Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                        <---------O2                                                                      --------->TGA1a                          <---------YAB1                         <-----------------AGL1                      <---------YAB1                           <-----------GT1               --------->ANAC58                              ===================bZIP_DOF               --------->ANAC55(1)                           <----------DOF2               --------->ZAT6               --------->ANAC46                   --------->ANAC58    <---------TGA1a   --------->ARR14(2)               --------->ANAC55(2)                <---------ANAC46    --------->O2 --------->GLK1(2) ------ANAC46  --------->ANAC58                   --------->ANAC58  <---------ALFIN1    <---------ARR14(2) ---RAV1(1)    <---------ANAC55(2)             ----------->HVH21 --------->ANAC46 <---------GLK1(2)   tgtccattcccacttacacgtattatttatgaaacgttttgtttgttttgtgacgcatgggctctttaccccacttgggctcaagaatcgtatacactag  6093700                                  <---------ANAC55(1)                                  <---------ANAC55(2)                                  <---------bZIP60(2)                                  <---------ANAC58                                  <---------ANAC46                                  --------->ANAC55(2)                             --------->ANAC55(2)                             <---------ANAC58                             <---------ANAC58                          <---------MYB52(1)                     --------->ARR14(2)                     --------->TCP20                     <---------ARR14(2)                   <---------MYB46(3)                   --------->ABI4(2)                  --------->ALFIN1<---------ANAC58                 --------->At5g28300                            --------->AHL20(2)             --------->MYB52(1)<---------MYB52(1)               <---------AHL20(2)            ----------->HVH21<---------ANAC55(2)   --------->ANAC46     --------->TOE2(3) ------>ZmHOX2a(2)--------->ANAC58 --------->ETT(2)     --------->TOE1(3)<------ZmHOX2a(2) --------->ANAC58 <---------ETT(2)                        ----   aaaacaaccttaacctcacggtggatccgttacgttacgtgttcgcaatttccacgtagtcgacatataaattgagtaattctaaaactatccattttcc  6093800                                                       <---------ALFIN1                                                    <-----------GT1                                                   <---------CCA1(2)                  --------->YAB1          --------->YAB1                --------->ANAC58        --------->GLK1(2)                     <---------AHL20(2)                --------->ANAC58        <---------ARR11(3)                    --------->AHL20(2)           --------->WOX13(1)           --------->ARR14(2)                --------->AHL20(2)       <------MYB46(1)                  <---------ARR14(2)                --------->AHL20(1)       ----------->GT1                 <---------ARR14(1)     <---------MYB52(1)  --------->YAB1       <------MYB83   --------->MYB52(2)<-----------ARR10    <-------GAMYB<---------AHL20(2) ----->LBD16 <---------ATHB12          <---------GLK1(2) --------->ANAC46--------->AHL20(2)      ----   gaaatttgttggtaaatcaagcattagttgatagagacagagaatcttaagttatatccactccgttggacaaaaaaaaattaaaaataactcaaggaga  6093900                                                                 <---------TOE2(3)                                                              <---------YAB1                                                             --------->AHL20(1)                                                            <---------ICU4                                                        --------->AHL20(2)                                                        <---------AHL20(2)                                                    <---------AHL20(2)                                                  <---------AHL20(2)                             <---                                                 <---------AHL20(2)                              <---                                                 --------->AHL20(1)                        <---------AHL20(2)                  ----------->GT1                <---------AHL20(1)                       <---------YAB1        ----------->GT1        --------->ATHB12  --------->ARR11(3)                     --------->YAB1  --------->CCA1(2)       <-------TEIL           --------->AHL20(2)                     <--------HAHB4 ----->CCA1(2) --------->MYB52(1)                <---------ARR11(3)                    <---------YAB1   taagatagagaagaaaataactgttaaatacattgattaaaactaaactaatatatttttaaatattatggattagggaagatgggtctattattatttg  6094000                                                         ------->MYC3                                                         <-------PIF5                                                         ------->MYC2                                                         <-------MYC2                                                         <-------MYC3                                                         ------->PIF5                                                        --------->ANAC46                                                        <---------bZIP60(2)                                                        <---------TGA1a                                                        --------->ANAC55(2)             <-----------GT1                                                        --------->O2                   <---------YAB1                                                        =============================================                                                        --------->TGA1a              --------->YAB1                                                        <---------O2                 -------->ATHB1                                                --------->ATHB51                     <--------HAHB4                                                <---------ICU4                       --------->ATHB51                                                --------->AHL20(2)                   <---------ICU4                                                <--------HAHB4                      --------->ICU4                             <----------DOF2    <---------AHL20(2)                  <---------ATHB12                             =====================================bZIP_DOF          <---------ATHB51                             --------->TOE1(3)  --------->YAB1                  ------------>CBF                      -------->HAHB4            -------->ATHB1                 ------>MYB83                      <---------ICU4           <---------ATHB12             --------->MYB46(3)           <--------HAHB4    --------->TOE2(3) <---------ATHB51             --------->DEAR3(2)          <---------YAB1   ------->TEIL        --------->ICU4<---------ANAC58  ------>MYB46(1)     <---------TOE2(3)--------->YAB1         --------->WOX13(1)           <---------ARR14(2)  -------  <---------YAB1     --------->ICU4        ------------>CBF  <---------ANAC46 --------->ORA47(1) ------ANAC58        <---------ATHB51     --------->TOE2(3)  <---------ANAC58--------->DEAR3(1) ------ANAC58  <-----------GT1--------->DOF5.7(2)     <-----------GT1     --------->ARR14(2) <-------   ggtgattaatgtattattaactaattatgaactttaactaaaaacgtcaattattttcacgtggcatgaagttgaagaaccgaccaattattacaacaca  6094100                                                                                                 <---                                                                                                 <---                                                                                            <--------                                                                                            <--------                                                                                            <--------                                                                                            <--------                                                                                            ---------                                                                                            <--------                                                                                       <-----------RAV1(1)    *TSS                     <----------DOF2             ------>MYB46(1)             <----------DOF2 =MYC_MYB                 --------->ARR11(3)             -------->P               <---------ALFIN1 >GAMYB --------->REM1(1) <---------ARR11(3)             ------>MYB83         <-----------HVH21  <--- --ALFIN1     <---------CCA1(2)   <----------DOF2      --------->MYB46(3)     <-----------TGA1 ------   ctcttctcttacatctctatcttcttaagttctttcctttgttcttcgatttgatcaccaactctcacatatttcgaaatcgtcacactttgttgcgtgt  6094200                                                                                <---------ICU4                                                                                --------->YAB1                                       --------->CCA1(2)                        -------->HAHB4                                      --------->ARR14(2)                       <---------ATHB51 ------ANAC58                --------->ANAC55(2)                               --------->ICU4 ------ANAC46                --------->ANAC46                               --------------->AGL15 -ANAC58                     --------->ANAC58                              <-----------------AGL3 -ANAC46                     <---------TGA1a                           ------>ZmHOX2a(2) -ANAC58                     --------->TGA1a                         --------->ARR11(3) -ANAC55(2)     <---------YAB1        <---------ARR11(3)             <---------ARR11(3) >ANAC55(2)   <---------ICU4 --------->O2                         <---------WOX13(1) -ANAC55(1)--------->YAB1    <---------O2                     <---------HSFB2a(2)    <---------ANAC58 ------ANAC58--------->ICU4  --------->ANAC58                 --------->HSFB2a(2)    <---------ANAC58 --->REM1(2) <---------YAB1<-----------GT1                 <-----------GT1 ----------------->AGL3   cgtcttctctctctcataattcttgagtttcacgtctcaagatttgatcacttctgccaattttccagattgatctctctaattatggcttccatgagtt  6094300                                                                                     ------>NtERF2                                                                                    --------->RAP2.3(3)                                              ----------->HVH21                     --------->DEAR3(1)                                            --------->At4g35610                    --------->RAP2.3(1)                                            ----------->RAV1(2)                  --------->DEAR3(1)                                            <---------At4g35610       <------NtERF2--------->ORA47(2)                                            --------->ZAT2           --------->LBD16--------->DREB2C(2)                                     --------->TOE2(3)              --------->DEAR3(1)     <---------ZAT6                                     <---------DAG2                <---------LBD16------>NtERF2                          ====================================HOX2a_HOX2a        ------->GAMYB                 --------->ZAT14  <---------ALFIN1     ==============HOX2a_HOX2a--------->MYB46(3)               <---------LBD16   --------->MYB46(3)    <------ZmHOX2a(2)        --------->DEAR3(2)           <----------DOF2------>ZmHOX2a(1) <---------ZAT2    ------>ZmHOX2a(1)<---------At5g28300   tcgccttgaatcgcttctctggactctcctctaaaaccaccttatcagctgacttcgatccatcctctcgccggagttttctaccgccgactagagttgg  6094400                     <---------ARR14(2)                     --------->ARR14(2)                     --------->GLK1(2)                    <---------ARR14(2)                 <------NtERF2                 --------->RAP2.3(1)                --------->At4g35610                --------->LBD16                <---------ATERF1(1)                --------->ABI4(1)                ------>NtERF2               <---------DEAR3(1)               --------->DEAR3(1)               --------->ATERF1(2)               --------->RAP2.6(2)               --------->RAP2.3(2)               <---------ATERF1(2)               --------->RAP2.3(3)               --------->RRTF1(2)                                                           <--------               --------->RRTF1(3)                                                          --------->ETT(2)              --------->DEAR4(2)                                                           <---------WRKY12              --------->ATERF1(1)                                                         --------->TCP16(2)              --------->ERF1                                                             --------->PCF2              --------->RAP2.3(1)                                                        <---------ARR14(2)              --------->RRTF1(1)                                                         <---------TCP11(2)              --------->RAP2.6(1)                                                        <---------PCF5              --------->ORA47(2)                                                         <---------TCP20             <---------At4g35610                                                         <---------TCP16(1)             ------>NtERF2                                                          <-----------HVH21             <---------ATERF1(1)                                                 ------>ZmHOX2a(2)             --------->At4g35610                                             ----------->HVH21  -----             --------->LBD16                                               ----------------->AGL1             <---------RAP2.3(1)                                           <---------ANAC46<---------WRKY38(1)            --------->ANAC46                                               <---------ANAC58<---------ABI4(2)      ------>ZmHOX2a(2)                                                    <---------ANAC58--------->ZAT18     <---------GLK1(1)                                                     --------->ANAC55(2)<------     --------->GLK1(1)                                <---------ANAC46  ================HOX2a_HOX2a     <------ZmHOX2a(2)            ------>ZmHOX2a(2)   <---------ANAC58  ------>ZmHOX2a(1)--------->ARR14(2)    <---------AGP1--------->DEAR3(1)          --------->At5g28300    <---------ATHB12  <---------DEAR3(2)    --------->ARR11(3)          <---------ARR11(3)    <---------ANAC58  <----------DOF2<---------MYB46(3)    <---------ARR11(3)     ------>NtERF2<-----------HVH21           --------->ARR14(2)--------->ETT(1)   acttaagatctcttccgccgccgaatcggagcctgatctcagtgtcactgtaaatggcctgaaaatgcccaatcctttcgtgatcgggtcgggtccaccg  6094500                                                <---------RAP2.6(3)                                               --------->RAP2.3(3)                                               --------->RAP2.6(2)                                              <------NtERF2                                              --------->ATERF1(1)                                              --------->RAP2.3(1)                                             <---------ATERF1(1)                                             ------>NtERF2                                            <---------PCF5                                            <---------DEAR3(1)                                         <---------ANAC46                                        <------MYB46(1)             <---------MYB52(1)         <------MYB83            <-----------HVH21           <---------MYB46(3)       <---------ZAT14                 --------->MYB111(2)       --------->ZAT14                 --------->ALFIN1                            <---------DAG2    ------>MYB46(1)                   <--------P<-----------HVH21            --------->CCA1(2)    ------>MYB83--------->ICU4        --------->ALFIN1              --------->ARR11(3)  <---------MYB111(1)              <---------TOE1(3)                <---------ARR11(3) -ALFIN1<---------ALFIN1   <----------DOF2  <---------PCF2         <---------At4g35610 ---->LBD16 <-----------TGA1       <---------TOE2(3)             --------->SPL7 <-----------GT1 ---LBD16  --------->DEAR3(1)   <---------REM1(1)<------NtERF2  <---------MYB52(1) <----------DOF2   ggtaccaactacaccgtcatgaagagagcctttgatgaaggttggggggccgtcatcgccaaaaccgtaagctcttgagatttgactttttcaattttag  6094600  Previous    Next  AGI:  At3g17810.1    Description:  dihydroorotate dehydrogenase family protein / dihydroorotate oxidase family protein. similar to hypothetical protein [Vitis vinifera] (GB:CAN75682.1); similar to senescencs-related protein [Pyrus pyrifolia] (GB:BAA86060.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO68244.1); contains InterPro domain Dihydroorotate dehydrogenase, class 1, core; (InterPro:IPR005720); contains InterPro domain Dihydroorotate dehydrogenase, core; (InterPro:IPR001295); contains InterPro domain Dihydroorotate dehydrogenase, classes 1 and 2; (InterPro:IPR012135); contains InterPro domain Aldolase-type TIM barrel; (InterPro:IPR013785) Range:  from: 6094104    to: 6096572    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
	printer-friendly version