Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                              <-----------GT1                  <---------At4g35610     <-----------GT1                       <---------ARR14(2)                    --------->At4g35610    <---------ARR11(3) -MYB46(1)             --------->ARR14(2)                <-----------HVH21          <---------AHL20(1) -MYB83                <---------GLK1(2)           ------>ZmHOX2a(1)       --------->ANAC58 ----->GT1<-----------RAV1(1)  --------->TOE2(3)   <----------DOF2         --------->ANAC58   taacaaatcaaattgttgcaattcggatttttacctctatataagatgatgtccttttgtgtcatctccctatgcataagcatcaatatactttctactt  6191200                                                                  <----------ID1                                                              --------->AHL20(2)                                                              --------->YAB1                                                           --------->YAB1                                                          <---------YAB1                                                         <---------AHL20(2)                                                         --------->AHL20(2)                                                       <---------AHL20(2)                                                    --------->AHL20(2)                                                    <---------AHL20(1)                                                    --------->AHL20(1)                                                    <---------AHL20(2)                                                   --------->AHL20(2)                                      --------->AHL20(2) <---------AHL20(1)              --------->TOE2(3)       <---------AHL20(2)--------->YAB1             ----------->GT1       --------->WOX13(1)  <---------YAB1 ---------->DOF2    ----------->GT1     ----------->GT1<---------AHL20(2)--------->AHL20(1)       <----------DOF2 <--   acgaagtcgttacaaatgttaaatgttagtaaaaaatcaattaaataaactcattatattataataaaaaaacaaagacaattactttctcacattcttt  6191300                                                                     --------->ARR11(3)                                                                    <---------CCA1(2)                                                                   <---------ARR11(3)                                                                   --------->ARR11(3)                                                           <------MYB46(1)                                                           <------MYB83                                                           ----------->GT1                                                       <---------ARR14(2)                           <                                                       --------->ARR14(2)                       <----                            --------->AHL20(2)     <-----------------AGL2                      ------         <----------DOF2    <---------AHL20(2)   <---------ARR14(2)<---------AHL20(1)        -------- ---------GT1 --------------->AGL15              --------->ARR14(2)--------->AHL20(1)    <---------AHL20(2)   tcaccaaaattctttacatagtttagaaaattatatgatatatagttttaaaatccgaatttggtgaaatatatctagttttatttagtattcaatttta  6191400        <---------ANAC58                                                                <-------TEIL        <---------ANAC58                                                             <------MYB46(1)      <---------YAB1           --------->AHL20(2)                                    <---------DEAR3(2)      --------->ICU4           <---------AHL20(2)         --------->ZAT18            <---------MYB46(3)    <---------ICU4           <---------YAB1 ------>MYB83  <---------ZAT18           <---------TOE1(2) --------->YAB1            <---------AHL20(2) <---------DAG2                        <---------TOE2(2) -------TEIL              --------->AHL20(2)------>MYB46(1)          ------------>CBF<------MYB83 -----AHL20(2)  --------->TOE2(3)   --------->AHL20(2)    --------->ZAT14   <-----------GT1 --->AHL20(2)   <---------DAG2--------->AHL20(2)   --------->ZAT6   --------->YAB1 <---------MYB52(1) ->YAB1<---------ICU4  ------>ZmHOX2a(1)    -------->P ---------->DOF2    --------->AHL20(2)   aattcataatgcttacagccttatcctatttattaaaaaaaaatccaacctttccactaatgcactcccataacaatttaacatcgttggttcatgtatt  6191500                                              <------------CBF                                           ------------>CBF                                           --------->MYB46(3)                                          --------->ANAC58               <---------WRKY12                                          --------->ANAC58              --------->WRKY18(1)                                          --------->ANAC46             --------->At5g28300                                     <-----------GT1                   <-----------HVH21                                     --------->ARR14(2)               ----------->GT1                                     --------->ARR11(3)            ------>MYB46(1)                                     <---------ARR14(2)            --------->MYB52(1)                                    --------->RVE1(1)             --------->MYB55(1)                        ---------->DOF2--------->MYB46(3)        --------->AtMYB61               ----                   <----------DOF2  --------->CCA1(1)      --------->LBD16    --------->TOE2(3)  ----               --------->DAG2   ----------->TBP --------->YAB1 *TSS------>MYB83       xxxxxxxxxxxxxxx             ---------->DOF2    --------->AHL20(2)      ------>ZmHOX2a(1)<---------WRKY38(1)  <------   atttgttttgaaaacaaaaggcttttaaaagcctataaatatccacccaattgttatcctccccaaaccaaacggtcaaacctcactcaccatgagacac  6191600                                                               ------>ZmHOX2a(1)                                                           <---------ARR11(1)                                                           <-----------ARR10                                                           --------->ARR14(2)                                                           --------->GLK1(2)                                     ------>ZmHOX2a(1)    <---------ARR14(1)                       <- --------->At4g35610              ------>ZmHOX2a(1)   --------->LBD16   --------->LBD16            -- <---------At4g35610             <---------ALFIN1     ------>NtERF2     --------->At4g35610       <-- ----->TOE1(3)                 ------>ZmHOX2a(1)     <---------DEAR3(1) <------NtERF2        -------- ----->TOE2(3)           ------>ZmHOX2a(1)          <---------LBD16     <---------At4g35610 --------- xx>smallRNA(se3)     ------>ZmHOX2a(1)     <----------DOF2<---------ARR14(2)   <----------ID1   <--- ---ALFIN1     <------------------------ANAC81    --------->DEAR3(1)<-----------HVH21       <--------   cttagctcacctccatggcctctcctccttctcctcctcctctcttctttcacctccggcgaatcctctctgtccgcagaaaaaaacaaattgcacaccg  6191700                                                     <---------At4g35610                                                     --------->At4g35610                                                     <---------ZAT2                                                  --------->TGA2(2)                                                 <-----------TGA1                                                 <-----------HVH21                                                --------->TGA1a                                                <---------O2                                                --------->ANAC58                                                --------->ANAC46                                                <---------TGA1a                                                --------->O2                                                --------->bZIP60(2)                                           ===============MYC_MYB                                           --------->ANAC46                                           --------->ANAC58                                           --------->RAP2.6(2)                                           --------->DEAR3(1)                                           --------->ANAC58                                           ------->GAMYB                                          --------->DEAR3(2)                                          ================MYC_MYB                               <---------ANAC46 <---------bZIP60(1)        --------->ZAT14        <---------ANAC58 --------->ANAC58        --------->ETT(2)       <---------ANAC58 --------->bZIP60(1)      <---------At4g35610     <-------TEIL<------------AtMYB77                                     <-      --------->At4g35610   <---------GLK1(2)   <<<<<<<<<<AtbZIP1                          --------->ATERF1(1) --------MYB46(3)           <---------ARR14(2) ------>NtERF2                             <---------MYB46(3) ------->ABI4(2)            --------->ARR14(2)<---------ALFIN1                           --------->MYB52(2) -------AtMYB61        ---------->DOF2  --------->ARR14(2)                               <---------ANAC58 ->MYB52(1)            --------->MYB52(1) --------->MYB46(3)                             <---------ANAC58 >ANAC46<---------ZAT14===================================bZIP_DOF                     <-----------HVH21 ------MYB52(1)       ------>ZmHOX2a(1) <---------ARR14(2)                      <---------ICU4    --- -ALFIN1<---------ETT(2)   <------ZmHOX2a(1)<-----------HVH21        <---------------------WRI1   ---   gtggtctcagtagacagagttttcctaaaggattcgtgtttggaaccgccacgtcagcttatcaagtcgaaggcgagactcatcaagacggtcgtggccc  6191800                                                           <---------ANAC55(2)                                                         <-----------GT1                                                         --------->AHL20(2)                                                      <---------ICU4                                                     <---------AHL20(2)                                                     --------->AHL20(2)                                                     <---------YAB1                            ------                           --------->LBD16        <---------AHL20(1)                       --------->AHL20(2)                           ------>ZmHOX2a(1)      --------->AHL20(1)                       <---------AHL20(2)                          <---------ANAC46  <-----------GT1--------->ANAC55(2)             --------->AHL20(1) --------ATHB12        --------->GLK1(2)  --------->AHL20(2)      <-----------GT1       --------->YAB1 ------>ANAC58        <---------GLK1(2)   <---------AHL20(2)  <---------ICU4          --------->AHL20(2) ------>ANAC58      --------->ICU4 <-----------GT1<---------ARR11(3)                  <---------AHL20(2)   aagcatttgggatgccttcgtcaagattcctggtaattcactatttaaacaatatataattacataattaacaattgttaactaatataaaaataaaata  6191900                       --------->ANAC58                       --------->O2                       --------->TGA1a <---------ZAT18                       --------->ANAC58--------->ZAT14         ------>ZmHOX2a(2)             --------->WRKY12        <------ZmHOX2a(2)        --------->MYB52(1)       --------->ARR14(2)<---------ZAT2--------->WRKY38(1)         <-----------GT1       <---------ARR11(3)<---------At4g35610                 <---------ARR11(3)     ------->TEIL   <-       --------->ARR11(3)--------->At4g35610      <---------At5g28300  --------->ZAT14         <-----       <---------ARR14(2)--------->ZAT2<---------ZAT14      ----------->GT1        <---------CCA1(2) --->AHL20(2)         <---------LBD16 --------->ALFIN1<---------MYB52(1) --------->YAB1       -------   aacagggaagatcgccaagaatgccacggctgagataacagtggaccagtatcaccgttacaaggtattaaactatactaatcttgaatcttactaaata  6192000                                            <-------MYC2                                            ------->MYC2                                            ------->MYC3                                          ------->TEIL                                        <-------TEIL                                       --------->AtLEC2                                    <-------TEIL                    <------ZmHOX2a(1)   <---------------AGL15        ----------->GT1      <---------ARR11(3)       --------->ARR14(2) ----------GT1             --------->AHL20(2)        --------->ARR11(3) --------->ARR11(3) ----ICU4                 --------->AHL20(2)<-------MYC3  <-----------GT1     <---------ARR14(2) -->ICU4    ---------->DOF2<---------AHL20(2)      <---------YAB1<---------LBD16   ttatccaaatattagaaagtgtttttgatttaattagttacatgcatgtgttcatgatattcacatttcaggaagatgtggatttgatgaagaaactgaa  6192100  Previous    Next  AGI:  At3g18080.1    Description:  glycosyl hydrolase family 1 protein. similar to glycosyl hydrolase family 1 protein [Arabidopsis thaliana] (TAIR:AT3G18070.1); similar to beta-mannosidase enzyme [Lycopersicon esculentum] (GB:AAL37714.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO68163.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN74265.1); contains InterPro domain 6-phospho-beta-galactosidase, eukaryotic; (InterPro:IPR011580); contains InterPro domain Glycoside hydrolase, catalytic core; (InterPro:IPR013781); contains InterPro domain Glycoside hydrolase, family 1; (InterPro:IPR001360) Range:  from: 6191563    to: 6194458    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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