Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                     --------------->AtSPL8                   <---------------AtSPL8          --------->AHL20(2)                                                       <---------YAB1          <---------AHL20(2)                                                     -------->ATHB1          --------->AHL20(1)          --------->At4g35610------>ZmHOX2a(1)       <---------ICU4       --------->YAB1         --------->YAB1--------->TOE2(3)                   <---------ATHB51    - --------->GT1--------->AHL20(2)<---------YAB1       --------->ARR14(2)         <---------AHL20(2)--- --------ANAC58    --------->DAG2    --------->ANAC58--------->GLK1(2)          --------->AHL20(2)<-- --------ANAC46   ---------->DOF2    --------->ANAC58------->TEIL     --------->ANAC55(2)   --------- --------ANAC58--------->AHL20(2)--------->YAB1      <---------ARR14(2)         --------->ICU4    <--   agcgtttaaaaataaaataaaaaagtactcaaatatgataagctaaacttaaacgaatccttccaaactcttatgtattgaaattattaacaaataacag  6180500                                                                                                    <                                                                                                   --                                                                                              -------                                                                                              <------                                                                                              -------                                                                                             <-------         <------ZmHOX2a(2)                                       <-----------GT1             <-------      <---------ETT(2)                                     --------->LBD16                   --------    <-----------HVH21                                     --------->O2                       -------- ------>TEIL                            --------->AtLEC2  <---------ANAC46                   -------- ------>ZAT14              <----------DOF2                <---------ANAC55(2)                -------- -------ZAT14             ------>ZmHOX2a(2)               --------->ANAC55(2)          <---------TOE2(3) >MYB52(1)              --------->ARR11(3)            <-----------HVH21                <---------TOE1(3) -------ZAT18           <---------ARR11(3) ---------->DOF2<---------O2 ------->GAMYB<---------MYB52(2)   tgaacctgtcgatcacttgcctctgtgatctttcaagtttcaatgcaaagaacaatcgtcccgtgattcacaaccctcaatattcaactaaggttaccct  6180600      --------->ICU4    --------->YAB1 <---------ANAC55(2) ----------->GT1 --------->ANAC55(2) ---------ICU4 ------->ICU4 -->TOE2(3) ---------AGL15 -------->AGL15                              <---------ZAT2                             ------>ZmHOX2a(1) ----------AGL1                              <------NtERF2                      --------->ATHB51 ----------AG                --------->YAB1  --------->ZAT2                     --------->YAB1 --------->AGL1          <---------ICU4     ------>NtERF2                 <-----------GT1<---------REM1(2) --------->AG           --------->ICU4    <------NtERF2         ----------->GT1 -------->ATHB1 --------->AGL2         <---------YAB1  --------->ETT(2)   --------->AHL20(2)  <---------YAB1 --------->AGL3 <---------YAB1  --------->AHL20(2)     <---------YAB1   <---------AHL20(2)<---------ALFIN1   aataagtaataatccaatatgatttcattattcataaaatagtcgccagcatggattacgattaaaaagtttattttttctattattgtcctacacactg  6180700                  --------->YAB1            <---------TOE2(3)           <---------DOF5.7(2)                                              <---------AHL20(2)         --------->DOF5.7(2)                                           <---------ATHB12  <---------AHL20(2)       <---------ZAT6                                         <---------AHL20(2)       <---------YAB1     <---------ANAC46                                        <---------AHL20(2)     --------->ICU4---     <---------ANAC58                     <---------TOE2(3)  --------->AHL20(2)    --------->TOE2(3)     <---------ANAC58           ----------->GT1--------->ATHB12  <-----------GT1<-----------GT1   ---   aaaaatggagtgttaacgaagcataagaaatgttttgtaattttaagaatgtttgatcacaaatttttttccactgatttttttacattattaaaactaa  6180800                                                        <---------AHL20(1)                                                        <---------AHL20(2)                                                        --------->AHL20(1)                          ----------->GT1           <---------RVE1(1)                       <------------CBF  ------>ZmHOX2a(2)                     <---------AHL20(2) <------ZmHOX2a(2)                     --------->AHL20(2)<---------ARR14(2)                     <---------AHL20(1)--------->ARR11(3)        *TSS                     --------->AHL20(1)<---------ARR11(3)       --------->ANAC46          ---------->ID1 ------>YAB1        --------->AHL20(2) --------->ARR14(2)   <-----------GT1           <----------DOF2 ------>AHL20(2) <---------ZAT6       <---------GLK1(1) --------->AHL20(2)          <---------DAG2  <   taaaaaaactgacttagtagtattaaattggtatatatcgagatcccatttgtgatattttattacacatctcttccagtctctcactctttgtccctct  