Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                     <---------ANAC46                  <------NtERF2                  --------->ATERF1(1)                 ------>NtERF2            ----------->RAV1(1)                 <-----------HVH21       --------->ANAC46                --------->DEAR3(1)--------->ATHB51                <---------ANAC46  --------->AHL20(2)            --------->SPL7        <---------ICU4           ------>MYB46(1)       <---------AHL20(1)           ------>MYB83          --------->AHL20(2)           --------->MYB52(1)    <---------AHL20(2)          --------->MYB55(1)   ------>MYB83        --------->MYB46(3)     ------>MYB46(1)       <---------ANAC58                       ---------      <-----------GT1        <---------MYB59 ------->GAMYB                         ----------->GT1 ----->ZmHOX2a(1)<---------ATERF1(1)   <-----------GT1     <------ZmHOX2a(1)    <---------YAB1 ->ZmHOX2a(1)   <---------DEAR3(1)<---------AHL20(2) <---------ANAC58       <---------GLK1(2)    ----   tcctcgtgtaaccaaacggcgtcgtctataaccaaattatttcacaacagagtttgcttcaggactactacgacgatagattatgatgtaaattcaaaga  6142900         <---------ARR11(3)         --------->ARR11(3)     <---------ZAT18     --------->ZAT14     <---------ZAT14     --------->ZAT18         --------->GLK1(2)    --------->ALFIN1         --------->ARR14(2)  <---------ANAC58          --------->ARR14(2)               --------->ZAT6                        --  <---------ANAC58          <---------GLK1(2)            <---------MYB59                          ---  <---------ANAC46      <---------At4g35610             <---------At4g35610               <---------DAG2 ->DOF2  <---------ARR14(2) <---------ARR14(2)          --------->At4g35610               <----------DOF2 ----->CCA1(2)          --------->At4g35610      <---------ZAT6   --------->REM1(1)      <---------DAG2   gatggagtgcagaccttggtttttgtagcagaatcgtcttcagtttcagtagagtttgagctaactctacatctcattctctgtttctctcccttttcta  6143000                                                          ------>ZmHOX2a(1)                                                      <---------ARR11(1)                                                      --------->GLK1(2)                                                      <---------ARR14(2)         --------->GLK1(2)                            --------->ARR14(2)    <---------YAB1                              --------->ARR14(2)  <---------ICU4                                <---------ARR14(2)  --------->YAB1                               <---------At4g35610      ------->GAMYB   <-----------GT1 --------->ICU4         <---------ARR11(1)     --------->At4g35610     <---------MYB52(2) <---------YAB1         --------->GLK1(2)      <---------ZAT2          --------->MYB46(3) ------->YAB1           ------->TEIL           --------->ZAT2  --------->YAB1   <------ZmHOX2a(1) ------>ICU4           <---------CCA1(2)   --------->ANAC46    <---------ICU4<-----------RAV1(2)   ctgatgatgacaatctatgtccctcgaatctatataagactttcttcgcagctccgaatcctgcatcatcacaacaaacacaggagagttttacaatcgc  6143100                                                                     --------->MYB52(1)                                                                     ------>MYB83                                                                 <------NtERF2                                                                ------>NtERF2                                                              ---------->ID1                                                            <-----------RAV1(1)                                                            --------->MYB52(2)                                                          <---------ANAC58                                                          <---------ANAC58                          <                                                        <---------MYB46(3)                          -            ------>ZmHOX2a(1)                      =====================RAV                         <           --------->TOE1(3)                       ----------->RAV1(2) ------->GAMYB                -           --------->TOE2(3)                      --------->GLK1(2)  -------->P                   ---       <---------GLK1(1)             <---------LBD16   <---------AtMYB61--------->LBD16           <--       --------->GLK1(1)         --------->ATHB12<---------ARR14(2)  ------>MYB46(1)              <-- --------->At4g35610            --------->ICU4   <---------GLK1(2)  --------->MYB52(1)   --------->ANAC58 <---------At4g35610            <---------YAB1   --------->ARR14(2) <---------ALFIN1     --------->ANAC58   ttcagcttgaaatccttaagttttatcgaaaacgattattgggggagaacagaacctgtggtttgtcgcccaaccggaagaagccttacagacgcagaca  6143200                                                                           <---------ANAC46              <---------AtLEC2             --------->ANAC58                <---------ANAC58        <---------GLK1(1)       --------->MYB52(1)                         <---------ANAC58        --------->GLK1(1)      <---------SPL7                           --------->ANAC46     ------>ZmHOX2a(1)    <---------HSFB2a(1)                           --------->ANAC58   ----------->RAV1(2)    --------->HSFC1(2)                            --------->ANAC58 ---------HSFC1(2)        --------->HSFB2a(1)                     ----------->RAV1(1)            ---- -------->HSFB2a(1)       <---------HSFC1(2)                     --------->bZIP60(2)             <--- ---------HSFB2a(1)  <-------TEIL--------->SPL7                  --------->ANAC46              ------ -------->HSFC1(2)  --------->ARR14(1)     --------->ANAC58    --------->RAP2.6(2)            ------- ------>ARR14(2)   --------->ARR11(1) ---------->DOF2       --------->ANAC58           <---------ZAT6 -------GLK1(2)    <---------GLK1(2)--------->At5g28300     --------->ANAC58  <---------MYB46(3)----- -------ARR14(2) ----------->ARR10 ----------->GT1          --------->ANAC46--------->LBD16 ---------   gaacctcctgatttctgcatagattcgaaactccgaacggtaaagaagccatttctgtgtttaagccacaacacaagccgtggttactagtgaaaaaaat  6143300                                                                                           ------->MYC3                                                                                           <-------MYC2                                                                                           ------->MYC2                                                                                           <-------MYC3                                                                                          <---------ANAC46                                                                                          <------NtERF2                                                      <---------AHL20(2)                  <---------ANAC58                                              <---------WOX13(1)       <----------DOF2    <---------ANAC58                                              <--------P     --------->PCF2              ------>NtERF2 ----->YAB1                                  <-------GAMYB   ------>NtERF2              <---------ANAC58 ------ICU4                                 <---------MYB46(3)--------->TCP23           <---------ANAC46 --->AHL20(1)                               <------MYB83 <-----------RAV1(1)            <---------ANAC58 -->YAB1                                    ----------->GT1  <---------TCP15(1) <----------DOF2 ---->ICU4      *TSS<------ZmHOX2a(1)       <------MYB46(1)  <---------PCF5 <---------ANAC58        < >AHL20(2)    <---------TOE2(3)            <---------AtMYB61<---------PCF2  <---------ANAC58       <-   aatgaaacaaaaatttaagggaggacgaagagattacagagatggatggttgatattttttggggcccataggcttttgcttctttagtggcgcgtgttt  6143400                 <---------ANAC58                 <---------ANAC58                 <---------ANAC55(1)             --------->CCA1(2)        ---------->DOF2       <---------WOX13(1)   ------>NtERF2 <---------ANAC46   --------->ORA47(1)       --------->ATHB12   --------->ABI4(1)        --------->ATHB51  --------->DEAR3(1)       <---------YAB1 --------->DEAR3(2)        --------->ICU4                             <-----------GT1 --------->MYB46(3)   --------->ETT(2)  <---------ICU4           <----------DOF2 ---------At5g28300 --------->REM1(2)--------->YAB1        <---------WOX13(1)        <<<<<<<<<<<<<<<< ----------GT1  <-------TEIL<---------ICU4               <---------ICU4       <-------TEIL        <--   ctcaccgcccaaaagacatgcgtgtagacataattgccatcagaattactcaaatacactaattgctctttttttccaagttcatgtgaacaatgggaga  6143500                                                              ----------->GT1                                                             --------->DAG2   ----------->GT1                                                            ---------->DOF2<---------AHL20(2)                                                       --------->AHL20(2) <---------AHL20(1)                                                   ----------->GT1        --------->AHL20(2)                                                 --------->CCA1(2)        --------->AHL20(1)                                                <---------ARR14(2)        <---------AHL20(2)     <---       <---------ZAT14                          --------->ARR11(3)       --------->YAB1   <------MYB46(1)    --------->At4g35610                         <---------ARR11(3)  --------->TOE2(3)     <------MYB83 <LFY  --------->ZAT14 <-----------------AGL1   --------->ARR11(1)  <----------DOF2      --------->MYB59 -----TEIL     <-----------GT1 <----------ID1   --------->ARR14(2)  --------->TOE1(3)  <---------MYB52(1)   ttcattcgctgcacaattcacaatttcacaaatgggccaaatgtttagaagatatgaaaaaataaagtaactttaatataatgtaaacagtttggtttta  6143600                       <---------AHL20(2)                       --------->AHL20(2)                  <---------AHL20(2)                 --------->AHL20(2)                                <----------DOF2              ----------->GT1        <-----------GT1               <---------DAG2         ---------->DOF2         <----------DOF2             --------->DEAR3(1)       --------->LBD16--------->AHL20(2)   --------->ZAT14  --------->DEAR3(2)  --------->At4g35610 ------YAB1  ----------->GT1<-----------GT1<---------ZAT14 ------->TEIL      <---------ATHB12    <---   ttattctcccccaaagagataaaattaaaatcactctttttccagcccagtgaatcaaatgaaccggccctttattcccatcatctaacacctaaaacgt  6143700                                                                     ------->GAMYB                                                                  ----------->RAV1(1)                                                         --------->TOE1(3)                                                         --------->TOE2(3)                                                       ------>MYB83 --------->MYB46(3)                                                       ------>MYB46(1)--------->MYB52(1)            -                                                     --------->MYB46(3)      --------->GLK1(1)      <                                        --------------->AtSPL8 ------->GAMYB <---------HSFB2a(1)   <-                                        <---------------AtSPL3 --------->TOE2(3)                <----                                        <---------------AtSPL8--------->MYB46(3)      ----------->GT1             <---------At4g35610     <---------YAB1 <---------At4g35610      <---------GLK1(1) <----- ----TEIL    --------->At4g35610 <---------ANAC46   --------->At4g35610  ----------->GT1       <-----   ccatctataaactcaagctgaaaactcaaacagcatcgtgtgattgtacttctcaccagccttaaccacaacagacgggaaattcgactggttaatcgcg  6143800  Previous    Next  AGI:  At3g17930.1    Description:  similar to unknown [Populus trichocarpa] (GB:ABK96142.1) Range:  from: 6142135    to: 6143316    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At3g17940.1    Description:  aldose 1-epimerase family protein. similar to aldose 1-epimerase family protein [Arabidopsis thaliana] (TAIR:AT3G47800.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO68210.1); contains InterPro domain Aldose 1-epimerase; (InterPro:IPR008183); contains InterPro domain Glycoside hydrolase-type carbohydrate-binding; (InterPro:IPR011013); contains InterPro domain Aldose-1-epimerase (InterPro:IPR015443); contains InterPro domain Glycoside hydrolase-type carbohydrate-binding, subgroup; (InterPro:IPR014718) Range:  from: 6143525    to: 6145343    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
	printer-friendly version