Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                            --------->bZIP60(1)                          --------->GLK1(2)                               <---------bZIP60(1)                         <---------GLK1(2)                     <------NtERF2                     <---------ZAT18                           <---------ZAT2    <---------YAB1                   --------->ANAC46            ---------->DOF2 --------->ZAT14   --------->ICU4                   <---------At4g35610       <---------AHL20(2)<---------ZAT14 --------->CCA1(2)    <                ---------->DOF2     <-------TEIL               <---------At4g35610          <--------      <---------ANAC46<---------ALFIN1       --------->AHL20(2)--------->At4g35610     <---------TOE2(3)   acattgagccgtttacattacagcccacattctgtagattcaaagaattaaaagtaattgcaggctgcagagcatgacatgatatgattaagttatgaac  6062100     --------->ANAC46     --------->ANAC58     --------->ANAC58  --------->TOE2(2)  --------->TOE1(2)       <---------ATHB12                                         <---------ALFIN1 --------->YAB1    ----------->HVH21 ----------->GT1                          <-----------GT1 ---------ATHB12 <---------ANAC55(2)--------->ANAC58               <---------ARR11(3)               < -YAB1           --------->ANAC55(2)--------->ANAC58               --------->ARR11(3)          <-----   aaatcatacgaaactgaacaagtgaccaatgaaacaaaacgctaaaacacatcaaatagtatacaacaaggtctcaaatatttccccactgagaagactt  6062200                             --------->At4g35610                                      --------->CCA1(2)                             <---------At4g35610                                 ------>ZmHOX2a(1)                           <-----------RAV1(2)       <------ZmHOX2a(2)           --------->LBD16                      <---------ARR11(3)             ===================================HOX2a_HOX2a              --------->GLK1(2)                <----------DOF2                 ----------->RAV1(2) ----------DOF2       --------->ARR11(3) <---------ANAC58            --------->ZAT18 <---------ARR11(3) -----DOF2   <---------GLK1(2)           <---------ANAC58            <---------ZAT18 --------->ARR11(3)   ttcttttctgagagggattcttaagagcttcagatgaagaagggcgtttctttggatcaacatggagcaagtgtgctactctcctgagatattagaaaca  6062300                                                           --------->ANAC58                                                           --------->ANAC58                                                         ---------->DOF2                                                      --------->ANAC58                                                      --------->ANAC58                                                    --------->DEAR3(1)                                                    <---------ANAC46                                                   --------->ATERF1(1)                                                  ------>NtERF2                                                  <---------RAP2.3(1)                                                  <---------ATERF1(1)                                                  <---------DEAR4(2)                                                  <---------ERF1                                                 --------->DEAR3(1)                                                 <---------DEAR3(1)                                                 <---------RAP2.3(3)                                -                                                 --------->ATERF1(2)                                -                                                 <---------RAP2.3(2)                              ---                                                 <---------ATERF1(2)                              <--                                               --------->LBD16                                    ---                                               ------>NtERF2                                      <--                                               <---------ATERF1(1)                      <-----------ARR10                                              <---------RAP2.3(2)                       --------->GLK1(2)                                              <---------RAP2.6(2)                       <---------ARR14(2)                                              <---------LBD16            --------->At5g28300      <--                                             <---------LBD16 ------------>CBF           --------->ARR11(3)                                  <---------ICU4--------->ATERF1(1)    <---------DEAR3(1)     <------                                  --------->YAB1<---------ABI4(1)   ----------->TGA1    --------->ARR14(2)                                 --------->MYB46(3)<------NtERF2    ----------->HVH21   <---------ARR11(3)        <-----------GT1       --------->REM1(1)<---------RAP2.3(1)<---------ICU4  ----------->GT1 ---   caaacctattacaccatttcgaatcaaattctacaaccattactgattccggcggcgagcaaagccaattctgacggtgaagagaggcaaaatctgggca  6062400      --------->LBD16     --------->RRTF1(2)     --------->ANAC58     --------->RAP2.6(2)     --------->RAP2.3(2)     --------->ANAC58    --------->RAP2.3(1)   <---------At4g35610                            --------->ATHB12   --------->At4g35610                           ----------->HVH21   <---------ATERF1(1)                       ------>NtERF2  --------->DEAR3(1)                        --------->ANAC58 -------->ZAT2                              --------->ANAC46                              <------MYB83 -------->At4g35610             <---------At4g35610                                       <------MYB46(1) ---->PIF5             --------->AHL20(2)   --------->ANAC58                        <---------ANAC46 -----MYC3             <---------ATHB51     --------->RAP2.6(2)                   ------>NtERF2 ---->MYC3         --------->AHL20(2) ------>ZmHOX2a(2)                          ----------->HVH21 -----MYC2         --------->YAB1    <------ZmHOX2a(2)                        ----------->HVH21 -----PIF5        <---------ATHB12  --------->ARR14(2)               --------->TOE1(3)  <--------P ---ZAT18       --------->WOX13(1)  <---------ARR14(2)           ---------->DOF2 --------->DEAR3(1) ---->MYC2    ------------>CBF  --------->At4g35610         <----------ID1    ------->GAMYB    ------   cgagcagccgcaaatttccaatcaaattattctcagccgatctcagacgccatgactggaacgggacaaaagcttaacatccgacgacgggttggagagg  6062500                                      --------->ANAC58                                      --------->ANAC58                                 <---------ETT(1)                                 --------->DREB2C(2)                                 --------->DEAR4(1)                                 --------->DEAR3(1)                                --------->DEAR3(2)                                 <---------ICU4                               ------>NtERF2                                      --------->ICU4                            ------>NtERF2                                   <---------ANAC46                            <-----------HVH21                             <---------ANAC46     <-----                ---------->ID1<---------ALFIN1         --------->YAB1  <-----------RAV1(1)     <-----              <-----------RAV1(1)--------->At1g77200  <-------TEIL   <---------ANAC46          ------        ---------->ID1     ----------->HVH21  --------->O2          <---------MYB52(1)<---------ICU4    <----------DOF2        --------->ANAC46   --------->ANAC46     <-------GAMYB  <---------YAB1 ----->GT1<----------DOF2  <---------ETT(1)   <---------O2        <-----------RAV1(1)<---------YAB1   taaattctttgtctttttgttgtttatctccgacaccgacaagcttagacgtcaaattcatagtttttctgttgtgttgtgttgatgattatttctgcct  6062600                                                   ----------->HVH21                                                 --------->At4g35610                                                 <---------At4g35610                                                 ----------->RAV1(2)                                                ------->TEIL                                              <---------ZAT14                             -----------                                              <---------ZAT18                        <---------CCA1(1)                                              --------->ZAT14                        <---------RVE1(1)                              --------->ZAT14 --------->ZAT18                       <---------ARR11(3) ----ANAC46             ------->TEIL     --------->ZAT14 ----------->GT1            --------->ARR11(3) ----------AGL15        --------->GLK1(2)<---------ZAT14--------->ALFIN1      <---------At4g35610 --------->AGL15     <---------YAB1  ------>ZmHOX2a(1)<---------ANAC46  <---------AtLEC2 <---------AHL20(2)   tatattgaacattcaatacccttatgaatctgtgttctccttctgtagtgcacctgaagtggagaaaacaatttgaatgaagcagagatatttagttaaa  6062700                        <---------GLK1(1)                  <---------DOF5.7(2)                                                           -----                  --------->MYB52(1)           --------->ANAC58                                 <----                --------->DOF5.7(2)     <---------bZIP60(2)                                     <----            <------MYB83--------->GLK1(1)      --------->ANAC58                 <---------MYB46(3)  <            <------MYB46(1)      <---------ZAT14                     <---------ARR11(3)         -----           <---------AtMYB61     --------->ZAT14       <---------ANAC46<-----------HVH21  <---------ALFIN1          <--------P   <---------ARR14(2)   ----------->HVH21        --------->ARR11(3)  --------->MYB46(3)        <---------REM1(1) <---------YAB1<---------ANAC46 ----------->GT1  >>>>>>>>>>>>>>>>>LFY------- >GT1   <---------ZAT6 --------->ARR14(2) --------->ALFIN1  <---------GLK1(1)  --------->ALFIN1 -----   tctgatggtagtgtaggtgttaacggatatgtttgtgaagtgatgtgcgacgctatggctggaaatacgaagatgtcaccagtggtgactcaccactgag  6062800        <<<<<<<<<TBF1     <-------TEIL    <---------ARR14(2)    --------->ARR14(2)    <---------ARR11(3)   <---------GLK1(2) --------->LBD16                                                                                   -- ---->At4g35610                                                                                  ---- -----At4g35610                                                                                  <--- -----ZAT2                                    <---------DAG2                               <---------ARR14(2) -----------RAV1(2)                           <----------DOF2                           --------->HSFB2a(2) ---->ZAT2                        <---------At4g35610                         ---------->ID1    <---- -->ZAT14         ------>ZmHOX2a(1)    <----------DOF2                 <---------AHL20(2)  --------->ARR14(2) ---->GLK1(1)<----------DOF2    <---------ALFIN1                     <----------DOF2    <---------HSFB2a(2)   ctccaggttcttcttctttcctctcattctctccccatctgctttccacttttttgcaaatggtcatacatcttttatttggcctatttttcagaaccgg  6062900                                                                                       --------->ZAT2                                                                                       <---------At4g35610                                                                                       --------->At4g35610                                                                                     --------->ZAT18                                                                              <---------At4g35610                                                                              ----------->RAV1(2)       <---------YAB1                                                         --------->At4g35610    --------->ICU4                                                          --------->REM1(1) --------->GT1                                                           <---------ANAC58 ----->ALFIN1                                       <---------MYB52(1)   <---------ANAC58 ------ANAC46                   <-----------RAV1(1)<-------GAMYB    <-----------RAV1(1)<---------ZAT2 -----MYB52(1)                  ------>ZmHOX2a(1) ----------->GT1   ======================RAV     <--   tgtgtaaatatgatagcaaacttgttccatgctcctgttggacaagacgaggctgttattagttgtggaattgttgcttcatctgagtctgctggtttag  6063000  Previous    Next  AGI:  At3g17720.1    Description:  pyridoxal-dependent decarboxylase family protein. similar to GAD5 (GLUTAMATE DECARBOXYLASE 5), calmodulin binding [Arabidopsis thaliana] (TAIR:AT3G17760.1); similar to Glutamate decarboxylase (GAD) (ERT D1) (GB:P54767); contains InterPro domain Pyridoxal phosphate-dependent transferase, major region (InterPro:IPR015424); contains InterPro domain Pyridoxal phosphate-dependent transferase, major region, subdomain 1; (InterPro:IPR015421); contains InterPro domain Pyridoxal phosphate-dependent decarboxylase; (InterPro:IPR002129); contains InterPro domain Glutamate decarboxylase; (InterPro:IPR010107) Range:  from: 6062452    to: 6063489    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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