Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                              --------->ATHB12                            <---------ICU4                           --------->ICU4                           <---------YAB1                 ------>ZmHOX2a(1)                         --------->YAB1                  <---------ANAC58                         <---------ICU4                  <---------ANAC58                        <---------ATHB51           --------->YAB1                        <---------ATHB12           <---------ICU4                        --------->ICU4            ===============HOX2a_HOX2a                <---------ARR14(2)                <------ZmHOX2a(2)                   <------ZmHOX2a(1)                --------->ARR14(2)               --------->ARR11(3)               <---------ATHB12 -------->AtMYB61<------ZmHOX2a(2)              ------->GAMYB --------------->AGL15--------->YAB1   aaccaaaacgatgatgccgatccacaataatgatttggagaaactcttaacgatcatgtccttgccagtttttgtatatgtccaatgaggaggcttaaga  6040400                                      <---------YAB1                                 ----------->GT1                               <---------ANAC58                               <---------ANAC46                          <---------At4g35610                     <--------P<---------ANAC58                                                   <--            <---------ANAC46------>ZmHOX2a(1)                          --------->ANAC58           ---         <-----------RAV1(1)----------->HVH21                          --------->ANAC58      <-------         --------->ICU4   ----------->RAV1(2)            <---------TOE2(3)---------->DOF2  <---------ETT(2)         =============================RAV   <---------ANAC46--------->ARR11(3)      <-----------GT1   cttgtttagtaatgttgtatatggttgctcctgacttgttaatattgtttgtaatcttcaaggatgttgttgcaagtaaagagaaatcaccagtctacaa  6040500                                 --------->MYB52(2)                             --------------->AtSPL8        ----------->GT1        <---------MYB52(1)                              <----------DOF2      <------ZmHOX2a(1)     <------NtERF2                                <---------ANAC58 <----------DOF2           ------>NtERF2                                 <---------ANAC58 -------ARR11(3)          --------->DEAR3(1)     --------->At4g35610   --------->ARR11(3) ------>ARR11(3)         --------->ATERF1(1)     <---------At4g35610   ------->TEIL           ------- --REM1(2)               --------->MYB46(3)     <---------TOE1(3)     <---------CCA1(2)    --------->MYB52(1)   gttctttaggaagataaatgaaacgtagccaccgttagttttatattcttaagcttacattgcaaaattgttgtatcttggctttgtacttactaatggt  6040600                           --------->GLK1(2)                         --------->HSFC1(2)                         <------MYB83                         <------MYB46(1)                         <---------HSFB2a(1)                         <---------HSFC1(2)                <---------YAB1                                 <---------YAB1              --------->YAB1                        <---------At4g35610     <---------GLK1(2)   --------->HSFB2a(1)        --------->At4g35610       <---------ZAT14 ---->GT1<----------DOF2----------->ARR10           --------->ZAT2   <---------TOE2(3)              <   atatttggattctttagtataatgggaaggttctgagtcaaaattttagttatgagctgtctaatttgattaagaattagtctagtgatgttttatcttc  6040700                                                     <---------ARR14(2)                                                     --------->ARR14(2)                                                    --------->GLK1(1)                                                    <---------GLK1(1)                                        <---------ZAT14                                        --------->ZAT18                              <---------AHL20(2)                --------->ANAC58        <---------ZAT18  --------->LBD16    <---------AHL20(2)      <---------ZAT6        --------->At4g35610  <---------YAB1            --------->AHL20(2)    <---------ANAC46        --------->ZAT2   <------------CBF            --------->ARR14(2)     -----    <---------ANAC58        <---------At4g35610--------->YAB1            <---------ARR14(2)<---------YAB1    <---------ANAC58        <---------ZAT2------------>CBF           <---------LBD16 --------->AHL20(2) ----------DOF2 --------->ANAC58        --------->ZAT14<---------LBD16 --------->LBD16<---------AHL20(2)   ggctttgagtgtgaaacgaagcaaaatgggagctgattagagtgtacaattgtgatatccggtttagtcaaaccggatttaatacattttaatttgatta  6040800                                                                                                <----                                                                                                -----                                                                                                -----                                                                                           <---------LBD16                                                                                          ------>NtERF2                                                                                          --------->MYB52(1)                                                                                       <---------ZAT2                                                                                 <---------DEAR3(1)                                                                                <------NtERF2   -----                              <<<<<<<<<TBF1                                    ------>NtERF2    <----                         <----------DOF2                                       --------->LBD16<------NtERF2                      ------->TEIL                                            <---------ATERF1(2)                     <---------CCA1(2)                                        --------->ATERF1(2)                   --------->ANAC58                                           <---------DEAR3(1)<----                   --------->ANAC58                                      <----------DOF2 ----------->HVH21                   <------NtERF2                                     <---------MYB52(1)--------->At4g35610                  ------>NtERF2                                     --------->LBD16    --------->ZAT2                 <---------ANAC58                                  <---------ANAC58    <---------At4g35610             <-----------RAV1(2)         *TSS      <---------YAB1  <---------ANAC58<----------CDC5 <- ---->ARR11(3)   <---------ANAC58      <---------MYB46(3)<---------MYB52(1)  <---------LBD16 --------   tctcggtttatttagtcaggcgcgcatctttcttcttcttgtggttcgatattcttatcgttatgtcttccgtcgctttgccggcgatgagctgccggag  6040900                                            ------>MYB46(1)                                        --                                            ------>MYB83                                          <--                          --------------------->WRI1                                              ---                     <-------TEIL          --------->MYB55(1)                                    ----                    --------->CCA1(2)     --------->MYB46(3)                                   ------                   ----------------------->TaNAC69(2)                                          <-----                   <---------ARR14(2)     <---------MYB55(2)                                   ------ --------->At4g35610--------->GLK1(2)     ------->PIF5                                        ------- <---------At4g35610--------->ARR14(1)    <-------PIF5              --------->GLK1(2)         <------ -----At4g35610    --------->ARR14(2)     <---------MYB111(1)      <---------GLK1(2)          ------- ---->At4g35610    <---------GLK1(2)     --------->At4g35610       --------->ARR14(2)       <-------- ---->GLK1(1)      --------->ARR11(1)    <---------At4g35610       <---------ARR14(2)     --------->ANAC58 ---->ZAT2        <---------GLK1(1)      <---------ZAT2         --------->HSFB2a(2)  <---------At4g35610 -----ZAT2       ----------->ARR10       ----------->RAV1(2)    <---------HSFB2a(2)  --------->At4g35610 -----GLK1(1)   <------ZmHOX2a(1)        --------->ZAT2      ------>ZmHOX2a(1)   <-----------GT1 ---- ----------RAV1(2)<---------HSFB2a(1)   ------->TEIL  --------->ANAC58        <----------DOF2------->TEIL ->LBD16   ----------->HVH21       ------->TEIL       --------->ANAC58 <---------HSFB2a(2)--------->ANAC58   ctcaggtgaacaagtgaaggagattcgcgtttgtacgaatcgcacctgccgaagacaaggctccttccagattctcgagactttaacagctctcgcacct  6041000                                                                                                 ----                                                                                                 ----                                                                                               ------                                                                                               <-----                                                                                               <-----                                                                                             ------>NtERF2                                                                                             <-------                                                                                            ---------                                                                                     <-----------TGA1                                           <---------LBD16                           <-----------HVH21                                           <------NtERF2                            --------->ANAC58       --------->LBD16                    ------>NtERF2                             --------->ANAC58  <---------GLK1(1)                      --------->ARR14(2)                         --------->bZIP60(2)  --------->GLK1(1)                      <---------ARR14(2)                         <---------bZIP60(1) ------->LBD16                          <---------At4g35610                         --------->ANAC46 -------HSFB2a(2)                       --------->ATERF1(1)                         --------->O2 <--- ------>HSFB2a(2)                      <---------ATERF1(1)                          <---------O2----- -->MYB46(1)                           <---------RAP2.3(1)                          --------->bZIP60(1) --->DEAR3(1)                         <---------RAP2.3(2)                           --------->TGA1a ----ALFIN1                           <---------DEAR3(1)                           <-----------STF1 --->AtMYB61                          <---------RAP2.6(2)                          <---------TOE1(2) -->At4g35610      <---------ZAT18 <---------ARR14(2)                              --------->SPL7---- ---At4g35610      <---------ZAT14<---------At4g35610                             ------>ZmHOX2a(1) -->ZAT2           --------->ZAT14--------->At4g35610   <---------O2             --------->TOE2(2)--- -ALFIN1--------->ANAC46         <---------MYB46(3)     --------->O2     --------->ARR11(3)--------->ZAT14 -->MYB83<-----------HVH21     ------>NtERF2 --------->LBD16             <---------ARR11(3)<---------ZAT18   cccgaactccgagtcactcactgcgcttgcctcggccgatgcggctccggtccaaacctcgtggctctccctcaaggtctcatcctacgtcactgcgcca  6041100                                                                     <------NtERF2                                                                     ----------->HVH21                                                                   --------->RRTF1(3)                                                                   --------->RAP2.6(2)                                                                   --------->ATERF1(2)                                                                   --------->RAP2.3(3)                                                                   --------->RRTF1(2)                                                                   --------->RAP2.3(2)        <---------ZAT2                                             --------->ANAC46        --------->ZAT2                                             --------->O2        <---------At4g35610                                        <---------ATERF1(2)    --------->HSFB2a(2)                                            --------->bZIP60(1)    <---------HSFB2a(2)                                            --------->DEAR3(1)           ----- ----->ANAC46                                                     --------->RRTF1(1)           ------ ----->ANAC58                                                     --------->RAP2.3(1)         ------- --->DEAR3(1)                                                     --------->ERF1              ------- ----ATERF1(1)                                                   --------->LBD16             <------- ----ALFIN1                                                      ------>NtERF2      --------->ANAC58 ----HVH21                                                       <---------ATERF1(1)--------->ANAC46 >ANAC46--------->At4g35610                       <---------HSFC1(2)------>NtERF2   --------->ANAC58 ------ALFIN1                               <---------ANAC46    --------->ANAC46 ----------->HVH21  - ->NtERF2  <---------At4g35610              <---------MYB46(3)  --------->DEAR3(1) <---------LBD16 -- ----->ANAC58                        ----------->HVH21        ------>ZmHOX2a(1) <-----------HVH21<--- --->NtERF2--------->At4g35610    --------->ALFIN1--------->HSFC1(2)<-----------HVH21   <----------DOF2   cgccttctcgagctgctgaaattttgttcagcctatgtggtgacggtcgtgaagcttcttcatcctccgccgtcacagacgctctcacggctttagcgtt  6041200                                       ----------->HVH21  ------>MYB46(1)               <---------HSFC1(2)  ------>MYB83                  --------->HSFC1(2) ---->WRKY38(1)                 --------->HSFB2a(1) --->DOF5.7(2)                  <---------HSFB2a(1) -->TOE2(3)                --------->LBD16 -->TOE1(3)                ----------->GT1 --ZAT6                   <---------ANAC58 ------>GAMYB             <---------ANAC58 ------->MYB46(3)         <---------ANAC46                                           ---------->ID1 ------DOF5.7(2)         <---------LBD16                                        ------->TEIL<--------   aaccaacaatgctctctctcaaatcgatgcgggaaatttctctgaagccgaagcacttctcactcaggtctgtagacttacgaatttgtctcaatttctt  6041300  Previous    Next  AGI:  At3g17668.1    Description:  heat shock protein binding / unfolded protein binding. similar to unnamed protein product [Vitis vinifera] (GB:CAO70432.1); contains InterPro domain Heat shock protein DnaJ, cysteine-rich region; (InterPro:IPR001305) Range:  from: 6039609    to: 6040495    Orientation: Forward Links:  TAIR  MIPS    AGI:  At3g17670.1    Description:  binding. similar to unnamed protein product [Vitis vinifera] (GB:CAO48454.1); contains InterPro domain Tetratricopeptide-like helical; (InterPro:IPR011990); contains InterPro domain Thioredoxin-like fold (InterPro:IPR012336); contains InterPro domain Tetratricopeptide TPR-1 (InterPro:IPR001440); contains InterPro domain Tetratricopeptide TPR2 (InterPro:IPR013105); contains InterPro domain Tetratricopeptide region (InterPro:IPR013026) Range:  from: 6040841    to: 6042202    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
	printer-friendly version