Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                 --------->YAB1               --------->TOE1(3)               --------->TOE2(3)               --------->AtMYB61              <---------ATHB12              ----------------->AGL2                                                               --              --------->MYB46(3)             ----------->GT1            <---------LBD16      --------             ------>MYB46(1)              ------->TEIL                --------->ARR11(3)     --------             ------>MYB83            ---------->DOF2                  --------->GLK1(2)      --------             -------->P           --------->ANAC58           --------->ANAC58    <------ZmHOX2a(1)---           --------->AtMYB61      --------->ANAC58           --------->ANAC46<------ZmHOX2a(2)  -----          --------->MYB46(3)      --------->ANAC46           --------->ANAC58========================          <---------MYB52(2)  --------->YAB1<-----------------AGL3 <---------GLK1(2)    --------->ZAT18   acagaaaatgaaaccaaccataactagacaaattataagcaaagtacctgtaaatagagccataagccagattatctggatcaggacgagtgtccaagta  6072400    ------>ZmHOX2a(1)    <-----------HVH21   --------->TOE1(3)                                                        <---------ARR14(2) ------->YAB1                         --------->HSFB2a(2)                  <---------MYB52(1) ->ANAC58                             <---------HSFB2a(2)                <---------ANAC58 ->ANAC46<---------TOE1(2)         <-----------GT1               <-----------GT1 ->ANAC58<---------TOE2(2)       --------->CCA1(2)               --------->ZAT6 ------>ICU4                    --------->ARR14(2)              <---------YAB1    <----------DOF2 ---->YAB1                  <---------At4g35610        --------->LBD16   <---------ANAC58           < ==========HOX2a_HOX2a    --------->YAB1         <-------TEIL <---------ICU4--------->ARR14(2)    ---   ataatccttcacaggtttcgaatagtattcatcagatttacgagaacgagattcatccgaagcattatcactcttccgtttcttctttttctctcgcttc  6072500           <-----------TGA1          --------->bZIP60(1)                 ------>MYB46(1)                                  ------          --------->ETT(2)                    ------>MYB83                                    <------          <---------bZIP60(1) <---------HSFC1(2)     <-----------GT1                      --------->At4g35610         ---------->ID1       --------->HSFC1(2) --------->YAB1                <---------RVE1(1)  <-----------GT1       ---------->DOF2     ------->GAMYB                     <---------MYB52(1)  --- ----------DOF2<---------At4g35610          <---------MYB59     --------->ATHB12      <-----------HVH21 --->ZmHOX2a(1)--------->At4g35610  <<<<<<<<<TBF1--------->AHL20(2)  --------->At4g35610  <---------At4g35610   ctctttaccttgtcgtcatcagactccaaagacccttcttcttcaaccaaattataaaccctagcctgattagctaaaccgatatttccatcagctcctc  6072600                                                         <---------DEAR3(1)                                                        --------->ATERF1(1)     --------->LBD16                                                     --------->At4g35610       --------->ANAC55(2)                                                  ---------->DOF2             <-------TEIL                                              --------->DEAR3(1)              ------>ZmHOX2a(2)                                              --------->RAP2.3(2)            <------ZmHOX2a(2)                                             --------->DEAR3(2)             <---------ARR14(2)                                             --------->ATERF1(1)            <---------ARR11(3)                                             --------->RAP2.3(1)            --------->ARR11(3)                              --------->TOE2(1) <------NtERF2               --------->ARR14(2)                              --------->TOE1(1)<-----------HVH21           --------->GLK1(1)                             <---------LBD16 <------NtERF2  <---------ANAC46--------->AGP1        <-- >ZmHOX2a(1) <---------ATERF1(1)      <------ZmHOX2a(1) <------NtERF2      <---------GLK1(1)      <-- ---ALFIN1 ---------->ID1<---------ALFIN1   <---------ATERF1(1)   ----------->HVH21          <------- --->ZmHOX2a(1)         ----------->HVH21 <------ZmHOX2a(1)<------NtERF2  ----------->ARR10  <-------   cttcttcatcttcgtcgtctccagcctcgacctcggatgaggaaggagccgtcgaagcggcagcgttgatgacagagagatccgtagtgaagctagcgtt  6072700                                                                                               ------                                                                                              -------                                                                                              <------NtERF2                                                                                <---------ANAC58                                                                                <---------ANAC58                                                                                ----------->RAV1(2)                                                                                <---------ANAC46-----                                                                      <---------ANAC46        -------                                                                      <------NtERF2           -------                                                                      ----------->RAV1(2)    <-------                                                                     ------>NtERF2           ------>NtERF2                                                                    --------->DEAR3(1)      <--------                                                                    --------->RAP2.6(2)     ---------                                                                    --------->RAP2.3(3)    --------->ATERF1(1)                                                                    --------->RAP2.3(2)   <---------ATERF1(1) --------->ANAC58                                                  --------->RAP2.3(1)    <---------- --------->ANAC58                         --------->DEAR3(1)     --------->ANAC58        --------->DEAR3(1) -------ANAC58           --------->At4g35610                     --------->ANAC58    --------->ZAT14 -------ANAC58           <---------At4g35610                     --------->ANAC46    <---------ZAT14 --ANAC58     <---------HSFB2a(1)     --------->ZAT18    <---------LBD16        <---------ANAC55(1) --ANAC58  <------ZmHOX2a(1)        <---------GLK1(1)   <---------ANAC46      <-----------GT1<-------   gcgaagccattgaggagcattcgaaatagctgagatggagttcgccgaagtagggaagacggggaacaagccgcctgtagttacctgtgctccgtcgccg  6072800        --------->ARR14(2)     <---------ANAC46  <-----------RAV1(1)                                                                 ----------->GT1 --->DEAR3(1)                                                                         ------>ZmHOX2a(2) -->DEAR4(2)                                                                        --------->ARR14(2) ->NtERF2                                                             <---------AHL20(2) -->ATERF1(1)                         --------->MYB52(1)             --------->AHL20(1) -->RAP2.3(1)              ----------->GT1                           <---------AHL20(1) --ATERF1(1)             <---------LBD16                             <---------ARR11(3)    <---------ARR14(2) -DEAR3(1)              --------->MYB52(1)   *TSS    <---------AHL20(2)          --------->ANAC58 >DEAR3(1)             <---------ALFIN1     --------->GLK1(2)       ----------->TBP <---------ARR14(2) -HVH21 <---------ARR14(2) --------->LBD16 <---------ARR14(2)   <---------RAP2.6(3) --------->ARR11(3) --RAP2.3(1)          --------->MYB46(3)   <---------GLK1(2)    ------>NtERF2    --------->ANAC58   tcttctggtgtattcgacattacatccaccggaaaaaacaaaaccgattctgtattttttttgtgccgctatatatttctgccaaggatcgtgaatactg  6072900          <------------CBF         <---------ICU4         <---------AHL20(2)         --------->ATHB12     <---------AHL20(2)         -------->ATHB1      <---------YAB1         --------->ATHB51  <---------ICU4         -------->HAHB4   --------->AHL20(2)        <---------YAB1--------->AHL20(2)        <---------ATHB51  <---------AHL20(2)        <---------ATHB12  --------->ICU4                                <---------TOE2(3)        --------->ICU4<---------AHL20(2)                              <---------AHL20(2)     ------------>ATHB5   <---------ATHB51   <---------YAB1<-----------GT1    <---------MYB59 ----------->TBP          <---------TOE2(3) <---------ICU4    ----------->RAV1(1)   aataggcctaattattgggcctatataaataattaatgggctctattaacattgaaagaatttactcattgtttaatgttcaacaacattcgaatttgaa  6073000                                        --------->ANAC58                                        --------->ANAC46                                   <--------HAHB4                                   -------->ATHB1                                   <---------ICU4                                   -------->HAHB4                                   --------->ATHB51                                   --------->YAB1                        <---------AHL20(2)                        --------->ATHB12<---------ANAC55(2)                               -----------                       <---------YAB1   --------->ANAC58                                 --------->DAG2                    <---------AHL20(2)  --------->ANAC55(2)                        ----------->GT1                    --------->AHL20(2)<-----------GT1                        <---------------AtSPL8                   --------->ICU4 --------->ICU4                             <---------------AtSPL3               --------->At5g28300<---------YAB1             <---------MYB52(1)  <-------TEIL               <---------MYB52(1) <---------ATHB51     <-----------GT1       --------->DAG2              ----------->GT1  <---------AHL20(2)--------->AHL20(2)         ---------->DOF2          --------->ARR14(2)   --------->AHL20(2)<---------AHL20(2)     <---------YAB1  =============          <---------ARR14(2)  <---------WOX13(1)--------->AHL20(2)   <---------MYB52(1) ---------->DOF2          --------->MYB52(1)--------->ATHB12 --------->ICU4----------->GT1  =========================   ttcgaaactacataaccggtaaatatttattgattaattattacgccatatttaattttactcgttaattcgttatgaaaaagtacagcaaaaagtataa  6073100    ------->MYC2    <-------MYC4    <-------PIF5    ------->MYC4    ------->MYC3    ------->PIF5    <-------MYC2    <-------MYC3    <-------PIF4    ------->PIF4   --------->O2   --------->TGA1a                                                                           <-------   ========================bZIP_DOF                                                      <---------AHL20(2)   <---------TGA1a                              <------ZmHOX2a(1)                   <---------ANAC58   <---------O2 ---------->DOF2         <---------AHL20(2)             --------->DAG2<---------DAG2 >GT1        ----------->GT1        <---------YAB1                    ---------->DOF2<----------DOF2 ============bZIP_DOF     XXXXXXXXXXXXXXXXXXXX>MIR1888     --------->YAB1           <---------ANAC58- ============bZIP_DOF<---------KAN4(2)  --------->AHL20(2) --------->AHL20(2)     <-----------GT1----   aaaccacgtgcaatattgtaaagaataaactaaaatttgtgataaatttaggacagtctaataaaaattggcaaaagtgtcattttgcttttttatttcc  6073200                                                                                               <-----                                                                                               ------                                                                                               <-----                                                                                              <------                      <---------ARR14(2)                                                --------->ICU4                      --------->ARR14(2)                                           <---------ANAC58          --------->ATHB12                                                         <---------ANAC58          <---------ICU4                                                           ----------->GT1         <---------YAB1 ------>ZmHOX2a(2)                                          <---------ANAC46         --------->ICU4<------ZmHOX2a(2)                                       <-----------RAV1(2)         <---------ATHB12                                                    <-----------HVH21<------ ----GT1<---------TOE2(3)    ----------->GT1                            <---------GLK1(1)     <------ -------->AtMYB61     ------->TEIL                                      --------->GLK1(1)<---------ICU4 ----->ANAC46    <---------AtLEC2                ----------->GT1       xxxxxxxxxxxxxxxx>smallRNA(i)   caccaaaactaatgattttccatggatccaaaggtaaacacattttggagaaggtaaacacatttgttttggagaattccttcaggcgtaaatattgctt  6073300  Previous    Next  AGI:  At3g17740.1    Description:  similar to hypothetical protein OsJ_008259 [Oryza sativa (japonica cultivar-group)] (GB:EAZ24776.1); similar to hypothetical protein OsI_008933 [Oryza sativa (indica cultivar-group)] (GB:EAY87700.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO72013.1); contains InterPro domain Protein of unknown function DUF1740 (InterPro:IPR013633) Range:  from: 6067765    to: 6072845    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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