Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                                  -----                                                                        <-----------GT1--------->AHL20(2) --------AHL20(2)               --------->LBD16                        <---------AHL20(1)       <---- -------YAB1             --------->AHL20(2)                       --------->AHL20(2)   <---------AHL20(2) ------AHL20(2)          <---------AHL20(2)                       <---------AHL20(2) --------->AHL20(2) ----YAB1           <---------TOE2(3)                        <---------TOE2(3) <-----------GT1  >>>>> --AHL20(2)        <-----------GT1       <-------TEIL       <-----------GT1<---------DAG2       ----- -YAB1            <-----------GT1 ---------->DOF2          <-----------GT1 <----------DOF2      <----   tttattttgaaactacagttttaacattttattccccaaagagttcatcgtatataagtttttaacattttaatatacttttttcaaatttatatgttct  6086500                                                                                       --------->YAB1                                                                                      <---------YAB1                                                         <---------ANAC58            --------->ARR11(3) ---->HSFC1(1)                                           <---------ANAC58            <---------ARR11(3) -----HSFB2a(2)                                    --------->ATHB12                 --------->CCA1(1) >>ZML2                                         <---------ANAC58                --------->AHL20(2) ---->HSFB2a(2)              --------->TOE2(3)  <---------ANAC58             --------->TOE2(3) -----HSFC1(1)               <----------DOF2  --------->ARR11(3)       <-------TEIL --------->RVE1(1)   agaagttgttttgttcaaagtttgaaatcaactttagacttcgttgaatgtcttgatttgcttcacatgtcgattcatttcttaaaatatcatattttgg  6086600                  <---------ICU4                                          <------MYB83                  --------->YAB1                                          <------MYB46(1)                 --------->ICU4                                           ----------->GT1                 <---------ATHB12                                        --------->MYB59              ------>ZmHOX2a(1)                                    ---------->DOF2            --------->YAB1             <------MYB46(1)            <---------AHL20(2)           <---------YAB1     --------->At4g35610             --------------->AGL15    ---------->DOF2<---------TOE2(3)   <------MYB83           <---------------AGL15   tatttcaaaagttatcctaataatgttttctcttctgcatttggtcttaattctacaacctatactatataaagtttggttattagctatacagtatgag  6086700                                                                           ----------->HVH21                                <---------YAB1                             --------->WRKY12                              ----------->GT1                            <----------DOF2         ----                    <---------MYB59--------->ICU4   <----------DOF2  <-----------GT1         --------         ----------->GT1--------->YAB1              <---------DAG2--------->YAB1  --------->MYB46(3)<     --------->ATHB12------>ZmHOX2a(1) <------ZmHOX2a(1)          <---------ICU4 ------->TEIL--------   ttatacatgaatggtataagttcctaacatagttgtaattaggagtcatagctactttttaagttcgattatcacctttgacgaaccattctgaaacgga  6086800                                                                       --------->AHL20(2)                                                                       <---------AHL20(2)                                                                   <---------AHL20(2)                                                 --------->At5g28300   <---------AHL20(1)                                                <---------ANAC46   --------->YAB1                                                ----------->GT1    --------->AHL20(2)              <-                                                --------->RAP2.6(2)<--------HAHB4                  <-                                         <------------CBF          <---------ICU4                 ---          --------->ARR14(2)           --------->MYB46(3)          -------->ATHB1                 <--          <---------PCF2              ------------>CBF             --------->ATHB51              ----          <---------ARR14(2)        <---------WRKY12              <---------ATHB51              -----        <---------MYB46(3)          <---------WRKY38(1)           <---------ATHB12              -----    --------->ATHB12                <---------WRKY45              --------->ICU4               <----- ------->GT1                       <<<<<<<<<<WRKY11             --------->WOX13(1)  ----------->GT1-- ->ANAC58<------MYB46(1)           --------->WRKY18(1)        ------------>CBF     --------->DAG2<--- ---------AHL20(2) <---------ATHB12<<<<<<<<<<WRKY6   ---------->DOF2--------->AHL20(1)        <------ ->ANAC58<------MYB83   ------------>CBF<------------ATHB5    <---------ATHB12    ---------->DOF2<---   agttaattagtgggtctggcaatgaagtcaatacatggtcaacaattgggccgtaaaaaggcccatcaattattttattttttaaaaagtcaaaaccggc  6086900                           <---------WRKY12                     <---------ANAC58                     <---------O2                     <---------ANAC55(2)                                           <---------HSFB2a(2)                     --------->ANAC55(2)                                           <---------HSFC1(1)                     <---------ANAC58                                              --------->HSFB2a(2)                     <---------ANAC55(1)                                          ------>ZmHOX2a(2)       ----------->HVH21   <---------DEAR3(1)                                    --------->CCA1(2) -----NtERF2         <---------ANAC46                                            <------ZmHOX2a(2) --------At4g35610  <-------TEIL                                                >>>>>>>>>GATA-2 --->NtERF2  <---------ANAC46     --------->ANAC58                              <---------ARR11(3) -------RAP2.6(3)  --------->CCA1(2)                                  ------>ZmHOX2a(2)     >>>>>>>>>TBF1 ----->ATERF1(2)   *TSS    <---------WRKY38(1)         --------->AHL20(2)       --------->ARR11(3) ---->RAP2.6(3)   --------->ARR14(2)                   <---------ARR11(3)       --------->AGP1 ---->SPL7--------->ANAC46 --------->ETT(2)            <---------AHL20(1)       >>>>>>>>>GATA-4 ----ATERF1(1)    --------->ARR11(1)      --------->YAB1            <---------ARR14(2)   >>>>>>>>>TBF1 ------->At4g35610<---------ARR14(2)   <---------ICU4  --------->ARR11(3)       >>>>>>>>>GATA-3 ------ATERF1(2)----------->ARR10 --------->ANAC58     <---------AHL20(2)       >>>>>>>>>GATA-1>>>>>> ---SPL7--------->MYB52(1) <---------ETT(2)            --------->AHL20(1)      --------->GLK1(1)  >>> ------DEAR3(1)<------NtERF2   ------>NtERF2     --------->YAB1     --------->ARR14(2)  xxxxxxxxxxxxx   cggcagacgctcacggcgtagatacgtggtcgacgcgcgcataatcacaaatcagaatatattgtttttggatcggaagagagatctagaagaagaagaa  6087000                                                          <------NtERF2                                                          --------->ATERF1(1)                                                         ------>NtERF2                                                         <---------At4g35610                                                        --------->ATERF1(2)                                                        --------->DEAR3(1)                                                        <---------ATERF1(2)                                                       --------->RAP2.3(1)  <------NtERF2                                                       --------->ATERF1(1)  <---------MYB52(1)                                                       <---------RAP2.6(2) <-----------TGA1                                                    <--------P             <-----------HVH21                                                   <-------GAMYB           <---------RAP2.6(3)                                                  <---------MYB46(3)       ------>NtERF2                                               <-----------RAV1(1)        --------->ANAC46                 <---------ICU4            <---------ANAC46            ------>ZmHOX2a(2)    >>>>>>>>>TBF1--------->YAB1            <---------ANAC58           <------ZmHOX2a(2) >>>>>>>>>TBF1  --------->ICU4             <---------ANAC58 ------>NtERF2 --------->DEAR3(1) >>>TBF1        <---------ATHB51         <-----------HVH21<----------CDC5 --------->RAP2.3(3) >>>>>>TBF1    <---------KAN4(2)        <-----------RAV1(1)--------->DEAR3(1)   <---------ICU4 xxxxxxxxxx>smallRNA(se3)           <---------GLK1(2) <---------ATERF1(1)--------->RAP2.3(1)    -----   gaagaagaagaagggggaataatggcattgcaatggctgattctgtcgtatgtggttgccgccgaggtagcgatcgccgtcatcttgactctcccttacc  6087100                     <---------CCA1(2)                 ------->TEIL              --------->ANAC58                                   ------>NtERF2           <---------ARR14(2)                        --------->At4g35610           --------->ARR14(2)                        <---------At4g35610     <---------GLK1(1)        xxxxxxxxxxxxxxxxx>smallRNA(se3)              ------>NtERF2           --------->GLK1(1)      ------>ZmHOX2a(1)   <---------ANAC55(2)    ------>ZmHOX2a(1)       <---------TOE1(2)    ----------->RAV1(2)   --------->ANAC55(2)  ----------->RAV1(2)<------NtERF2 ---->MYB46(3)--------->ANAC58           --------->ANAC46       --------->DEAR3(1)     ------>ZmHOX2a(1)   caatgctcctgaagaaacgcatcgtatcacttatctcgctcatactcaatcctgccgcttccatcgtcgccttcgctggatttcaactcctcggtaatcg  6087200                                                                             <---------TOE2(3)                                                                        --------->YAB1                                                                       --------->ICU4                                                                       <---------YAB1                                                                      <---------AHL20(2)            -                                           <---------ALFIN1          --------->YAB1                 -                                        <-----------GT1     --------->HSFB2a(2)                     -                               ------>ZmHOX2a(2)            <---------HSFB2a(2)                <-----                             --------->ARR11(3)           ----------->RAV1(2)<---------TOE1(3)-------                             <---------ARR11(3) <----------DOF2  ------>ZmHOX2a(2) <---------ANAC46 <   cctctctatctctctctctctctatttcttagatcgtctaatttcccactctttttcttcgtctggatcgattataattaaggtttcgagttgggattaa  6087300       <----------DOF2      <---------DAG2                         --------->HSFB2a(2)                             -------- -------------->AtSPL8                       <---------HSFB2a(2)                      --------->ZAT6 -------------->AtSPL3                <---------RVE1(1)                    --------->At4g35610 -------->MYB59                       <---------CCA1(1)                    <---------At4g35610 ----AHL20(2)                        <---------ARR11(3)                    ----------->RAV1(2) -->AHL20(2)                         --------->ARR11(3)               <---------At4g35610    <------- ---------------AtSPL8    ----------->GT1 <-----------GT1             <---------ZAT18--------->ZAT18   ttttggtaccttttttttgttttggtaatggtttattcagatatttactggaagaatgagcataggctattgtgctcatctgaagtttgcactactacag  6087400  Previous    Next  AGI:  At3g17780.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G48440.1); similar to unknown [Populus trichocarpa] (GB:ABK93075.1) Range:  from: 6086919    to: 6088377    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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