Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                              <---------ARR14(2)                                                            --------->ARR14(2)                                                           <---------CCA1(2)                                              ----------->ARR10 ------>ZmHOX2a(1)     --------->ANAC58            ---------->DOF2            ============================RAV                --------->ANAC46  <------NtERF2                 --------->ARR11(3)     ----------->RAV1(1)        ------>MYB46(1) --------->LBD16    <---------ZAT18    --------->ANAC55(2) <---------GLK1(1)    <---------MYB59 --------LBD16      <---------ZAT14    ----------->RAV1(2) --------->GLK1(1)    --------->AtMYB61 ------->At4g35610  --------->ZAT14<----------DOF2------>ZmHOX2a(2)         <---------ETT(1)--------- ------DEAR3(1)   --------->At4g35610<-----------GT1------>ZmHOX2a(1)<----------DOF2  --------->ANAC58 --YAB1  ---------->DOF2        <---------ARR11(3)=====================HOX2a_HOX2a------>MYB83   cggcggaaaatcaaagaagcagtagactcaataagctctttacctgatgtgatcctccaacatatcctctcctttattccgaccaaactcgccatcacaa  6218100                                                             <---------YAB1                                                           --------->ATHB12                                                           -------->HAHB4                                                           <---------ICU4                                                           --------->YAB1                                                          <---------ATHB12                                                          --------->ICU4                                                          <---------YAB1                --------->ANAC46                                       <---------ALFIN1  <---------TOE2(3)              --------->ANAC58                                       <-----------GT1 <---------AHL20(2)               --------->ANAC58                                <---------ANAC46       --------->AHL20(2)    ----------------->AGL3                                <---------ANAC58      --------->AHL20(2)  --------->ATERF1(1) ------- >YAB1                          <---------ANAC58<----------DOF2          <---------ATERF1(1)  -------   cttccctcttgtcaaaacgatggagacatgtatggtgtgatacaccttctctttcatttaatgattacagactggaggctccatttatagacgaaaccct  6218200                                                                                                   --                                                                                                   <-                                                                                                  ---                                                                                                  <--                                                                                                 ----                                                                                                 ----                                                                                                 <---          --------->At4g35610                                                                    ----          <---------At4g35610                                                                   <----    <----------DOF2                                                                          <------- --------->ANAC58              <-----------GT1                                              --------- --------->ANAC58        <---------ANAC58                                              --------->ANAC58 -->TOE1(3)              <---------ANAC46   <---------ZAT2             ---------->DOF2 --------->ANAC58 -->TOE2(3)              <---------ANAC58   --------->ZAT2      <---------ALFIN1<------ZmHOX2a(2)----   aactcgctatacagcttccaagatgatgcgttttcacctccataccagcttgatcaacaatgttccccacttagaaagttggatcaagttcgccatgtcc  6218300        <------ZmHOX2a(2)  <---------HSFB2a(2)    --------->ALFIN1       --------->HSFB2a(2)  <---------bZIP60(2)     <---------LBD16  <---------ANAC46      ------>ZmHOX2a(2)  <---------ANAC58     --------->GLK1(1)  <---------ANAC58     <---------GLK1(1)  <---------O2        <---------AGP1 --------->HVH21      --------->ARR11(3) --------MYB52(1)     <---------ARR14(2) ------>LBD16         <---------ARR11(3)                                                           <- ---------HVH21       --------->ARR14(2)                                                           -- ----->ANAC58        <---------CCA1(2)                                                        ------- ----->ANAC58      --------->LBD16                                                           <------- ------ANAC55(2)   <---------TOE1(2)                                                        --------- ----->ANAC55(2)  <---------LBD16                                                       --------->ANAC58 -----LBD16----------->RAV1(2)                                         --------->ANAC46 --------->ANAC58 ----HVH21 <---------At4g35610                             ------>ZmHOX2a(1)     <---------At4g35610< >bZIP60(2)--------->At4g35610              <---------ATHB12         <---------ALFIN1   --------->ANAC46 ----->ANAC46 <-----------HVH21         ----------------->AGL1--------->GLK1(1)  <---------CCA1(2)<--   cgtaacgtggatcatctgtccctggatctctggaatcaagttgccaataagtttaagtttcctgatttcttccacatcaattcatctctcaagcaactca  6218400                                    --------->At4g35610   <---------ZAT6                 ------->MYC3 <---------ANAC46                 <-------MYC3 --------ZAT14             <---------WOX13(1) ------->ZAT14           --------->ATHB12 >GAMYB                  <---------ICU4 --MYB52(2)     <---------YAB1----------------->AGL1 >At4g35610<----------DOF2<------------CBF                               --------->At4g35610 ---------MYB52(1)      <---------YAB1                     <---------ANAC58           *TSS          < ---------RAV1(1)       --------->ICU4                     <---------ANAC58   ------->TEIL          <   ctgttgtgttagacttttctgatacgatgattgccatatgctgaagaagttgtacttgagtacttgtcttctctctgatgaatccatggctaacattcta  6218500                                                <---------TOE2(3)                                          --------->ZAT14                                          <---------ZAT18                                          <---------ZAT14                                         --------->ALFIN1                                     --------->ZAT14                      <---------ZAT18                                <---------ZAT14--------->MYB52(1)      <---------At5g28300 <---------ANAC58              <---------ARR11(3)                    <---------ATHB12 <-------GAMYB           --------->ZAT6<---------ANAC46         <---------At4g35610 <---------ANAC58  --------->At4g35610<---------DEAR3(1)    ------>ZmHOX2a(2)----------->RAV1(2) ------MYB83 <---------HSFB2a(2)<------ZmHOX2a(2)  <XXXXXXXXXXXXXXXXXXXXMIR832-5P     --------->TOE2(3) ------MYB46(1)   <---------ARR11(3) <---------ZAT14      <---------ARR11(3)------>NtERF2          --   tttggttgtccaattctcgagagcttaacactagatcactgcggtggactaagggttcttgatctcagcaaatcactgcgcctgagaacattagaaataa  6218600                         ------->GAMYB                       --------->RAP2.6(3)                      --------->MYB52(1)                      <---------DOF5.7(2)                     ----------->HVH21                    <---------MYB52(2)                   <---------ZAT2                   --------->At4g35610       <---------ALFIN1                   --------->ZAT2         <---------TCP16(1)                   <---------At4g35610    <---------TCP20                --------->LBD16      <-----------RAV1(1)               --------->HSFB2a(2) --------->ARR14(2)          <---------ANAC58         <---------GLK1(2)          <---------ANAC58    --------->AtLEC2                                    <---------At5g28300 --------->GT1 <---------HSFB2a(2) <---------ARR14(2)                            <-----------GT1   actgtaacatttgggttcccgagctaacggcaatgcagattgtggctccacatacccattgtctcagattgagaaactctaaattaccatgtagtcttgt  6218700                                                                                           <---------TOE2(3)                                                                                   --------->ANAC58                                                                                   --------->ANAC58                                    <---------AtLEC2                            ----------->HVH21                         --------->TOE2(3)                                    --------->ANAC58                         --------->TOE1(3)         --------->HSFB2a(2)        --------->ANAC46-------                   --------->At4g35610             <---------HSFB2a(2)        --------->ANAC58<------                   <---------At4g35610 --------->WRKY38(1)            <----------DOF2     ---------->DOF2   tgatgtctcatcactgaaggaagctaaacttaacatttgcattgactcattttctaaaaccatcaaggctgactttcttcaagtcacgctgttaaagatg  6218800                                    ----------->GT1                                 <---------ANAC58                                 <---------ANAC58                       --------->At4g35610                                                        ---                       --------->HSFC1(2)                                                         <--                --------->ALFIN1 <---------ANAC46                                             -------               ------->MYC3     <---------MYB46(3)                                            -------   --------->DAG2      <---------HSFC1(2)                           <---------AHL20(2)     <------ZmHOX2a(1)  ---------->DOF2     --------->GLK1(2)              <-------TEIL  --------->ICU4        <---------TOE2(3) -->ARR11(3)   <-------MYC3  <----------DOF2    <-----------RAV1(2)<---------YAB1   <---------TOE2(3) ---ARR11(3)  <---------ANAC46  --------->MYB55(2)  <--------P----------->GT1   <----------DOF2------   ttggaaaagttgcacaacgtggagaagcttactttgggtggaaactttcttcaggtagatggactagttattatttgtttttctttaagtttaggaatgt  6218900                                                                              --------->ZAT2                                                                              <---------ZAT2                                                                <---------AHL20(2)               <---------AtLEC2                              --------->ARR11(3) ------>AHL20(2)                                   <----------DOF2          ------>NtERF2 -------AHL20(2)                                <---------ARR11(3)     <---------MYB52(1)        <--- -->ICU4  <---------ARR14(2)                    <---------AHL20(1)    --------->At4g35610        ---- ---->GT1 ---------->TaMYB80                    --------->ARR11(3)<-----------GT1 <---------ANAC46--- ----->GT1--------->ARR14(2)         <-----------GT1         <---------ARR11(3)  <-------TEIL<-------   ttaaatctatggtatatgcatggtactgaatacagcgttttgctattcaatatcttttatgtagattttatccgttgccgagcttcgtggtgtccctttc  6219000  Previous    Next  AGI:  At3g18150.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G60180.1); contains domain no description (G3D.3.80.10.10); contains domain RNI-like (SSF52047) Range:  from: 6218486    to: 6219506    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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