---------ZAT14     ------>MYB83            --------->ANAC58       <---------DEAR3(1) ----YAB1    <---------ARR14(2)   ----------->GT1     --------->At5g28300                 --------->At4g35610 --DOF2     <---------GLK1(2)<---------AHL20(1) <-----------HVH21 <------ZmHOX2a(1)       <---------At4g35610   attttgtcctgactgaatcttcagagtgcaataaaatggagaaacctatctgtcactgtaacacactaggaagcaaagagttttgcgatgtaagcggcga  6230800  Previous    Next  AGI:  At3g18180.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G18170.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO68130.1); contains InterPro domain Protein of unknown function DUF563 (InterPro:IPR007657) Range:  from: 6230276    to: 6231884    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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