Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                                  -----                                                                                              -------                                                                                              -------                                                                                              -------                                                                                           <-------TEIL                                                                                         ------->PIF5                                      <---------AHL20(2)                                 <-------MYC3                                     --------->AHL20(1)                                  ------->MYC4                                     <---------ARR11(3)                                  ------->MYC3                                     --------->AHL20(2)                                  <-------MYC2                                     <---------AHL20(2)                                  ------->MYC2                                  --------->AHL20(2)        <-------MYC3                 <-------PIF5                                 <---------AHL20(2)         ------->MYC2                <---------ANAC58           --------->AHL20(2)    --------->AHL20(2)         <-------MYC2               ------------>OsbHLH66       --------->AHL20(2)       --------->AHL20(2)--------->AHL20(2)   <---------CCA1(2)<---------ANAC58 ----->WOX13(1)<---------------AtSPL8<---------AHL20(1)     ------->MYC3--------->ARR11(3) --------->ZAT18 ---->AHL20(2) --------------->AtSPL8--------->ARR11(3)    <---------ANAC46    --------->WRKY18(1)   aatcaaagattaaaaatatagtactaaaatacaaattaatatattttgccaaaaaaatgcaacgtgcaaatgtttatcttggtcaagagaacgtgcacga  6119400                                                                                    ------>NtERF2                                                                                    <---------RAP2.6(3)                                                                                   --------->RAP2.6(2)                                                                                   --------->DEAR3(1)                                                                                   <---------ETT(1)                                                                                   ------->GAMYB                                                                                   --------->At1g77200                                                                                   --------->DREB2C(2)                                                                                  --------->DEAR3(2)                                                                          <---------ANAC58                                                                          <---------ANAC58                                                                       ---------->CDC5       --------                                                                     --------->ANAC46       ---------                                                                   --------->REM1(1)----------->RAV1(1)                                                 ----------->GT1   <---------ALFIN1--------->RAP2.3(3)                                             --------->DAG2       <---------ZAT14--------->At4g35610   ----------->GT1                <-----------HVH21           --------->ANAC58   --------->ZAT2   <---------ZAT6                 --------->At5g28300         --------->ANAC58   <---------At4g35610 ----->DOF2                     <---------DEAR3(1) <--------P --------->ANAC46 =================RAV -->ANAC58               <<<<<<<<<RAP2.2    --------->DAG2  --------->ANAC58   <-----------RAV1(2) <- -->ANAC46              <---------TOE2(3)  ---------->DOF2  --------->ANAC58 <-----------HVH21     -- -->ANAC58     <-----------GT1 <---------At4g35610<-------GAMYB   --------->ZAT14<---------ZAT2 -----   aagtagtgtaactaattttactattttagattgagcggtgagacaaaaagggggttagactcacgcgctacacttagcgcgtcagccgacaaaaaaaagt  6119500                                                                                   --------->ANAC58                                                                                   <---------TGA1a                                                                                   ==================                                                                                   --------->TGA1a                                                                                   <---------O2                                                                                   --------->ANAC46                                                                                   --------->ANAC58                                                                                  ------>NtERF2                                                                                 <---------ALFIN1                                                                               <-----------------PIF3(1)                                                                              --------->ANAC58                                                                        ------->MYC3                                                                        <-------PIF4                                                                        <-------MYC3                                                                        ------->PIF4                                                                        <-------PIF5                                                                        ------->MYC4                                                                        <-------MYC2                                                                        ------->PIF5                                                                        ------->MYC2<-------MYC3                                                                       ======================bZIP_bZIP                                                                       <---------TGA1a       <-------                                                                       --------->TGA1a       --------                      --------->AHL20(2)                              ------------>OsbHLH66 ---------                  <---------AHL20(1)                                --------->ZAT18--------->O2                  <---------AHL20(2)                     --------->TOE2(3)    --------->ANAC46                 <---------AHL20(2)                      --------->TOE1(3)------->TEIL<-----------HVH21 <---------YAB1  --------->AHL20(2)                     --------->ANAC46<-------MYC4------->MYC3 ->DAG2      <---------AHL20(2)                         ----------->GT1============================== ->DOF2   --------->AHL20(2)    ------>NtERF2    <---------ATHB12   <---------ZAT18<---------ALFIN1 --------bZIP60(1)--------->AHL20(1)       ----------->GT1   <---------YAB1   --------->ANAC58    === ------->bZIP60(1)--------->AHL20(2)       <---------ANAC46 --------->AHL20(2)--------->bZIP60(2) --- ---->ALFIN1 --------->AHL20(2) <---------At4g35610--------->WOX13(1)<------------OsbHLH66  ---------   gttgtcattgaataaaaaaataaattaaaactgccgcttcgcatctcgtgaatcattcacgttaaaatagcgcacgtgcctcgccacgcgtctcaccaca  6119600                                                                  --------->LBD16                                                                 <---------LBD16                                                                <---------LBD16                                                              --------->ARR14(2)                                                           --------->ANAC58                                                           <---------ANAC46                                                           --------->TGA2(1)                                                           --------->bZIP60(1)                                                           <---------TGA2(1)                                                           --------->O2                                                           <---------TGA1a                                                           <---------O2                                       <-----------GT1     <---------ANAC58                              <-------PIF4                 <---------bZIP60(1)                              ------->MYC4                 --------->ANAC55(2)                              <-------PIF5                 <---------ANAC55(2)                              ------->MYC2                 --------->ANAC58                              <-------MYC4                 <---------bZIP60(2)                              ------->MYC3                 <---------ANAC58                              ------->PIF4 ------->GAMYB  ----------->STF1            --------->ANAC46  <-------MYC3 ==========================MYC_MYB            <---------ALFIN1  <-------MYC2--------->MYB46(3)  <---------ARR14(2)          <---------ALFIN1   <---------TGA1a            ----------->TGA1        ----------->RAV1(1)  --------->TGA1a ------>MYB83<---------TGA2(2)     --------->ANAC58        =================bZIP_DOF  ----------->HVH21     --------->ANAC58        ======================MYC_MYB<-----------------------TaNAC69(2)     --------->ANAC46       ------------>OsbHLH66     --------->At4g35610 ========bZIP_DOF           ------->TEIL<-----------GT1<-----------HVH21 --------AGL15             <------------OsbHLH66      --------->LBD16 ------->AGL15  --------->ZAT14    <----------DOF2  <---------LBD16                                 < -------->AGL3  <---------ZAT14   <---------DAG2  --------->ARR14(2)                       ------>NtERF2 ========bZIP_DOF  --------->ANAC46==================================bZIP_DOF  <---------ZAT2       - ======================================bZIP_DOF   <---------ARR14(2)     ----------->RAV1(2)--------- ------->DOF2   <---------ZAT18 ------->TEIL ------>MYB46(1)  --------->MYB52(1)          --------->ANAC46 -------->AGL2--------->ANAC46------->PIF5--------->DEAR3(2) ----------->HVH21 <---------At4g35610 <-   aaaagaaacgccacacactgcacgacgatgcacgtgcctttttaaccgactatatccggtgacgtaaccgggacaacctgtagctggtttttgcgccaat  6119700                              <---------YAB1                           --------------->AGL15               --------->ARR11(3)              <---------------AtSPL3               <---------ARR11(3)           <---------AHL20(2)                                    ---               --------->GLK1(2)        --------->AHL20(2)                                       ----              <---------GLK1(2)   ----------->GT1        <-----------GT1                         ---- <---------GLK1(1)         <---------------AGL15   --------->SPL7                               <---- --------->CCA1(2)         ======================================================================MADS_MADS ---------ARR14(2)        <---------ANAC58 --------->AHL20(2)              ----------->GT1     <----- -------->ARR14(2)      <-----------GT1 <---------AHL20(2)    <-----------HVH21   <---------AHL20(2) --->CBF  ---------->DOF2 <---------ANAC58 <---------AHL20(2)<-----------RAV1(1)  --------->AHL20(2) -----ZmHOX2a(1)  <----------DOF2<---------YAB1<---------------AtSPL8    *TSS    <---------------AGL15   aggatatgagaaaaaagaatcttttttttcttgttatagttataaattaatggtacgattcacatgtcgcatgcgatttgttaataaaactagaaattgc  6119800                                                                  ------>NtERF2                                                                  --------->LBD16                                                                 <---------LBD16              <------                                                                <---------LBD16             ---------     <-----------GT1                                       <----------DOF2                  ------>NtERF2 ------>At5g28300                                          <---------DAG2                  <---------LBD16 ----->LBD16                                            ---------->ID1                     <---------RAP2.6(2) ------->GT1           <-----------GT1                  <-----------GT1                   <---------LBD16 -----ANAC46      <-------MYC3                   <---------MYB52(1)                <---------ANAC58 ----LBD16        ------->MYC3         ---------->DOF2 <-----------GT1             <---------ANAC58<-   ggtgaattaacttcattccacgttttttcattttctccctcaaaagtctctgttttttttcctttttccggcgaagctctatttagcttgattccggcgt  6119900                                                                                              <------                                                                                              <------MYB83                                                                                              <------                                                                                              <------MYB46(1)                                                                                             --------                                                     <---------DEAR3(1)                      <-------     <<<<<<<<CAMTA3                                ------>NtERF2                             <------MYB83   --------->ANAC58                               --------->ZAT18                            <------MYB46(1)   --------->ANAC46                              <---------ANAC58                          <--------P   --------->ANAC58                              <---------ANAC46                      <---------LBD16   --------->ANAC55(2)                          <---------At4g35610                   <---------LBD16   <---------ANAC55(2)                 <---------AHL20(2)       <---------YAB1  --------->ARR11(3) ---ANAC46                            --------->AHL20(2)     --------->ICU4     <---------ARR11(3) >LBD16                               <---------AHL20(2)    <----------DOF2     <---------GLK1(2) ----------GT1                  <------ZmHOX2a(2)<---------ANAC58--------->YAB1<---------RVE1(1)  ---   ttaacacgcgttttaatcgaaacagacatttgagatcgaattaattttgtagcgggctgtgtctttattatagatggagagagattttctcgggttgggt  6120000                                                             <---------ICU4                                                             <---------AHL20(2)                                                            --------->AHL20(2)                                         --------->ARR11(3) <---------AHL20(2)    <---------GLK1(2)           --------->TOE1(2)    <---------TOE1(3) ---ANAC58                      --------->TOE2(2)    <---------TOE2(3)                            <-- ---ANAC58                 <------ZmHOX2a(1)       <-------TEIL <-----------GT1            <---------WOX13(1) ->MYB59          <-----------HVH21  ---------->DOF2<-----------RAV1(2)                 <---------YAB1 --MYB46(3)  <------ZmHOX2a(2) --------->MYB46(3) --------->GLK1(2)                 <---------GLK1(2) -------->GT1=====================HOX2a_HOX2a     --------->CCA1(2)               <---------YAB1  ---   tcgaaaaattctccgatcactgtcaaggaggaaaccagcgaaagctctagagattcaggttatttattactcttctcaatttttctgattctgattgttt  6120100                                                                                            ---------                                                                                            <--------                                                                                         <---------HSFB2a(2)                                                                                       <---------LBD16                                                                                      <---------ANAC58                                                                                      <---------ANAC58                                                                                  <---------ANAC58                    --------->ATHB12                                              <---------ANAC46        <---------ARR14(2)                                                        <---------ANAC58      <---------TOE1(2)      --------->ICU4                                 <---------AHL20(2)      <---------TOE2(2)   <------ZmHOX2a(1)                          <---------At4g35610 --------->HSFB2a(2) -------AHL20(2)  <---------WOX13(1)                                 --------->At4g35610<---------LBD16 ------>AHL20(2)--------->ATHB12    <------ZmHOX2a(1)              <---------GLK1(1) <---------ZAT2   ttaaatcgtagatttgtttgattgattaggagttattaggactacttgtagtatggaatttgtttttggatagctgattttatggcttgctcgggaactg  6120200                    <---------At4g35610                    --------->At4g35610              <---------ANAC58                 --------->LBD16              <---------ANAC46               <---------LBD16              <---------ANAC58              <---------LBD16         <-----------RAV1(1)           <---------DAG2         --------->MYB52(2)            <----------DOF2              ----------->GT1         <---------MYB46(3)           <---------ANAC58          --------->ARR14(2)        ---------->DOF2       <---------MYB52(1)             <---------ANAC58          <---------ARR14(2)  <----------DOF2 >ARR14(2)    <---------AtLEC2    <----------DOF2 --------->At4g35610           <---------ZAT18 -ARR14(2)<-------GAMYB           ------>ZmHOX2a(1) <---------REM1(1)          <---------ZAT6   gaattgtcagtttgttgcttggagcagaacattgtcctttgcttttctcgggagatgtagaatttggatttggaaaaactagtgttcttttccaaagcct  6120300  Previous    Next  AGI:  At3g17860.1    Description:  JAI3/JAZ3/TIFY6B (JASMONATE-ZIM-DOMAIN PROTEIN 3). Identical to Protein TIFY 6B (TIFY6B) [Arabidopsis Thaliana] (GB:Q9LVI4;GB:Q56W78;GB:Q8LF26); similar to JAZ4/TIFY6A (JASMONATE-ZIM-DOMAIN PROTEIN 4) [Arabidopsis thaliana] (TAIR:AT1G48500.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO42344.1); contains InterPro domain ZIM (InterPro:IPR010399) Range:  from: 6119773    to: 6123025    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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