Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                         <---------ARR14(2)  --------->LBD16                                                                      --------->ARR14(2) --------->ANAC58                                                                      --------->GLK1(2) --------->ANAC58                                                          ---------->ID1 -------->MYB46(3)                                                        <-----------GT1 -------ARR14(2)                                   ---------->DOF2 <---------WOX13(1) <---------GLK1(2) ------>ARR14(2)                 ----------------->AGL1      --------->GLK1(2)     --------->HSFB2a(2) ---ZmHOX2a(1)       <-------GAMYB              <----------DOF2 <---------YAB1    --------->REM1(2)   gaaccgcaagagaaatgttaggcgattgcaagggagccatagaaggtaagctttaaagaacataatctgattgttttttcgccttgtagaatctggcaga  6151700                           --------->ANAC58                           --------->ANAC55(2)                           <---------ANAC55(2)                           --------->ANAC58                          <-------TEIL                         --------->CCA1(2)                         --------->ARR14(1)                        --------->ARR14(2)           --------->MYB52(1)                        <---------GLK1(2)           ------->GAMYB                        <---------ARR14(2)         <---------MYB52(2)                            <---                  --------->GLK1(1)                <---------MYB55(2)                            ----                  <---------GLK1(1)                --------->MYB46(3)                 --------->HSFC1(2)                 <---------ARR14(2)           ------>MYB83            --------->ZAT2  <---------HSFC1(2)             <---------At4g35610      --------->HSFB2a(2)             <---------ZAT2  --------->HSFB2a(1)             --------->ZAT14          <---------HSFB2a(2)             --------->At4g35610       -----             <---------ZAT14  ------->TEIL    ------>MYB46(1)         <---------At4g35610      <-----    --------->TOE2(3)   --------->ARR11(1)  <---------MYB59  <---------CCA1(2)        <---------HSFB2a(1)   atataacataaactctgcagatttcagatacgcacttgtgctggaaccaaacaacaaacgagcgtctctctcagcagagagactgagaaaattccagtga  6151800                       --------->ATHB12                      <------ZmHOX2a(2)                      <---------ATHB12               ----------->HVH21              <---------MYB59            <-----------ARR10            ------->TEIL            --------->SPL7         <---------ANAC58         <---------ANAC58        <---------------AtSPL3        --------------->AtSPL8              ------>ZmHOX2a(1)        --------------->AtSPL3             --------->TOE2(3)      ------------------>SPL14             <---------ANAC46                                   <------  <----------DOF2     =============================HOX2a_HOX2a                                <------ ------At4g35610      <---------YAB1    ---------->ID1                                        <------ ----->At4g35610--------->MYB52(1)    --------->MYB52(2)          --------->ANAC46            <------ ------------------>TaNAC69(2)        <---------MYB46(3)       <---------ARR14(2)        <----------DOF2 ----ZAT18<---------SPL7            <---------MYB52(1)         --------->ARR14(2)<---------ALFIN1   gcttcttttgtccgtacctcaccgatcattgagaaaacgtttgttccttagaatttgtccaagagtataggccaattttgtcaacacttgtcttttgcgt  6151900                                           ------>NtERF2                                        <---------At4g35610   --------->ARR14(2)                                        <------NtERF2         <---------ARR14(2)                                        ------>NtERF2    <---------AHL20(2)                                        --------->At4g35610--------->YAB1                                      --------->ZAT18    --------->AHL20(2)             <------------                                    <---------ARR14(2)   --------->AHL20(1)             ------------- ---RAP2.6(2)               <----------DOF2--------->LBD16<---------YAB1               <------------- ---ANAC58                 <---------DAG2 --------->DEAR3(1) --------->RVE1(1) <-----------GT1 ---ANAC58           <---------ZAT6 --------->ARR14(2)  --------->YAB1        <-----------GT1     <-- ---ANAC46   <---------AHL20(2)  <---------AtLEC2----------->GT1        <---------AHL20(2)        ---   ctgatatttaggcattttatctagagataccttttgcaagtccgccgagaatggaaaattataatatccgatgtttattttaaacgttctctaaaattgg  6152000                                               --------->ETT(2)                                 --------->RAP2.6(3)              <---------ANAC58                               <---------GLK1(1)                  <---------ANAC46                  --------->TOE1(3)            <---------ETT(2)   ----------->GT1            --------->YAB1     --------->GLK1(1)                  <---------ANAC58     --------->DAG2           --------->ARR14(2)              --------->ZAT14    ---------->DOF2         --------->LBD16 --------->LBD16   <---------ZAT14             <---------- ---AGL15   --------->TOE2(3) <---------ARR14(2)            --------->At4g35610--------->ARR11(3)   - -->AGL15  ----------->GT1<---------LBD16 <---------LBD16   <---------At4g35610<-----------HVH21<---- ----AGL3  <---------ZAT6--------->MYB52(1)--------->LBD16  <------NtERF2--------->YAB1<----------DOF2 -------GLK1(1)   --------->YAB1--------->MYB52(1)        <---------WRKY38(1)<---------TOE2(3)  <---- ------>GLK1(1)   --------->TOE2(3)--------->LBD16        <---------WRKY45   --------->MYB59  -------   atatcaaaaagtaatgttaatcttaaacaccggataccggcattcccggtcgacttctagtcagcgtagcgtcaaaaataaggtcatgtctttaactatc  6152100                                        ====================================bZIP_DOF                                   --------->ANAC46                           *TSS   ------>ZmHOX2a(1)                          <---------MYB52(1)                          --------->DOF5.7(2)                        --------->ANAC58--------->ANAC58                        --------->ANAC58--------->O2       --------->YAB1   --------->ANAC46--------->ANAC58  <----------DOF2      <---------TOE2(2)--------->ANAC46  ================================================bZIP_DOF -GT1 <---------YAB1   <---------TOE1(2)--------->TGA1a                <-----------------------TaNAC69(2) --------->ID1        <---------ALFIN1<---------ALFIN1           ---------->DOF2 -----ANAC58       --------->HSFB2a(2)--------->ANAC46--------->AHL20(2)----------->GT1     ------>MYB46(1) -----ANAC58  <----------DOF2    <---------ALFIN1 --------->AHL20(2)   <------ZmHOX2a(1)    ------>MYB83 -->ARR11(3)  ====================================bZIP_DOF ----------->GT1        ---------->DOF2   <   ttgtctttatcattttcttttctcgcacgttatctcctccccacgactcaaaaaaaataaacagaaaaaaagaggagtagaaaccaaagagacctgccct  6152200                                                                                 <------MYB83                                                                                 <------MYB46(1)                                                                                 <---------MYB46(3)                                 ----------->TGA1                     <---------LBD16                                 ----------->HVH21                  <---------REM1(2)     <----------                             <---------GLK1(1)                  --------->ARR11(3)   --------->MYB52(2)                     --------->ANAC46   --------->ANAC58        <-----------GT1  <---------DEAR3(2)                     --------->ANAC58   --------->ANAC58<----------DOF2       <-------GAMYB  --------          --------->YAB1  --------->ANAC58           <---------ARR11(3)      --------->MYB52(2)         <---------YAB1   --------->ANAC58     ---------->DOF2  <---------ARR11(3)  <-------TEIL  <-- ---------ICU4       --------->ANAC58 ---------->DOF2--------->ARR11(3)   <-----------HVH21  <-------   aatatttagcgatgatagtttgaacggaacgaaatctgacgaaagaaactaaagagacctttgaattatcttcacgggtgagttggttcgtttaaccttt  6152300                                            <---------ANAC58                                            <---------ANAC46                                            <---------ANAC58                                            <-------GAMYB                                           <---------MYB46(3)                                           <------MYB46(1)                                           --------->MYB52(2)                                           --------->MYB55(2)                                           <------MYB83                                    <-------MYC3                            ---------->DOF2                         --------->LBD16  <---------AtMYB61              --------->HSFB2a(2)                        --------->LBD16 <-------GAMYB                  ----------->GT1 <----------DOF2      <---------LBD16  --------->ALFIN1                <---------REM1(1)           -- -GT1            <---------DAG2--------->AHL20(2)                --------->DAG2         <------ZmHOX2a(1) ->TOE2(3) <---------MYB52(1)  <---------AHL20(2)    --------->DOF5.7(2) <---------HSFB2a(2)    ----- ---------GT1    <----------DOF2    ------->MYC3    --------->TOE2(3)  <---------MYB46(3)      ------ --DAG2   <-------GAMYB--------->LBD16 <-----------RAV1(1)      ---------->DOF2       <---------TOE2(3)   tttctttatctcggttgtgcttttccccgagaattaaacgtgtgttggttgcagcgttaacaaaaaaaaagggttgtagaaagtgagtaaggaagaaata  6152400                                                                                                   <-                                                                                                   <-                                          =============================HOX2a_HOX2a                 --                                      <---------ANAC46                                             <-                                    --------->LBD16                                               <--                                   <---------DEAR3(1)                                           -----                                  <---------LBD16                                             -------                                  --------->SPL7                                              -------                                <---------ARR14(2)                                    --------->LBD16                                --------->ARR14(2)    --------->MYB52(1)     ------>ZmHOX2a(1)<------                                <-----------HVH21--------->ZAT18------>ZmHOX2a(2)    --------->ANAC55(2)                               --------->ALFIN1--------->ZAT2  <------ZmHOX2a(2)     <---------ANAC55(2)                             <---------ANAC58  --------->At4g35610          --------->TOE2(3) <------      --------->TOE2(3)      <---------ANAC58 --------->ANAC58 =====================HOX2a_HOX2a------  <------ZmHOX2a(1)          <---------ANAC46 --------->ANAC58<---------ARR11(3)  --------->GLK1(2)<- ------->YAB1 <---------TOE2(3)----------->HVH21 <---------ZAT18====================HOX2a_HOX2a<----- ---->YAB1  ---------->DOF2------->GAMYB  ============================HOX2a_HOX2a <---------ARR14(2) --->ICU4--------->YAB1 --------->MYB52(1)<------ZmHOX2a(1)   --------->ARR11(3)  --------->ARR14(2)   atcaggaacattaataaaggaaatgacaacggcgtgtccggcgaggacaagctcactaatggacgatctcttgggcctccttagaatccgtatcaaacgt  6152500                    --------->TGA2(1)                    <---------TGA2(1) <------NtERF2   ----------->HVH21 --------ANAC46 <-----------HVH21 --------bZIP60(1)  <---------bZIP60(1) ------->bZIP60(1)  --------->bZIP60(1) --------ANAC58 --------->LBD16 ----NtERF2    <---------ANAC58 ---->ALFIN1   <---------ANAC58 -->O2        --------->SPL7                  <------NtERF2 -->TGA1a   <---------RAP2.6(3)             <---------DEAR3(1)                                   ---- ---O2      <-----------HVH21           --------->SPL7                                           ---- ---TGA1a   <---------SPL7            ------>ZmHOX2a(1)                              <-----------GT1 ->MYC3    --------->DEAR3(1)  --------->At4g35610                             <---------YAB1    ---- --------ANAC58--------->ANAC55(2) <------ZmHOX2a(2)             ----------->GT1<---------ICU4  <---- --MYC3 <-----------GT1     --------->At4g35610     --------->ICU4           --------->YAB1     -----   ggcgtcaatttagccgtccgtgacatcagtagcagcgatccttacgtcgtcgtcaagatgggcaaacaggttaatccattcatcattttacaacttcaca  6152600  Previous    Next  AGI:  At3g17970.1    Description:  ATTOC64-III (ARABIDOPSIS THALIANA TRANSLOCON AT THE OUTER MEMBRANE OF CHLOROPLASTS 64-III); binding / carbon-nitrogen ligase, with glutamine as amido-N-donor. similar to ATTOC64-V/MTOM64 (ARABIDOPSIS THALIANA TRANSLOCON AT THE OUTER MEMBRANE OF CHLOROPLASTS 64-V), amidase [Arabidopsis thaliana] (TAIR:AT5G09420.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO68190.1); similar to Toc64 [Pisum sativum] (GB:AAF62870.1); contains InterPro domain Amidase signature enzyme; (InterPro:IPR000120); contains InterPro domain Tetratricopeptide-like helical; (InterPro:IPR011990); contains InterPro domain Tetratricopeptide TPR-1 (InterPro:IPR0 Range:  from: 6147968    to: 6152024    Orientation: Forward Links:  TAIR  MIPS    AGI:  At3g17980.1    Description:  C2 domain-containing protein. similar to C2 domain-containing protein [Arabidopsis thaliana] (TAIR:AT1G48590.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN69475.1); contains InterPro domain C2 calcium-dependent membrane targeting (InterPro:IPR000008); contains InterPro domain C2 calcium/lipid-binding region, CaLB (InterPro:IPR008973) Range:  from: 6152127    to: 6153440    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
	printer-friendly version