Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                           <------------MYB.PH3(2)                                         <---------MYB46(2)                                         <---------MYB59                                    --------->TOE2(3)                                    --------->TOE1(3)                                    <----------DOF2                                  ------>NtERF2                               --------->ZAT2                               --------->At4g35610                              --------->ALFIN1                            <---------ANAC58                            <---------TGA1a                            <---------O2 <---------MYB52(2)                            --------->bZIP60(1)                            --------->TGA1a                            <---------ANAC58                            <---------bZIP60(2)                            ==========================MYC_MYB                            ===================bZIP_DOF                            ===================bZIP_DOF                            <---------bZIP60(1)                            <---------ANAC55(1)        ==============================bZIP_DOF        <----------DOF2     <---------ANAC55(2)             ---------->DOF2        <---------DAG2      <---------ANAC46       --------->YAB1     <---------ALFIN1       --------->ANAC55(2)   <---------ATHB12 -------->ANAC58           <-----------------------TaNAC69(2)                  <---------ARR11(3) -------->ANAC58         ----------->HVH21      --------->WOX13(1)             --------->ARR11(3) ------->DOF2   <xxxxxxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)  --------->TOE2(3)---------->DOF2 ----------   gaaagcaccactttttcaagcgcatcagtgacgtgctgccttaactaactcaatcacaaacctaaagataaaaacttcaaagagcttaagaatcaaagac  6128100                                                                                <-------MYC3                                    -------->ATHB1                              ------->MYC3                                    --------->ATHB51                         <---------ALFIN1                                    --------->ATHB12                         --------------->AGL15                                   --------->ICU4                            ========================                                   <---------YAB1                       --------->RAP2.6(3)                                 <---------------AGL15   <---------ANAC58    ----------->RAV1(1)                          <---------YAB1         --------->ALFIN1       <-----------------------TaNAC69(2)                  ----------->RAV1(1)   <---------MYB46(3)            ----------->HVH21             --------->KAN4(2)   --------------->AGL15   <---------ANAC58<---------ANAC46            <----------TaMYB80  <-----------------AGL2   <---------ANAC46<---------RAP2.6(2)            <---------KAN4(1)   ===================================================================== >DOF2      --------->KAN4(1)   <-----------------AGL3  <---------MYB46(3)------>NtERF2    --------->TOE2(3)   actgactaacttgaatattcccacagttacgatggctattattggttaagagtggggatgggtgtatatatagtgacggccacatgtagaaaaccctagt  6128200                                         <---------ANAC58                                         <---------ANAC58                                --------------->AGL15                                <----------DOF2                                <---------------AGL15                               --------->TOE2(3) --------->YAB1              --------->At4g35610 --------->ATHB12         --------->MYB52(1)    --------------->AGL15   --------->ANAC58           <-----------------AGL3   <---------ANAC55(2)        <-----------------AGL2   --------->ANAC55(2)        <-----------------AGL1   --------->ANAC58           ----------------->AGL1<---------AHL20(2)  <---------LBD16     ----------->GT1    <---------ANAC46                                       ----- ===============================================MADS_MADS                            <---------MYB46(3) ===============================================MADS_MADS                         --------->MYB52(2)   tgatcacggactaatgggctgagtttgttatttcctttattgggcttgtaagaataaatcacttggtcttagtagtttgtaagttagtggttacctccac  6128300                 <-----------RAV1(1)       <---------YAB1      --------->ARR11(3)                                                                          ---      <---------ARR11(3)            ------->TEIL                                                  <--      <-----------ARR10          <---------YAB1                                               -------      <---------ARR14(2)    <----------DOF2                         ----------->GT1           <------     --------->RVE1(1)      --------->TOE2(3)                ----------->GT1                  -------    ------->TEIL--------->ICU4  <---------TOE2(3)           --------->ANAC58                 <------- ---->ANAC46 <---------YAB1 --------->TOE1(3)               --------->ANAC58            --------->GLK1(2)   taaatgaatatctttgtaattgttggctaactttaatgaatgtgaagcatgcttaagaaaacaaggcaaaatgtaaaatgagaagaagagaatcaataaa  6128400                                                                                      <---------AHL20(2)                                                                                      <---------AHL20(1)    <---------At5g28300                                                               --------->AHL20(1)    <-----------GT1                                                                   --------->AHL20(2)   <-----------GT1                                                            ----------->GT1 ------>ARR11(3)       --------->YAB1                                        <---------TOE2(3) -------ARR11(3)  <---------ATHB12                                         <---------AHL20(2) -->YAB1        --------->WOX13(1)                                        <---------AHL20(2)       <- ---ICU4      ------------>CBF                                      --------->YAB1   <---------AHL20(2) --->DOF2     <---------ATHB12            <---------AHL20(2)      ----------->RAV1(1)--------->AHL20(2) --ATHB12  ------>ZmHOX2a(1)           ------->TEIL        ----------->HVH21---------->DOF2    ------   gacatttaccctcctaatcaatctttcataaactgtatatgaattttttttagggggttttctgaccccaacataatttaaagtaaaataaatttgatca  6128500                     --------------------->WRI1                  --------->AHL20(2)           <---------ANAC46               --------->ATHB51             <-----------GT1               <--------HAHB4               <---------ARR14(2)               --------->YAB1            --------->ALFIN1               <---------ICU4           ----------------------->TaNAC69(2)            *TSS  <---------AHL20(2)  <---------AtMYB61           <------ZmHOX2a(1)         <------NtERF2--------->WRKY12         <---------TOE1(3)          --------->LBD16                                          -------- --------YAB1 --------->ICU4       --------->DEAR3(1)         <---------ALFIN1      ----------->HVH21 --->YAB1<---------TOE2(3)        <---------LBD16<---------MYB52(1)             <---------CCA1(2)   tatgaaagtttaaggaataattaaacaggttgtatcgccggaggtgtttccgtttacctctctcacacctatttctcttcttctatctgacattcgaaag  6128600                                                                          <---------At4g35610                                                                  <---------ARR14(2)                                                                  --------->ARR14(2)                                                                 <---------CCA1(2)                                                               <---------------AGL15                                                               --------------->AGL15                                                              --------->TOE2(3)                                                              <-----------------AGL2                                   <---------ALFIN1           <---------MYB59                         <---------ZAT18                      <-----------------AGL3                         --------->ZAT18                    -------->P    --------->At4g35610                      <---------At5g28300                   ------>MYB46(1)--------->ATERF1(1)                     <-----------GT1    <-----------RAV1(1) ------>MYB83<--------P              ----- -->DOF2        <----------DOF2    <-----------------AGL1  ------>ZmHOX2a(1)              <------ZmHOX2a(2)   ctctctctctctatctctcttttttaccgcgcttgctacacattgtggcagacatcaactcctacctaaatctggtagcagcccattttcagatcgaatt  6128700                                                                               <---------ANAC46                                                                               <---------ANAC58                                                                            <---------MYB52(1)                       --------->YAB1                                 --------->ARR14(2)          <------ZmHOX2a(2)                 <---------ARR14(2)     <---------ANAC58         --------->ARR11(3)           <---------At4g35610  <----------DOF2 <-------GAMYB         <---------ARR11(3)          --------->MYB59 <----------DOF2  <---------ARR14(2)        --------->GLK1(1)  --------->GLK1(2)--------->ARR14(2)     <---------ANAC58        <---------GLK1(1) <---------GLK1(2)<---------CCA1(2)<-----------HVH21  <---------ANAC58 ---->WRKY38(1) <-----------RAV1(2)--------------------->WRI1  <---------At5g28300   gaccccaaggagatcacatcaggtataagaatctcaagttagctcgtatcgtcttctttagctttcactgcgtttcccgttgcttaaacatgttcaattt  6128800                                                                           <---------ANAC55(2)                                                                           --------->ANAC55(2)                                                                         ------------->DYT1                                                                         <---------ZAT14                              <---------MYB52(1)                         --------->ZAT14                      ------>ZmHOX2a(2)                                 --------->WRKY18(1)                ------>ZmHOX2a(2)                                      <-----------HVH21        -----               --------->At4g35610--------->YAB1---------->ID1      ------>ZmHOX2a(2)          <-----              --------->ARR11(3) <---------YAB1 <-----------GT1    <------ZmHOX2a(2)           ------  <---------AHL20(2)--------->ARR14(2)         <-----------GT1    <---------ARR14(2)         -------- --------->AHL20(2) <---------ARR14(2)    <---------MYB52(1)      --------->ARR14(2)        ---------   cgatttattcgagtgtgatctggatcggcttcgttatcattttcgtttttttcccttctctgagtttggatccagtcaagtgatttagatgcgataaagc  6128900                                       --------------->AGL15                                     <---                                       <---------------AGL15                                     <---                                 <---------ICU4                                              <-------   <---------MYB46(3)          <---------YAB1                                                <------- ---->TOE1(2)                >>>>>>>>>GT-1       <----------DOF2                           --------->ARR11(3) ----ZAT2                 ----------->GT1<---------YAB1                            ================== --->ZAT2         <------ZmHOX2a(2)   <-----------------AGL2                       <------ZmHOX2a(1) ->DAG2          --------->ARR11(3)   <-----------------AGL3                     <---------TOE2(3)  - ->DOF2          <---------ARR11(3) <-----------GT1                    <---------LBD16   ------->TEIL   tgggattgttgagagagaagatcaattctggttaatattgactatatttggctcttctgtgatttgcagtttttgggggttttgaggaatgaatttcttg  6129000  Previous    Next  AGI:  At3g17900.1    Description:  similar to unnamed protein product [Vitis vinifera] (GB:CAO70781.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO41033.1) Range:  from: 6128512    to: 6133389    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
	printer-friendly version