Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                      <---------ZAT14                  --------->ARR14(2)                    --------->ZAT14                  <---------ARR14(2)                 --------->LBD16                    <---------GLK1(1)                --------->HSFB2a(2)             --------->ANAC58          <-------TEIL                --------->ANAC46                          --------->MYB46(3)         --------->CCA1(2)        --------->CCA1(2) --------->GLK1(1)          --------->ANAC46  <---      <---------TOE1(2)<-----------HVH21        --------->ANAC58  <-----------GT1         <----------DOF2   <---------ANAC46 <---------ZAT18   --------->ANAC58    <---------LBD16    <-----------GT1    <---- ----->HVH21    <---------HSFB2a(2)   --------->ANAC58   ------>ZmHOX2a(1)<----------DOF2 <---------DAG2   acaggtcgtagatacattccagagcagtcactgaagataaacgcaacttcaagcatttcctctgggattttctagtcttttacccaatgccacttttgcc  6133100                                                                                    ----------->GT1                                                                                  <-------GAMYB                                                                               <---------ANAC58                                                    --------->At4g35610        <---------ANAC58   <----------DOF2                                  --------->GLK1(1)          <---------ANAC46 -------DOF2                      <---------ZAT14 <---------GLK1(2)        <---------GLK1(2) -----DAG2                        --------->ZAT14<---------At4g35610     <---------ATHB12   tttttctttagagccaagaagagtcatcaaacacagagcagttctatcttcagcatctccatagagactcatccaaagattgtgtgttgaaaaatcgatt  6133200                                                   <---------At4g35610                                              --------->TGA1a                                              <---------TGA1a                                              ======================================bZIP_DOF                                              --------->O2                         <---------DAG2                               <---------MYB46(3)  --------->At4g35610             <----------DOF2                           --------->DAG2     ======================================bZIP_DOF                          ---------->DOF2     <---------O2                        <---------ANAC58                          ==============================bZIP_DOF                  <---------ANAC58 <-                --------->HSFB2a(1)         <---------ALFIN1                  <---------ANAC58  <----                <---------HSFB2a(1)      --------->ANAC58           <---------ANAC58         <-------               <---------TOE1(3)         --------->ANAC58           <---------ANAC58        <--------               <---------TOE2(2)         --------->ANAC46    ------->MYC3     <---------ANAC58-------               <---------TOE1(2)       <-----------GT1       <-------MYC3<----------DOF2 <---------YAB1   ttggtttccatgtttcgaaggtttgaagaaaagttgttgtaataccccacttgtgctgaaccatgtgtttgcgttctttagcttgctttttgtaattgat  6133300                                      <---------YAB1                                --------->MYB46(3)                                <---------ATHB12                           --------->ANAC55(1)                           --------->ANAC58                          <---------AHL20(2) --------GLK1(2)           <---------ANAC55(2)                      --------->AHL20(2) -----WOX13(1)             --------->ANAC58                    <---------ANAC58 --AHL20(2)                --------->ANAC46                    <---------ANAC46 -WOX13(1)            <---------At4g35610                 --------->MYB52(2)               <--------- -->ATHB12            --------->At4g35610       <-----------GT1<---------ANAC58   <-----------GT1   tgattctgaaattcgcatagagacagaagacgcaaccattgttatcgaatttacatttgttatttgcttataaaatcagataattaaccaaaacttttct  6133400                                                    --------->At4g35610                                                --------->DEAR3(1)                                            --------->ZAT14                                            <---------ABI4(2)                                            <-------TEIL                                            <---------ZAT14                                         <---------ANAC58                                         <------MYB46(1)                                         <---------ANAC46                                         <---------ANAC58                                         <------MYB83 <----------DOF2                                         --------->At4g35610                                        --------->MYB111(2)    <---------ALFIN1                                        --------->MYB46(2)    --------->ZAT18                                        --------->MYB111(1)   <---------ZAT14                                   --------->DAG2   <---------At4g35610  <-----------RAV1(2)  -------                                  ---------->DOF2--------->LBD16------->TEIL                  -------                             <------ZmHOX2a(1) <---------LBD16--------->ZAT14         --------->AGP1-                            <----------ID1  --------->ZAT18   <---------ZAT18        --------->At4g35610 --------->MYB46(3)     <---------ATHB12--------->MYB59   <-----------RAV1(1)    --------->MYB52(1) - -DOF2              --------->MYB46(3)  --------->MYB52(2)===========================RAV      <------   tcaacaaatccaagtatggctaacaaatgaaggacaaaaagttaggtgcaccggagcttaatggtgcacccgaatgcaggggataacagctctacaaatc  6133500               <---------ATERF1(1)                              --------->GLK1(2)              ----------->HVH21                                 <---------ARR14(3)          <---------LBD16                                       --------->ARR11(3)          <---------At5g28300<---------ANAC46              <------ZmHOX2a(2) -->ARR14(2)  --------->WRKY38(1)                      --------->LBD16                  ------>NtERF2 -->GLK1(2)  <-----------HVH21 --------->ALFIN1       <---------LBD16       --------->CCA1(2)   <---- -------->ANAC58            <------NtERF2     <----------DOF2   <---------ARR11(3)     <---------ETT(2) -------->ANAC58     ---------->DOF2<------NtERF2    <---------LBD16 <---------LBD16   --------->ETT(2) ---ARR14(2) --------->At5g28300  *TSS        <---------DAG2    --------->ARR14(3)     <---------RAP2.6(2)   tgaagccattttcacggtgaccccaaagtcgtcgtggaggcaaaaaccctttacctccgggatcaaaatcttggggagagacgaagatggcgacctcgct  6133600                                               --------->REM1(1)                                             --------------->AGL15                                             <---------------AGL15                     --------->ZAT6   --------->ZAT18                ------>ZmHOX2a(1)         --------->MYB52(1)    --------->CCA1(2)             ------>NtERF2        ===============HOX2a_HOX2a    <---------ZAT18  --------->ARR11(3)                     -------        ------>ZmHOX2a(1)      --------->GLK1(2)       <-----------ARR10                      -------    <---------ARR11(3)        --------->ARR11(3)    <---------ANAC55(2) <----------DOF2    --------->WRKY18(1) ------DOF2     <------ZmHOX2a(2) <-----------RAV1(1)  <---------ARR11(3)            --------->GLK1(2)   ttccaaaatcctaacgagatcgaacactaagagatactggtgctctactacaacaagtatctctgcctctccttctttaccgaaacaattctggtcaaga  6133700               ------>NtERF2              --------->WRKY12              ----------->HVH21              --------->WRKY38(1)            --------->At4g35610            <---------At4g35610         ------>NtERF2         <---------RAP2.6(3)           ------>NtERF2         <-----------HVH21            --------->DEAR3(1)        <---------O2                 --------->RAP2.3(1)        --------->bZIP60(1)         <---------ATERF1(1)        --------->ATERF1(2)         --------->LBD16                                       ------->MYC3        <---------ANAC58            ------>NtERF2                                         ------->MYC2        --------->DEAR3(1)         --------->DEAR3(1)                    --------->AtMYB61<-------PIF5        <---------ATERF1(2)        <---------ALFIN1                     --------->ANAC46  <-------MYC2        <---------ANAC58           --------->ANAC46            <---------At4g35610        <-------MYC3      ------>NtERF2               <---------LBD16          --------->ARR11(3)             ------->PIF5 <---------ZAT14               <---------ZAT2              <---------ARR11(3)     <-----------RAV1(1) --------->ZAT14           ------>ZmHOX2a(1)          <---------ATHB12<---------ALFIN1 <---------ANAC58 -->ANAC58 <---------DEAR3(1)  --------->ZAT2   --------->ANAC58  <---------At4g35610  <---------ANAC58 -->ANAC58<------NtERF2 ------>ZmHOX2a(1)       --------->ANAC58  --------->At4g35610  <---------ANAC46   cacttctctgccgtcgctgactcttcctcctctagctccgccgctcttggaagccaatcgagttcttctgctccacctcaaggtatgttgctcgtgctat  6133800                                  --------->ANAC58                                  --------->ANAC58                            <---------ARR14(2)                     --------->At4g35610                     <---------At4g35610                     <---------DAG2                   -------                    --------->GLK1(2)                        <----------DOF2   --------->MYB52(1)                   <---------GLK1(2)                    --------->ANAC58      --------->TOE1(2)        <---------ANAC58   <------ZmHOX2a(1)            --------->ANAC58     <---------MYB52(2)        <---------ANAC58 <---------TOE2(3)       ---------->DOF2             --------->MYB46(3)    <-   gtcttccaatgcttgagcttggaatctgaggatagtaagcatcaatttctgaaaagctaagccctttttgtttcagagaacaaacgagggtctaagtggt  6133900                                                                      ---------->DOF2                                                             <------ZmHOX2a(1)                                                            <---------At4g35610                                                          <-----------RAV1(2)                                                        <-----------HVH21                                                       =============HOX2a_HOX2a                                                       ------>ZmHOX2a(2)                  <---------LBD16                      ====================HOX2a_HOX2a                 <---------ANAC58                     <------ZmHOX2a(2)                 <---------ANAC46                     =====================HOX2a_HOX2a                 <---------ANAC58                    --------->ARR11(3)                 ----------->RAV1(2)                 <---------ARR14(2)                 <---------AtLEC2                    <---------ARR11(3)   <-----------HVH21   <-----------RAV1(1)                      --------->WRKY18(1)     <------ZmHOX2a(1)   ==========================RAV           <-----------HVH21--------->At4g35610 ---->GT1    <---------ANAC58          <---------LBD16==============HOX2a_HOX2a --------YAB1<---------ANAC58     <---------AtMYB61  --------->ARR14(2) --------->DAG2   <---------ATHB12   cacaattgttgttgttcttgcctggagcgattacctttggtctcgggtcatggcagatcgtcaggagagaggaaaaggtcagtacttcgaaatcaatgga  6134000  Previous    Next  AGI:  At3g17900.1    Description:  similar to unnamed protein product [Vitis vinifera] (GB:CAO70781.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO41033.1) Range:  from: 6128512    to: 6133389    Orientation: Forward Links:  TAIR  MIPS    AGI:  At3g17910.1    Description:  SURF1 (SURFEIT 1). similar to cytochrome c oxidase assembly protein surfeit-related [Arabidopsis thaliana] (TAIR:AT1G48510.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO68221.1); contains InterPro domain Surfeit locus 1 (InterPro:IPR002994) Range:  from: 6133534    to: 6136377    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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