Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                    <---------MYB46(3)                                                             <---------ZAT14                                                           <---------At4g35610                                                           <---------ZAT2                                                           <---------GLK1(1)--------->GLK1(1)                                                      <---------LBD16      <---------ARR14(2)                                                     ----------->RAV1(2)   --------->ARR11(3)                                                   --------->ARR14(2)      --------->ARR14(2)                                                   <---------ARR14(2)      <---------ARR11(3)                                                  <------ZmHOX2a(1) ----------->HVH21             ---------->DOF2                   <------ZmHOX2a(1) --------->ALFIN1     <<<<<<<<<<<<<<<<<LFY               ---------->DOF2    --------->At4g35610 <-------TEIL         < -------->YAB1                         <------ZmHOX2a(1)   --------->ZAT2 <------ZmHOX2a(1)  --------   tatgacaaaacagtggaaagtagatgagagagagaatgagaggaaagaaggaggaacctggagctcagtggtgacaggatattcatccatatcaacatag  6080500                 --------->YAB1           --------->GLK1(2)                      ----------->GT1           --------->ARR14(2)              --------->AtLEC2           <---------ARR14(2)      <---------TOE1(2)               <------MYB83           --------->ANAC58          <---------GLK1(2)        <---------TOE2(2)----------->HVH21      --------->TOE1(2)--------- ---------YAB1  --------->ICU4    <-----------RAV1(2)   ---------->DOF2   ----------->RAV1(2) ------------->WRI1           <---------ALFIN1   --------->ALFIN1  <------MYB46(1)        --------->ANAC58   ttcttattgacagaatccatgatgagtttgtcacactcaggttccatccaagtggtgacaaaggaggctaggttaagcctgggattaccatcaagcatca  6080600                                                                                                  ---                                                                                              -------                                                                                              <------                                                                                           <---------ICU4                                                                                          --------->AHL20(2)                                                                                    <---------ANAC55(2)                                                                                   <-------TEIL<-----            <---------ANAC55(2)                --------->ANAC58                   --------->CCA1(2)            --------->ANAC55(2)     --------->AtLEC2                             --------->ARR14(2)<-   --------->ATHB12         <----------DOF2    --------->ANAC58                  <---------ARR14(2)--   <---------ICU4   --------->At4g35610   --------->YAB1              --------->CCA1(2)   --------->ICU4  --------->ICU4   --------->ANAC58 --------->ANAC58                 <---------ARR14(2)   <---------ATHB51  <---------YAB1   --------->ANAC58 --------->ANAC58     ------->TEIL--------->ARR14(2)   <---------AHL20(2) >YAB1 --------->YAB1    <---------ARR11(3)<-----------HVH21         <---------ARR11(3) --------->YAB1   actcatcattgatcacttgataagcagcatctttgggcatgcaatggtcaggcatcttgaacctgtttcaatatatgcaaacagatacataaataattaa  6080700                                                                     ------->GAMYB                                                                 --------->MYB46(3)                                                          --------->TOE2(2)                                                          --------->TOE1(2)            --------->ANAC58                                                          <---------LBD16          --------->HSFB2a(2)                                                         ----------->RAV1(2)       <---------HSFB2a(2)   <-----------GT1                                       =====================RAV  <---------HSFC1(1) ------>AHL20(2)                                         <---------ZAT2         --------->ARR11(3) -->AHL20(2)                                           <---------ARR14(2)       <---------ARR14(2) ---AHL20(2)                                        --------->HSFB2a(2)        <---------CCA1(2) ----AHL20(2)                                       <---------HSFB2a(2)  --------->ANAC58   --------- --------AHL20(1)                       ----------->GT1--------->ARR14(2)--------->ANAC58  ---------- ------->AHL20(1)      --------->AHL20(2)          <---------LBD16----------->RAV1(1)  --------->ANAC58   atatataacaatgtagcatacaagattaaaaaaactaaaatgaggcaaaactctctggaacctgggaacaacagcacggacatatctagaagcaaaagtg  6080800                               <---------ANAC58                           <---------ANAC58                           <-------GAMYB                           <---------ANAC58                          <------MYB46(1)                          --------->MYB52(2)                          <------MYB83                          --------->MYB55(2)                                         <-----------HVH21                          <---------MYB46(3)                                       *TSS  <---------At4g35610                         <---------AtMYB61 <---------YAB1                      <-----------GT1                        <--------P   <---------YAB1                      --------->AHL20(2) >DAG2         <------NtERF2   <---------ANAC46        --------->At4g35610    --------->AHL20(1) >DOF2       <---------DEAR3(1)<---------ANAC58        <---------At4g35610 --------->AHL20(2) <------   gaatgcaaatgctcgtcggagtcagagttggttgcgagtaccattgtgtttgagttatgctgaattgttgaacataaaaatatactatgtcagaagcttt  6080900                                                              <---------MYB52(2)                                                              <---------MYB59                     --------->ANAC58                         <------------MYB.PH3(2)                     --------->ANAC58                       <-----------GT1                     ----------->GT1                   --------->YAB1             ----------->GT1                      --------->ARR11(3)        <---------WRKY18(1)       ---------->DOF2                       <---------AHL20(2)            --------->WRKY38(1)    --------->YAB1 ---------->DOF2           --------->AHL20(2)            ----------->HVH21 ----DOF2  ---------->DOF2            --------->ZAT6  <-------TEIL         --------->WRKY12       <--   tcacaaatataaagaaagtaagaaagcaaaaactctcttaacactaatttaagacattcatataactaactccccccttgaccctctcttccccttgaat  6081000         <-------TEIL      <------MYB83      <------MYB46(1)     --------------->AtSPL8     --------->MYB59                                                                    --------->ATHB12     <---------------AtSPL8          ------>ZmHOX2a(1)                                 ------>ZmHOX2a(1)  <---------ARR14(2)         --------->ATHB51                  --------->YAB1      <-----------GT1  --------->ARR14(2) --------->MYB46(3)       --------->AHL20(2)                --------->AHL20(2) -------LBD16<---------ICU4 <---------YAB1    <---------AHL20(2)                <---------AHL20(2)   tggggatttggtacattatttcaacaacttattattgtcctcaaacaattaaacagagaacaatatcagaatcactgcatatttatttcctgatttgaga  6081100                                                                                   --------->TOE2(3)                                                                                 <---------AHL20(2)                                                                                 --------->AHL20(2)  --------->AtLEC2                                  <---------GLK1(2)            <---------AHL20(1) <-------MYC2                            <------ZmHOX2a(2)   ------>MYB83        --------->AHL20(1) ------->MYC2                            <---------YAB1 <-----------GT1    --------->AHL20(2)    ---- <-------MYC3      --------->WOX13(1)   <---------ARR11(3)   ------>MYB46(1)  --------->AHL20(2) <--- ------->MYC3    --------->WRKY18(1)    --------->ARR11(3) <---------MYB59 --------->YAB1       <----   ccacatgcacaaatcgatggtcaatctgtctcttcttcccaagatcatagaccagattataccaaataccatctaaattataaaatattaatctcactat  6081200          <-----------HVH21          ----------->RAV1(1)         <---------ETT(1)                   --------->ARR11(3)         --------->ANAC46                   <---------ARR11(3)         ----------->HVH21      ----------->GT1      <------ZmHOX2a(2)              <---------TOE1(1)      --------->MYB52(1)   <------MYB46(1) --------->CCA1(1)                        <---------ANAC46 ----->ARR11(3)            <------MYB83    --------->RVE1(1)       --------->ANAC55(2)--------->ANAC46 ------ARR11(3)       --------->DAG2   --------->AHL20(2)         --------------->AtSPL8<------ZmHOX2a(1) -----CCA1(2)        ---------->DOF2   <---------AHL20(2)---------->DOF2      <---------AHL20(2)  ---   atctcaaatacccgacagacatataaagttggtcttgtgaataaaatacctttggatcagaaagtttctacgtactgtattgaattacgaggaacgatta  6081300                ----------->GT1           --------->ANAC46                                                                       ---           --------->ANAC55(2)           <------ZmHOX2a(1)                             <---------RVE1(1)          <-------TEIL               --------->CCA1(2)                                 <---------CCA1(1)         <-----------GT1           --------->CCA1(2)                                  --------->ARR11(3)     --------->AHL20(2) <---------AHL20(1)                                  <-----------GT1       ---   <---------GLK1(2)    --------->ARR11(3)            <-------TEIL  ------>ZmHOX2a(1) <---------ARR11(3) -------->RAV1(1)       --------->AHL20(1) --------->At4g35610    ----------->RAV1(2)<<<<<<<<<RAP2.2   caacagattatatacgtcttgtgatatatattgagagagataaggagctacaaagattcatgtttatctcctggctaatatccatttagatatttcagaa  6081400  Previous    Next  AGI:  At3g17760.1    Description:  GAD5 (GLUTAMATE DECARBOXYLASE 5); calmodulin binding. similar to GAD (Glutamate decarboxylase 1), calmodulin binding [Arabidopsis thaliana] (TAIR:AT5G17330.1); similar to GAD3 (GLUTAMATE DECARBOXYLASE 3), calmodulin binding [Arabidopsis thaliana] (TAIR:AT2G02000.1); similar to GAD4 (GLUTAMATE DECARBOXYLASE 4), calmodulin binding [Arabidopsis thaliana] (TAIR:AT2G02010.1); similar to glutamate decarboxylase 4a [Brassica juncea] (GB:AAS79670.1); similar to Glutamate decarboxylase (GAD) (GB:Q07346); similar to glutamate decarboxylase isozyme 1 [Nicotiana tabacum] (GB:AAC24195.1); contains InterPro domain Pyridoxal phosphate-dependent transferase, Range:  from: 6078818    to: 6080883    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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