Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                               ----------->RAV1(1)                                                                        ------>MYB46(1)                                                                      ------->GAMYB                                                                     <---------MYB52(2)                                                                     --------->MYB46(3)                                                                     <---------MYB55(2)                              ------>ZmHOX2a(1)                     --------->ANAC58                           ------>MYB83                             --------->ANAC58            -----                        --------->MYB46(3)                    <---------ANAC58                  <----               <---------MYB52(1)                            <---------At4g35610        <------ZmHOX2a(1)              --------->TOE2(3)                              --------->At4g35610  <---------ARR14(2)          <-----------GT1  ------>MYB46(1)              <---------ANAC58-------->P--------->ARR14(2) ---------->DOF2       ------->TEIL                     <---------ANAC58------>MYB83  --------->LBD16 ------At4g35610      <-----------GT1                --------->TOE2(2)--------->AtMYB61 ============= ----->At4g35610  --------->At4g35610          --------->TOE2(3)    --------->ANAC46 <---------LBD16< ------RAV1(2)--------->TOE1(3)   <<<<<<<<<TBF1<----------DOF2<---------ANAC58 --------->MYB46(3) ---   gatgaaagttgtttacccttagatgaaccatccttcttcttcaaaccatctttaatctgcgtctgcttgcaaccaactccaacaaatccaggaataggga  6116100                                                                        <---------HSFB2a(2)                                                                        --------->HSFB2a(2)                                                                       ------>ZmHOX2a(2)                                                                      <------ZmHOX2a(2)                                                                      --------->CCA1(2)     <-------TEIL                                                    --------->ARR11(3)  <---------MYB46(3)                                                 <---------ARR11(3) <---------TOE2(2)                                                   <---------AGP1 <---------TOE1(2)                                              --------->MYB52(1) ---->ARR14(2)                                           --------->ALFIN1       <---------YAB1 -----ARR14(2)       --------->ARR14(2)          <---------ANAC46    <---------ARR14(2) ====HOX2a_HOX2a     <---------ARR14(2)        --------->ARR14(2)    --------->AGP1 ---------------------WRI1                     <---------ARR14(2)    --------->ARR14(2)         <---- --->ZmHOX2a(2)  <---------At4g35610        ------>ZmHOX2a(2)   ----------->RAV1(1)     --------->MYB52(1)   tcggaggttcatccttggaagcggatttagacttcttcttatctgatcgtatcggagagttggagccaacagatctgggactattagagctatcgggact  6116200             --------------->AGL15         --------->GLK1(1)                                                                          <         <---------GLK1(1)                                                                          -        <---------GLK1(2)                                                                          --   --------->CCA1(2)                                                                               --   <------ZmHOX2a(2)                                                     <---------MYB59         ----  --------->AGP1                                            <---------At4g35610                 -----  <---------ARR14(2)                                        --------->LBD16                     -----  <---------ARR11(3)                                        --------->At4g35610                 -----  --------->ARR11(3)                                    --------->ARR14(2) ------>MYB83       -------  --------->ARR14(2)                                    <---------ARR14(2) ------>MYB46(1)    ------- -----HSFB2a(2)                                    <-----------GT1       --------->TOE2(3)    -------   agaagatccagatttcttcgaagagaagaagagtttgttcttgaataccattttttcgattccgctgattcaaaacctaatcgcttacacacttacacac  6116300       --------->YAB1       --------->TOE2(3)       --------->TOE1(3)      --------->MYB46(3)                                                                       ------      <---------ATHB12                                                                         ======     -------->P                                                                               =======     ------>MYB83                                                                             <------ZmHOX2a(2)     ------>MYB46(1)                                                                         -------- ---------ARR14(2)                                                                           <------- -------->ARR14(2)                                                                           <------- ---->MYB46(1)                                                                               <------- ---->MYB83                                                                                  -------- ----->AtMYB61                                                                               -------- ---->ANAC58                                                                                 <------- ---->ANAC46                                                                               ---------- ---->ANAC58                                                                           --------->HSFB2a(2) -->ANAC46                                   --------->ANAC46                          <---------HSFB2a(2) -->ANAC58                      --------->ZAT6                                        <---------LBD16 -->ANAC58---------->DOF2       <---------ALFIN1             <----------DOF2   ----------->ARR10   caaatccaaccataaatccagttgtcaatttccaacactcggacttcacgagagaacaaatagctttctctctcactcgctgagactctctggaagatct  6116400                                                                                                    -                                                                                                    <                                                                 --------->GLK1(1)                 <- >ZmHOX2a(2)                  ----------->HVH21         <---------MYB52(1)                         <- =======================HOX2a_HOX2a                   --------------->AGL15                        <- =======================HOX2a_HOX2a                   <---------------AGL15                 --------- ->ARR14(3)                   <----------ID1         <------------AtMYB77                   <-------- ----ARR10                   --------->DEAR3(2)    --------->MYB52(1)                      --------->AHL20(2) --ARR14(3)             <---------TOE2(3) --------->ANAC58      *TSS               <----------DOF2 <- --ARR14(2)       --------->ARR11(3)      --------->ANAC58--------->MYB52(2) <---------ANAC58      <- ->ARR11(3)      <------ZmHOX2a(1)   <------ZmHOX2a(1)=============================================== ->ARR14(2)    <---------TOE2(3) <---------ANAC46  --------->ARR14(2)        <---------ANAC58    <--- --ARR11(3)    <---------TOE1(3) <---------O2      <---------ARR14(2)      <-------TEIL---------->ID1 ->ARR10 <---------TOE2(3)<------ZmHOX2a(1) ---------->DOF2     ---------->DOF2 <---------ZAT18  <---   tcagagttttcgaggttaaggattttgaggaagcgacgaggaagacgaaagcgtaactgttagtgggaaagcctagattcagtgcctttgtcatttaatt  6116500                                                                                <--------HAHB4                                                                                <---------ICU4                                                                                --------->ATHB12                                                                                --------->YAB1 -------------->AGL15                                                          <---------ATHB12 ---------------AGL15                                                        --------->WOX13(1) ----------------AGL3                                                  <---------AHL20(2) ----------------AGL1                                                  --------->AHL20(2) --------ANAC58                                                       --------->AHL20(2) >AHL20(2)                                                            <---------AHL20(2) -AHL20(2)                                                         <---------AHL20(2) --------ANAC58                                                   <---------AHL20(2) ----------------AG    <----------DOF2                            --------->AHL20(2) ===============MADS_MADS                    <---------DAG2       --------->AHL20(1) ------AHL20(2) ------------>CBF          <-----------GT1         <---------AHL20(1) --------GT1  ----------->GT1  --------->ZAT6<----------DOF2     --------->AHL20(2)  --------->TOE2(3)   tacttgaaatggaaaacagtcaattctttgttaagactaaattttgacttttttgacttaaactaaaattaattttattcaatcatttcttaacaaaaca  6116600                                               <---------ARR11(3)                                               --------->ARR11(3)                                           <---------ICU4                                           --------->YAB1                                        --------->WOX13(1)                                      <---------YAB1                     ----------->GT1             --------->AHL20(2)    <---------YAB1             --------->ANAC55(2)             <---------AHL20(2)    --------->ICU4             <---------ANAC55(2) --------->YAB1  ---    --------->AHL20(2)    <-----------GT1 <---------ATHB12 <---------MYB52(1)     --------->ANAC55(2)   actcaattttttcatataaatccacaaataacaacacattattaatcaatatctctattccattacttaacaaaaatgttattttcgtaattttagataa  6116700                                          <---------AHL20(1)                                  <---------AHL20(2)                      --------->ANAC46    --------->ARR11(3)                      --------->ANAC58    --------->AHL20(1)           <----------DOF2       <---------AHL20(2)                --------->REM1(1)             <---          ------>ZmHOX2a(2)      --------->AHL20(2)             ------>ZmHOX2a(2)       <---------ANAC58         <------ZmHOX2a(2)    --------->AHL20(2)              <---------ARR11(3)        <---------ANAC58        <---------ARR11(3)   --------->AHL20(2)               --------->ARR11(3)    ------>ZmHOX2a(2)        --------->ARR11(3)   <---------AHL20(2)           <---------At4g35610     --------->ARR11(3) ------->DOF2         --------->ANAC58--------->YAB1     --------->ICU4      <---------ARR11(3)  ----   caaagaaaacgatcttttgttttctcgcaaaataaataaatgaaaatattgtttaagtgctgatgatctacaactacaagatgtgatctagcttatgtga  6116800                                    <---------DAG2                             ------->TEIL             <---------MYB52(2)     <----------DOF2                 --------->ATHB12           --------->ZAT6 --------->ANAC58                         <---------YAB1    --------->DAG2        --------->ANAC58                         ------>ZmHOX2a(1)                <   ---------->DOF2      <---------ANAC58                 <----------ID1     --------->ATHB12     <--- --------->LBD16        <---------ANAC58      <-------TEIL     <---------ARR14(2)              <----- ------ARR14(2)        --------->ZAT14        <---------WRKY12 --------->ARR14(2)              ------ ----->ARR14(2)        <---------ZAT18        <---------WRKY38(1) --------->TOE2(3)           <------   atccgaaaagtttccactaacacagtgcatgcatccaactttatgcggtccatggcaaaacaacaaatcctcattggctcattgcgatacaaacttatta  6116900 ---------YAB1                     --------->PCF2                                          --------->ANAC58 ------YAB1           <---------ICU4                                                       --------->AtLEC2 ----ICU4            ------>ZmHOX2a(1)                                                   <-----------RAV1(2) --->YAB1           --------->TOE2(3)                                                  <-----------HVH21 ---YAB1--------->CCA1(2)<-----------GT1            <----------DOF2      <-----------HVH21 --------->ANAC58   tgactattagatttgggccattccttattacattttgggcccatattagtcggacttttatattagtaatggacatgtcaagggagaagagtcaggcaaa  6117000  Previous    Next  AGI:  At3g17850.1    Description:  protein kinase, putative. similar to protein kinase, putative [Arabidopsis thaliana] (TAIR:AT1G48490.2); similar to IRE (INCOMPLETE ROOT HAIR ELONGATION), kinase [Arabidopsis thaliana] (TAIR:AT5G62310.1); similar to protein kinase, putative [Arabidopsis thaliana] (TAIR:AT1G48490.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO68239.1); similar to hypothetical protein OsJ_011826 [Oryza sativa (japonica cultivar-group)] (GB:EAZ28343.1); similar to hypothetical protein OsI_012847 [Oryza sativa (indica cultivar-group)] (GB:EAY91614.1); contains InterPro domain Serine/threonine protein kinase; (InterPro:IPR002290); contains InterPro Range:  from: 6109711    to: 6116464    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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