Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100        --------->CCA1(1) ----------->GT1 -------->ALFIN1 -------ANAC46 -------bZIP60(2)                                                                                   - ------AtMYB61                          ----------->GT1                 XXXXXXXXXXXXXXXXXXXX>MIR1886.1 -----ZAT14               <----------DOF2                              ---------->DOF2       --------   aggtggaaatatccaatttcaaatgtgtctttgaagtctctatggataatttgtcaaaacgatagtatttgataaaagaaatggaatgaaatgaaattag  6136900                                                                            <--------ATHB1                                                                            --------->YAB1                                                                            --------->ATHB12                                                                            <---------ICU4                                                                           <---------YAB1                                                                           <---------ATHB12                                                                           --------->ICU4                                                                       <---------------------WRI1                                                                       ------------>CBF                                                                       <---------ATHB12                                                                       <---------YAB1                                                                  <---------ANAC58                                                                  --------->ANAC58                                                                  --------->ANAC55(2)          ------                                                                  --------->ANAC46           --------                                                                  <---------ANAC58         --------->YAB1             <----------DOF2                                      --------->ANAC55(1)   --------->ANAC58          --------->ARR11(3)                                      <---------ANAC55(2)   <---------ANAC55(2)    --------->ZAT6                                                <---------ANAC55(1)   ----------->GT1   <---------YAB1     --------->ANAC55(2)                         --------->ANAC58      --------->ANAC58 -------->ICU4        <---------ANAC55(2)                         <---------ANAC46      --------->ANAC55(2) ->ICU4   <---------ARR11(3)                                    <-----------GT1   ---------->DOF2  --   tagttatcagtaaatctttttcttacttaattcatcaaatgtttttcatgtgagtgtgttttaaaattacgtaatcaatgattacaaagtaagtaataat  6137000                               --------->YAB1              --------->AHL20(2)              ----------->TBP <---------YAB1            <---------------AGL15      <------------CBF    ----------->GT1 --------->ANAC58        <---------ICU4 --------->ANAC58  ----------->GT1 <---------TOE2(3)              ----------->GT1           --------- --->GLK1(2)----------->TBP --------->YAB1                      <---------ZAT2           <---------GLK1(2) ->ICU4 ----------->GT1 --------->ICU4        <-----------GT1 <-----------RAV1(2)        <----------- -------->DOF2<---------AHL20(2)   <---------YAB1         --------->MYB59             <-----------RAV1(2)   ctaaagcaaattgtatatatatagtaattagtataataagattagatttaacgcatgaattaggccaggtgttaatatcagtcttgtcccagattgttcg  6137100                                                     --------->YAB1                                                    <---------ATHB12                                                   ------>MYB46(1)                                                   ------>MYB83                                     -                                                  --------->WOX13(1)                    <----------DOF2                                  <---------At5g28300<---------ICU4          <---------ARR14(2)     <                                 <-----------GT1 --------->MYB46(3)         --------->WOX13(1)  <---- >KAN4(2)         ------>ZmHOX2a(1)              --------->AtMYB61        ------------>CBF  <-------- -CBF        --------->YAB1  ------>ZmHOX2a(1)  ------------>CBF   <-----------HVH21   <XXXXXXXXXXXXX   ccagagagaatagaatcatcctcgctgtttcctatttaccatttgtttccaccaatcatcatcttctcgcatcagagccaatccatggcgctttctttct  6137200                                                                                  <---------ARR11(3)     --------->LBD16                                                         <------ZmHOX2a(2)    <---------ANAC58                                                       --------->GLK1(1)     ----    <---------ANAC46                                                    --------->LBD16    <---------ARR14(2)    <---------ANAC58                                                  <---------LBD16      --------->GLK1(2) -------->At4g35610                                                --------->DOF5.7(2)     --------->ARR14(2) ---------At4g35610                                    <---------YAB1--------->MYB52(1)    <--------- ------DOF2                --------->ANAC58        <---------GLK1(2) <---------DOF5.7(2)  <---------GLK1(2) --DOF2       <-----------GT1                   ------>ZmHOX2a(1)<---------ICU4   --------->ARR11(3) XXXXXXXMIR390A/B          --------->ANAC58     ====================================HOX2a_HOX2a <----   ttagctccgtgtaatttctctattctgacaagtcaaatccctaaaaactcctcgattctcatggccatcgttaccggagatcgatatctagagaatctcc  6137300       ----------->HVH21                                          --------->ARR14(2)     <---------ANAC58                                             <-----------ARR10           <------     <---------ANAC58     <---------ANAC58                      --------->LBD16               <------    ----------------->AGL1<---------ANAC58                    --------->LBD16                 -------  <---------ARR14(2) <---------ARR14(2)              --------->TOE2(3)                       <-------  --------->ARR14(2) --------->ARR14(2)         ------>ZmHOX2a(1) <---------ARR14(2)      --------->HSFB2a(2) ----->LBD16     <---------At4g35610   --------->DEAR3(2)     <---------LBD16     <---------At4g35610 --ARR10      ---------->DOF2     <---------------AtSPL3    <---------LBD16    <-------TEIL  <------- -----HSFB2a(2)  --------->At4g35610<---------SPL7   --------->YAB1   <---------ZAT14     <---------HSFB2a(2)   agaggttccttgacgagaaagctgatttgcttattgatggtaccgatgtcctcaagcttaatcccgcgggtcttcactatgttcatctccgtctcgaatc  6137400                                                                                                    -                                    --------->WRKY38(1)                                             <                                    --------->WRKY45                                             <---                                    --------->WRKY12                                             <---                                   <---------MYB52(1)                                      --------->ARR14(2)                                  <-------GAMYB              ------>NtERF2                 <---------ARR14(2)                            <---------ZAT2                   ----------->RAV1(1)          <---------ZAT2                            --------->ZAT2                  <---------ETT(1)              <---------At4g35610                            --------->At4g35610             --------->ANAC46              --------->At4g35610                            <---------GLK1(1)               ----------->HVH21          <---------At4g35610    <---------ZAT18         --------->GLK1(1)         --------->ANAC46         <---------ZAT18   <--- <---------ANAC46           <---------At4g35610       --------->TGA1a        --------->LBD16   ------ ---ARR11(1)                --------->HSFC1(2) --------->LBD16              --------->ANAC55(2)------ -----ARR10              --------->LBD16      <---------ANAC58              <---------ANAC58  <------ >TEIL                  --------->ANAC46      <---------ANAC58              <---------ANAC58 <------- --CCA1(2)             <---------LBD16>>>>>>>>>WRKY6  --------->O2      <---------GLK1(1) --------->ZAT2 --GLK1(2)  <---------At4g35610   ==============================MYC_MYB --------->GLK1(1)----------->ARR10   tcttcgtgaacttgagcttatgctctccggagctcccgttgactatctccgtgcctacgtctccgacattggcgatttccgtgcccttgagcagctccgg  6137500                                                                    ------>NtERF2                                                                    <---------At4g35610                                                                    --------->At4g35610                                                                 ------>NtERF2   <-----------GT1                                              --------->ANAC58 -------->ARR14(2)                                              --------->ANAC58 ---------ARR14(2)                                              --------->ANAC46 ------ANAC58                                                 ------>ZmHOX2a(1) ------ANAC46                                                --------->TOE2(2)                     -- ------ANAC58                                               ------>ZmHOX2a(2)                -------- --->LBD16                                                <---------ARR11(3)                --------- >NtERF2                                         --------->DEAR3(1)--------->DEAR3(1)      <---------TOE1(3) ---DEAR3(1)             <---------TOE2(3)  <-----------HVH21--------->TOE1(2)     <---------DAG2<--- --LBD16     ------>ZmHOX2a(1)<---------DEAR3(2)<---------LBD16--------->SPL7      <----------DOF2 <-   cgtattctccgtctccttccttctcttaaggtcgtttcatcgcttccttcaccggctcgtgatcctacgccgctctctcttcttcctttttctaagctta  6137600                                                                                         <---------ICU4            --------->LBD16                                                             --------->ICU4           <---------ANAC58                                                      <---------At4g35610       <---------GLK1(1)                           <---------HSFB2a(2)           --------->At4g35610       --------->GLK1(1)                           --------->HSFB2a(2)          <---------ARR14(2) ------->ARR11(3)                              <---------WOX13(1)           <---------At4g35610 ->TOE1(3) <---------ANAC58              --------->MYB52(1)                 --------->At4g35610 >At4g35610<---------ANAC46           --------->At4g35610                  --------->GLK1(2)>>>>>>>>> ------TOE1(3)  <---------ANAC46      <---------At4g35610       <---------ALFIN1--------->ARR14(2) --------ARR11(3)                  <---------At4g35610<<<<<<<ZML2  <----------DOF2------>ZmHOX2a(2) <   aggtcttggaactccgtggctgtgatttgtctacttcttctgctaagggattgctagaactcaggcacactttggagaagctgatctgccataattccac  6137700                                                  --------->ARR14(2)           <---------DAG2                         <---------ARR14(2)    <-------GAMYB           <----------DOF2                       <---------GLK1(1)     ----------->GT1    <----------DOF2    <----------DOF2                             <----------DOF2     --------->ALFIN1     <---------ANAC58  --------->At4g35610                         --------->ZAT18     <---------ANAC58       <---------ANAC58  <---------At4g35610                         <---------ZAT18     <---------ANAC46  --------->ALFIN1 >>>>>>>>LFY                               <---------ANAC46       <---------ANAC58  <-----------RAV1(1) ---------ZAT18       <----------DOF2<---------AtMYB61           --------->ATHB12 <---------ANAC46<--   tgtgagctttccacttttccctctctttttttgtttgttttggtttagtgcatttctgctatagcattgagtggggttatagttctgtgttgctttagtc  6137800  Previous    Next  AGI:  At3g17920.1    Description:  protein binding. similar to leucine-rich repeat family protein [Arabidopsis thaliana] (TAIR:AT1G48540.1); similar to leucine-rich repeat family protein [Arabidopsis thaliana] (TAIR:AT1G48540.2); similar to unnamed protein product [Vitis vinifera] (GB:CAO68222.1); contains InterPro domain Leucine-rich repeat; (InterPro:IPR001611) Range:  from: 6137261    to: 6142029    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
	printer-friendly version