Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                    <---------MYB52(1)                   --------->ALFIN1 --------->MYB52(2)             --------->ANAC58   <---------ANAC46             --------->ANAC58   <---------ANAC58             --------->ANAC46   <---------ANAC58         ------>ZmHOX2a(2)   <---------MYB52(1)        <------ZmHOX2a(2)   <-------GAMYB       --------->ARR11(3)  <---------ANAC58       <---------ARR11(3)  <---------ANAC58      <---------GLK1(1)    <---------ANAC46             --------->DEAR3(1)      --------->GLK1(1)    <---------bZIP60(2)       --------->ANAC58        --------->ANAC58 --------->At4g35610  <---------ANAC58               --------->ANAC58        --------->ANAC58 <---------At4g35610  <---------ANAC58            --------->ARR14(2) ----------->RAV1(1) ------REM1(1)     <-----------RAV1(1)     <------ZmHOX2a(1)  <-----------HVH21        ---------->DOF2   tgtagcagagatctcactcaagtgttgtgccgttgcgttagtagaggagatggaaacgcagaccggtctggccacagggatgcaattggcaaagctatta  6222800                              --------->At4g35610                              <---------At4g35610                               ----------->GT1                              --------->ZAT2         <---------ANAC58      <---------ANAC58                              <---------ZAT2  --------->MYB52(1)           <---------ANAC46                              ----------->RAV1(2)  --------->ARR14(2)      ----------->RAV1(2)                            <-----------RAV1(2)   <---------MYB52(1)       <---------AtLEC2                         <---------GLK1(1)   <---------ARR14(2)            <---------ANAC58                         --------->GLK1(1)   --------->ARR14(2)        --------->CCA1(2)                     <------NtERF2         ----------->ARR10       --------->LBD16   <-----------GT1                   <---------ANAC46    <------NtERF2<---------MYB46(3)--------->ARR14(2)            <                  <---------LBD16     --------->LBD16<---------ANAC58 <---------ARR14(2)       <-----     ----------->GT1--------->LBD16 <---------LBD16<---------ARR14(2) <---------GLK1(2)   <----------DOF2   ccacagattgagaaaaccatgccggagatttcagctgagccggagaagaaccggttcttgcaactcatccgagatttgcctgaagttaaactctttttta  6222900                                    --------->ANAC46                             --------->ATHB51                               <---------TOE1(2)            --------->ARR14(2)    <-----------GT1                        --------->YAB1       --------->ANAC46      <--------HAHB4                             <---------YAB1       --------->ANAC58      <---------ICU4                ------>ZmHOX2a(1)<---------TOE2(2)       --------->ANAC58     --------->ICU4   <---------------AGL15    <-----------GT1 ----------DOF2             <---------YAB1  ----------------->AGL3<---------DAG2                  --- ------GT1  <---------ARR14(2) <---------YAB1--------------->AGL15<----------DOF2      <-----------GT1   ctcttttatacgcaaatatgcctcagtagcattattaaaccccattgccaaaaattgtttcctgatcactttttatcatatgtttcgatttacttcaaaa  6223000                      <---------ICU4                      --------->YAB1                      --------->ATHB51                      <--------ATHB1                     --------->ICU4                                                                 -                   --------->YAB1                                                                   <                <---------HSFB2a(2)                                    --------->At4g35610         <-           --------->ARR11(3)                                          <---------At4g35610       ----           <---------ARR11(3)    <---------ARR11(3)        ----------->GT1              <---------ANAC46        ------>MYB46(1)          --------->ARR11(3) <---------------AGL15          <------ZmHOX2a(1)<        ------>MYB83 <---------YAB1                 --------------->AGL15----------->RAV1(1)     <--- -------->GT1   --------->HSFB2a(2)          <---------ATHB12  <---------YAB1  ---------->DOF2 <-----   tagtaaaaccaaacatctctagaataattgttcaatatctatatcaaatcatttactaatatagtaatattgcagcaacaaaaaaggacaccgtgtatta  6223100                                                   <---------DEAR3(2)                                                   ----------->GT1                                                   <------MYB46(1)                                                  --------->MYB46(2)                                                  --------->MYB55(2)                                                  <---------MYB46(3)                                                  <---------DEAR4(1)                                                  <---------DEAR3(1)   <----------DOF2                               <--------P -------->ARR11(3)                              <-----------HVH21 ---------ARR11(3)                            --------->LBD16 --------CCA1(2)       ---------->DOF2      <---------LBD16                         <---------ANAC58 ----->ANAC55(2)     --------->HSFB2a(2)--------->AHL20(2)               <---------AHL20(2) ---------ARR11(1)   <---------HSFB2a(2)---------->DOF2                  <---------YAB1       *TSS ------ANAC55(2) <---------ZAT18       <---------ATHB12     <-----------GT1   <---------AHL20(2)<---- ------GT1       --------->ZAT18   ------------>CBF<------MYB83      <----------DOF2<---------ANAC58   catatctttcagtttttagggccctagaagcccaaggcccaataaaaccgggtcggtgatattaacttcttcttttttattaacttgggtctctccatct  6223200                                                                                                  ---                                                                                               <-----                                                                                               ------                                                                                              <------                                                                                              <------                                                                                              -------                                                                                            <------NtERF2                                                                                            <--------                                                                                            ---------                                                                                           ------>NtERF2                                                                                          --------->O2                                                                                          --------->DEAR3(1)                                                                                          <---------DEAR3(1)                                                                                          <---------O2                                                                                         <------NtERF2                                                                                        ------>NtERF2                                                                                        <---------ATERF1(1)                                                                                       ----------->HVH21                                                                                       <---------DEAR3(1)                                                                                       --------->DEAR3(1)                                                                                      <------NtERF2<-                                                                                      --------->ATERF1(1)                                                         <---------MYB52(2)           --------->RAP2.3(1)                            <---------GLK1(1)           <------NtERF2         <-----------RAV1(1)<---                      <----------DOF2                  ------>NtERF2     <---------ANAC58--------->RAP2.3(1)            --------->ARR14(2)                        <----------ID1     <---------ANAC58--------->ATERF1(1) ------DOF2 <---------ARR14(2)             --------->CCA1(2)     --------->YAB1      <---------ATERF1(1)   ttctcagttctcactatctggacactttcgatttctgaagttgagagacgactatggcgacgaacaatggtgatgtcttgatgttggaggcgacgccgga  6223300      ------>NtERF2 <------NtERF2 ------>ATERF1(1) -NtERF2 --->ATERF1(1) ---SPL7              ------>NtERF2 ---ATERF1(1)         <------NtERF2                             ------>NtERF2 -->LBD16           <---------RAP2.6(2)            ------>ZmHOX2a(1)                            <---- -LBD16             <---------DEAR3(1)            --------->TOE2(3)              --------->ATHB12 >ATERF1(1)        --------->ZAT18                --------------->AGL15   --------->ANAC58      ----- --------DEAR3(1)  <---------ZAT14                <---------------AGL15   --------->ANAC58  <-------- ------ATERF1(1)   <---------LBD16               ----------------->AGL3  --------->WOX13(1)<------NtERF2   ggctgcgaggccctgggctagtgcggcgaatgcagaagttatcgatgcgcttccttatatagacgacgactatggcaatccattgattaagtcggaggta  6223400     <------MYB83     <---------ANAC46     <------MYB46(1)    <---------MYB46(3)    --------->MYB111(1)     --------->At4g35610    --------->MYB52(2)      --------->GLK1(1)    --------->MYB46(2)    <------NtERF2         <----------DOF2    <---------AtMYB61<---------ANAC58     ----------->RAV1(2)    --------->MYB55(2)<-----------HVH21   --------->ZAT2    --------->MYB111(2) <---------DEAR3(1)<---------ZAT2   <---------ANAC58   <---------MYB55(1)<---------ANAC58     <---------At4g35610  <---------MYB52(1) <---------ANAC46     --------->At4g35610    ------>NtERF2                     <- -----ETT(2)        <-------TEIL        <-----------RAV1(2)<---------ANAC58             <---------TOE2(3) ---->ETT(2)     --------->CCA1(2)   --------->ANAC58    <------ZmHOX2a(1)--------->LBD16----------->GT1 -TOE2(2)   <------ZmHOX2a(1)        --------->ANAC58---------->DOF2------>ZmHOX2a(1)   <---------TOE1(3)   gaccgtttggtggaggaagagatgcgtcggagctctaagaagccagctgactttctaaaggacttgcctcctcttccgaagttcgattttaaggtgaatt  6223500              <-----------GT1          <----------DOF2          ------>ZmHOX2a(1)            <---------STY1(2)                 ---------->DOF2 --------->GLK1(1)      --------->ARR14(2)               --------->STY1(2)            ----------->GT1 <------MYB83<----      <---------ARR14(2)     --------->MYB52(2)                    <---------TOE1(3)<------MYB46(1)  --------->At5g28300    <---------MYB46(3)                        <---------TOE2(3)----------->GT1 --------At5g28300     --------------------->WRI1        <-----------RAV1(1)    <---------ARR14(2)<--   tcactgtgaatccttttatcgatttgtttgttcgtttctctagctagggtttggaaattttgttggattagggtttaaagggaatttggtgaattccaat  6223600                                                                          <---------ANAC58                                                                          <---------ANAC58                                                                 --------->ATHB12                                                                 --------->YAB1       <---------LBD16                      <---------ZAT6      <---------YAB1 -----ATHB12                         <------ZmHOX2a(1)     --------->MYB52(2)  <--------------------- --------DOF2  <-----------GT1<----------DOF2              <---------MYB46(3) ---------->ID1       --   cttttggtttctgggttttacttcatcttggactttataggagtgagtgttgattttgggtttgttatgatagggttcttgttctcttcttctattcgtt  6223700  Previous    Next  AGI:  At3g18160.1    Description:  PEX3-1 (PEROXIN 3-1). similar to PEX3/PEX3-2 (PEROXIN 3-2) [Arabidopsis thaliana] (TAIR:AT1G48635.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO68158.1); contains InterPro domain Peroxin-3; (InterPro:IPR006966) Range:  from: 6220632    to: 6223079    Orientation: Forward Links:  TAIR  MIPS    AGI:  At3g18165.1    Description:  MOS4 (MODIFIER OF SNC1,4). similar to unnamed protein product [Vitis vinifera] (GB:CAO68149.1); contains InterPro domain Breast carcinoma amplified sequence 2 (InterPro:IPR008409) Range:  from: 6223194    to: 6225378    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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