Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                            <-------TEIL                         --------->CCA1(2)                         --------->ARR14(1)                        <---------ARR14(2)                        --------->ARR14(2)                        <---------GLK1(2)                         <---------ANAC46                 <-                        --------->ARR11(1)                        <---------ANAC55(2)              --               --------->DAG2                        --------->ARR11(3)                       -------          --------->AHL20(2)                         <---------ARR11(3)              ------>ZmHOX2a(2)          <---------AHL20(2)                       <---------ARR11(3)               <------ZmHOX2a(2)         --------->AHL20(2)            --------->YAB1--------->AHL20(1)            --------->ARR11(3)   <-----------GT1  ---------->DOF2   <---------YAB1--------->CCA1(2)              <---------ARR11(3) <-----------GT1----------->GT1 <---------ZAT14    --------->ARR11(3)        <---------YAB1   ------- -----RVE1(1) ---------->DOF2   --------->ZAT14  <---------TOE2(3)<---------YAB1<---------WOX13(1)<--   atttttctctatttaataaagtaaaagattcgactgtagtatgatagtattgagatatattctaaattatgtataaagtttgatagatcccaagggaccc  6154000                                           <---------ALFIN1                                          ------>MYB83                                          -------->P                                          ------>MYB46(1)                                        <---------MYB111(2)                                        --------->AtMYB61                                        <---------MYB55(2)                                        <---------ALFIN1                                        <---------MYB111(1)                                        --------->MYB46(3)                            --------->ARR14(2)                            --------->GLK1(2)  --------->LBD16 --------ARR14(2)           <---------ARR14(2) <---------------AGL15                               -- ------->ARR14(2)          <---------GLK1(2)------->GAMYB           <-----------GT1                -- -->ANAC58          <------ZmHOX2a(2)  --------->MYB46(3)       <---------AHL20(2)  <---------AHL20(2) -->ANAC58   <---------ATHB12   ------>ZmHOX2a(1)---------->DOF2--------->AHL20(2) --------->AHL20(2) -------CCA1(2)     ===================HOX2a_HOX2a       <---------WRKY38(1) --------->MYB52(1) -----   aaatctcgttccccaatgagcgatctagagattcctcttccaccaactccccaaagtagtcaacatttttttaccaaaacaacgatttatttgtagaata  6154100                                                              --------->TOE1(3)           --------->TOE2(3)                                                              --------->YAB1              --------->TOE1(3)             --------->ARR11(3)                               --------->TOE2(3)        ----------->RAV1(1)             <---------AHL20(1)                      --------->AHL20(2)            <---------At4g35610             --------->AHL20(1)                     --------->AHL20(1)             --------->At4g35610     <---------ETT(2)                               <---------AHL20(1)           --------->bZIP60(1) ------->GLK1(2)                                   --------->AHL20(2)            <---------bZIP60(1) ------->ARR11(3)      --------->AHL20(2)        --------->AHL20(2)           ----------->HVH21     - ---->AHL20(2)         <---------AHL20(2) ----------->GT1  <-----------GT1 --------->ATHB12         <   aaatctgtcaacatatatattgcatataaatgcaattgcaaatgtagttaaaaatatatataaaccataacttaaaatgagtgacagcacaacattaact  6154200                 --------->MYB52(1)                <-----------GT1               <---------YAB1             <---------ICU4                                   --------->MYB52(1)             --------->YAB1                                   <---------At5g28300            --------->ICU4                                   <<<<<<<<<GT-2            <---------YAB1                                   <-----------GT1          <---------ICU4                                 <---------AHL20(2)          --------->YAB1                         <---------CCA1(1)         <---------YAB1                          <---------RVE1(1)   --------->ATHB12       ---------         --------->ICU4                         --------->ARR11(3)------>MYB83  <---------At5g28300<- -------->ARR14(2)                              <---------ARR11(3)------>MYB46(1)     ----------->GT1 ---------ARR14(2)                     --------->AHL20(2)--------->AHL20(2)    <-----------GT1 <-----   