6180900                                                <------NtERF2                                               ------>NtERF2                                              --------->ANAC58                                              --------->ANAC58                                              --------->ANAC46                                             ------->MYC2                                             <-------MYC3                                             <-------MYC2                             ------>NtERF2   ------->MYC3                             --------->LBD16--------->ANAC46                   ------>ZmHOX2a(1)                            <---------ANAC46--------->ANAC58             --------->At4g35610                           <---------LBD16  --------->ANAC58        <---------ICU4 ----------DOF2      ------>ZmHOX2a(1)    <---------ALFIN1          --------->YAB1 <-----------GT1   ctctttctctattactctgtctcctctgttccggcgatgttccaacacgcgccttcttccatttccctcatcatcatcttcctcttcaccattctatcac  6181000                                                                                                   <-                                                             <---------ARR14(2)                   <--                                                             --------->ARR14(2)                 -----                                                          --------->YAB1                        <----                                   <-----------HVH21      --------->AtMYB61                  <-------               ----------->HVH21 --------->LBD16     --------->LBD16                         --------              <-----------HVH21 <---------ANAC58    --------->ANAC58     --------->LBD16     --------          ------->TEIL          <---------ANAC46    --------->ANAC58    --------->ANAC46     <-------       ----------->HVH21        <---------ANAC58    --------->ANAC46    --------->LBD16     ---------     <---------At4g35610  ----------------->AGL1    --------->ANAC55(1)<---------LBD16      <--------     --------->At4g35610--------->ANAC58           --------->MYB46(3)  --------->HSFB2a(2)  ------>NtERF2     <-----------------AGL1    <---------LBD16     <---------LBD16     <---------HSFB2a(2)<---------LBD16     ----------->RAV1(2)--------->ANAC58         ------>NtERF2     <----------DOF2      <-----------GT1     ----------------->AGL1  <---------ARR14(2) <---------ALFIN1--------->ANAC46     --------->GLK1(1) <-----------HVH21    --------->ZAT14    <---------ATHB12--------->MYB46(3)   --------->WOX13(1)-----   ccgtttcacctgaaccggtcacagtccagccattccgggtcaaatcatccccacccgcaaccatacccgctttcccggagcaatccgatttctccggctg  6181100                                                                                              -------                                                                                             <-------PIF5                                                                                             <-------MYC2                                                                                             ------->PIF5                                                                                             ------->MYC2                                        <---------At4g35610                                  ------->MYC3 --------ALFIN1                         --------->ZAT2                                       <-------MYC3 -------ZAT18              --------->bZIP60(2)                                              <-------- ->NtERF2                  --------->ANAC58       <------NtERF2 ===================================== -----At4g35610            --------->ANAC46      --------->RAP2.6(2)                        <------NtERF2 --ZAT2                    --------->ANAC58      ----------->RAV1(1)                        --------- ->ZAT2    <---------HSFB2a(2)          <---------ZAT2 --------->DAG2                       <-------- ->At4g35610              <---------LBD16      <---------At4g35610                          <-------- --At4g35610     <---------ARR11(3)     --------->At4g35610     ---------->DOF2            ------>NtERF2 >LBD16 <-----------GT1  <---------ALFIN1      --------->At4g35610                --------->LBD16 -ATERF1(1)--------->HSFB2a(2)     --------->ANAC58   ---------->DOF2    <-----------RAV1(1)<-------- ---->At4g35610  --------->ARR11(3)--------->ANAC58   ===============================================   cccactcgatttaccagaagacctcttccacggcatcaagtcagcttgcagcggcaaaaagctccacaaaggaaaatgttgccccgtactaggcgcgtgg  6181200                                                     <---------GLK1(2)                                                   --------->ANAC58                                                ------>NtERF2                                                --------->LBD16                                                <------NtERF2                                               --------->DEAR3(1)                                               --------->RAP2.3(2)                                               --------->ANAC46                                               --------->RAP2.6(2)                                               --------->RRTF1(3)                                               --------->RRTF1(2)                                               --------->RAP2.3(3)                                              <------NtERF2                                              --------->ATERF1(1)                                              --------->RAP2.3(1)                                              --------->ERF1                                              --------->RRTF1(1)                                             --------->ABI4(1)                                             ------>NtERF2                                            --------->DEAR3(1)                                            <---------DEAR3(1)                                            --------->RRTF1(3)                                            --------->ANAC46                                            <---------ATERF1(2)                                            --------->ATERF1(2)                                            <---------ALFIN1                                            --------->RRTF1(2)                                            --------->RAP2.3(3)                                            --------->RAP2.6(2)                                            --------->RAP2.3(2)               --------->DOF5.7(2)                                           --------->RAP2.3(1)                --------->At5g28300                                           --------->RAP2.6(1)              <------NtERF2                                           --------->RRTF1(1)              <---------LBD16                                           --------->ATERF1(1)             <------NtERF2                                           --------->ERF1                  --------->LBD16                                           --------->ORA47(2)              ------>NtERF2                                          <---------RAP2.3(1)             --------->DEAR3(1)                                          <---------At4g35610            --------->ATERF1(1)      <---------At4g35610                 <---------ATERF1(1)           --------->LBD16           <--      --------->At4g35610                 ------>NtERF2                 <---------ATERF1(1)       --- <---------ZAT14                <---------MYB52(1) --------->ANAC46     ------>NtERF2            ---- --------->ZAT14               <---------SPL7<---------ATERF1(1)       <---------ALFIN1          ---- -->ALFIN1                   --------------->AtSPL3--------->ANAC58    --------->ANAC46          <--- -TGA1a                    --------->ANAC46--------->DEAR4(2)          --------->DEAR3(1)        ---- =bZIP_DOF           <---------ZAT14      --------->LBD16            <---------ATERF1(1)         <--- >ALFIN1             --------->ZAT14      --------->At4g35610        ------>ZmHOX2a(1)         ------ -ANAC58         --------->AtMYB61       --------->ANAC46           <---------ALFIN1     ------>ZmHOX2a(1) -ANAC58         <---------ALFIN1       <---------LBD16           ------>ZmHOX2a(1)    ----------->RAV1(2) -ANAC46        --------->MYB46(3)    --------->ARR14(2)         <---------ALFIN1 --------->MYB46(3) =bZIP_DOF      <---------MYB55(2)   <---------GLK1(1)         ------>ZmHOX2a(1)<---------DOF5.7(2)   ctctactctgcttactcaaccactgctctaagccgttcgatttccgccgccgcaagaaactcatcctcctcctccgccgcggtaacgactcctgaagaag  6181300                                                                                                    <                                    <-----------------AGL1                                          -             --------->LBD16      --------->WRKY45                                                  -            --------->HSFB2a(2)   ----------->HVH21                                                 <        <---------ANAC58          --------->WRKY38(1)                                               <        <---------ANAC58          --------->WRKY12                                     --------->SPL7    <----------DOF2             <-------GAMYB                                         ------>MYB46(1) -------GLK1(1)                <---------ANAC58                                       ------>MYB83  - ------>CCA1(2)                <---------ANAC46                                       --------->MYB52(1) ----->ARR11(3)            <---------ANAC58                                          <---------SPL7 - ----->ARR11(1)            <---------ANAC58     --------->GLK1(1)                   <---------MYB59 - ------ARR11(3)     <---------LBD16 <-----------------AG                   <---------ZAT18          < ----->ARR14(2) --------->WRKY38(1)<---------DOF5.7(2)                   <---------At4g35610     ---- ------ARR14(2) ----------->HVH21--------->DOF5.7(2)         <------NtERF2 --------->ZAT18   <------- ----->ARR10<---------HSFB2a(2)<---------ANAC58 <---------GLK1(1)        --------->At4g35610 <-------   atatgcctttgcttcccgatgactcggagacttgcgttgacggattagggaaatctctgaggcagagagggattgagctcactagaccgaacgagacttg  6181400  Previous    Next  AGI:  At3g18050.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT4G28100.1); similar to unknown [Populus trichocarpa] (GB:ABK95654.1) Range:  from: 6180865    to: 6182860    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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