aaaatacgcttattattattaccggttttgaccaaaacaaaaaaaatggagatatttgtttaattaccgactgatttgattttacagtctgtaaaaaagg  6154300                                                     --------->bZIP60(2)                                                --------->ANAC46                                              =================RAV                     <---------MYB52(1)       <-----------RAV1(2)                  <------NtERF2             --------->ANAC58                                     ----                 ------>NtERF2              <------NtERF2                                    <-------                <---------ALFIN1            --------->ANAC58                                 --------                --------->DEAR3(1)         --------->ZAT18                           --------->CCA1(2)              <-----------TGA1             ------>NtERF2                             <------ZmHOX2a(2)             --------->ANAC46             <---------ANAC46                          <---------ARR11(3)             --------->ANAC58             <---------ANAC58                          <---------AGP1             --------->bZIP60(1)          <---------ANAC58                          --------->ARR14(2)             --------->ANAC58            --------->ZAT18                            --------->AGP1           --------->MYB52(1)            <---------ZAT18                            <---------ARR14(2)       <---------TOE1(2)             --------->DAG2  --------->REM1(1)              --------->ARR11(3) ->DOF2<---------TOE2(2)            ---------->DOF2----------->RAV1(1)    ---------->ID1     -------- -----NtERF2 <---------bZIP60(1) --------->YAB1 --------->ANAC58       <----------DOF2------>ZmHOX2a(2) -----ID1  <---------DOF5.7(2)  ----------->TBP --------->ANAC58  <---------ALFIN1 <---------CCA1(2)   ccgaagtcgaaggtaacgccaccgttttccacctataaaaaagggcgcgcaggcaacatcacactctcacactcttttcgctctcagatctgaaacctta  6154400                                                                     <------ZmHOX2a(2)                                                                    --------->ARR11(3)                                                                   --------->At4g35610                                                                --------->LBD16                                                          <---------MYB52(1)                                                          --------->WRKY18(1)         --------->AGP1                                                     --------->ARR14(2)               <---------ARR14(2)                                                     <---------ARR14(2)               --------->ARR14(2)                                                 ===========================HOX2a_HOX2a     <--------                                                 <------ZmHOX2a(1) <---------At4g35610--------->ARR11(3)                                         --------->ZAT2  <-----------HVH21  <---------HSFB2a(1)     <                --------->ARR14(2)       <---------ZAT2------>ZmHOX2a(2)    --------->HSFB2a(1)    --    <-----------GT1     --------->ALFIN1 <---------At4g35610   ------->GAMYB<---------HSFC1(2)     <- ----->At4g35610<---------ARR14(2)       --------->At4g35610  --------->MYB46(3)      <---------ARR11(3) --DAG2       --------->LBD16           ----------->RAV1(1)<---------WRKY12 --------->HSFC1(2)    --- ->TOE2(3)   --------->LBD16         <---------REM1(1)<------ZmHOX2a(2) --------->ANAC46    --------- ->TOE1(3)  <---------LBD16<---------ANAC46      =============HOX2a_HOX2a  ------->TEIL<------ZmHOX2a(2)   tctgaattacatttccccgattcgacgttgtgcgaattgatgcagcagagaggacgatccgtcaaccgcagatcacgaagcttctctagatccagactcg  6154500                                                    <---------MYB52(1)                                                 ---------->ID1                                         ------>ZmHOX2a(2)                                        <------ZmHOX2a(2)          --------->ANAC46                                       <---------AGP1              --------->ANAC58                                       --------->AGP1              --------->ANAC58                                       --------->ARR11(3)        --------->MYB52(1)                 <       --------->ZAT18                 <---------ARR11(3)      <---------MYB52(2)                   -     --------->ANAC58                  --------->ARR14(2)      --------->MYB46(3)                   -     --------->ANAC58                  <-----------ARR10     ------>NtERF2                      <---- -GLK1(2)--------->At4g35610           <---------ARR14(2)   --------->ANAC46                   ------ ------NtERF2                          <---------ARR14(3)   --------->LBD16                  -------- ---->NtERF2                           --------->ARR14(3)   <---------ETT(1)               <---------SPL7 ----------HVH21                      <---------CCA1(2)    --------->HSFB2a(2)          <------------ ------>DEAR3(1)           <---------ALFIN1   <<<<<<<<<TBF1<---------HSFB2a(2)        <------NtERF2 < >ARR14(2)      <-----------GT1      ----------->ARR10  <-----------GT1 <---------GLK1(1) --------->TOE2(1)   ccgtcgaaggccactgaattactctctcccctctcttggcagatcttcttcttcgttttttcccgacaaacgacatttccgaaatggctgcatcgtacgg  6154600                                         <---------AHL20(2)                                         --------->AHL20(2)                                        --------->YAB1  <------ZmHOX2a(2)                <---------ANAC58 <---------ARR11(3)                <---------ANAC46 --------->ARR11(3)                <---------ANAC58 ---------At4g35610             <---------WOX13(1) -------->At4g35610            <---------ANAC58 -------->bZIP60(1)            <---------ANAC58 -------HVH21                 <---------MYB46(3) ----->GT1--------->YAB1      --------->ATHB12 ->SPL7  <------ZmHOX2a(2)  <---------MYB52(1)                   ---------->DOF2 ------SPL14             <---------YAB1<---------------AGL15  <---------TOE2(3)        --------->ATHB12 ---------bZIP60(1)      <---------TOE2(3)                <----------DOF2     ----------->GT1   tgagatcaccgatcatatgcttcgattatcgttgattgcttatattaatagaaattggagatttatggaaagagaagagactgtgaaattgatttgattt  6154700                                                                                  <---------REM1(1)                                                                                <-------GAMYB                                                                               <---------MYB46(3)                                                                           ----------->HVH21                                                                         --------->At4g35610                                                                         <---------At4g35610                                           --------->At4g35610          <---------ARR14(2)        <--                                           <---------At4g35610          --------->ARR14(2)     <-----               <---------ANAC58     <---------ARR11(3)              --------->LBD16            <-----               <---------ANAC58 <---------ANAC58     --------------->AGL15------>ZmHOX2a(2)  <-------               <---------ANAC46 <---------ANAC58  <-----------GT1   <---------At4g35610    --------->YAB1        <---------YAB1          ----------->GT1<---------ICU4       --------->At4g35610   <---------YAB1   gttttttgttatttttggggtgagtagaagaagagcgtgatattcagaagaattactggatagagcattccgctgatctgactgttgaagctatgatgct  6154800                       --------->ANAC58                       --------->ANAC58                    <---------REM1(2)            <<<<<<<GRF7                ------>ZmHOX2a(2)              ----------->HVH21         --------->GLK1(2)                   ----------->RAV1(2)      <---------ARR11(3)       --------->HSFB2a(1) -------WRKY18(1) <---------ETT(2)      <---------SPL7 ----ANAC58     ===========================HOX2a_HOX2a ----ANAC58   --------->ARR11(3)    ------>ZmHOX2a(1)          --------->ANAC46    --------->ATHB12 --YAB1<---------At4g35610     <---------HSFB2a(1)       --------->AHL20(2)      <---------WOX13(1)--   tgactcgagagcttctgatctcgacaaggaagaacgtcctgaggtacccctgacattttttatataagacatttgaatcagtgaatgattttagagaatt  6154900  Previous    Next  AGI:  At3g17998.1    Description:  CPuORF30 (Conserved peptide upstream open reading frame 30) Range:  from: 6154369    to: 6157557    Orientation: Forward Links:  TAIR  MIPS    AGI:  At3g18000.1    Description:  NMT1 (N-METHYLTRANSFERASE 1); phosphoethanolamine N-methyltransferase. Identical to Phosphoethanolamine N-methyltransferase 1 (NMT1) [Arabidopsis Thaliana] (GB:Q9FR44;GB:Q9LVH3); similar to phosphoethanolamine N-methyltransferase 2, putative (NMT2) [Arabidopsis thaliana] (TAIR:AT1G48600.1); similar to phosphoethanolamine N-methyltransferase 2, putative (NMT2) [Arabidopsis thaliana] (TAIR:AT1G48600.2); similar to phosphoethanolamine N-methyltransferase [Arabidopsis thaliana] (TAIR:AT1G73600.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN64744.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO68187.1); similar to phos Range:  from: 6154369    to: 6157558    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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