Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                     ------->MYC3                                                         --------->ALFIN1                                               ----------->GT1     <-------MYC3                                              ------>ZmHOX2a(2)    <-------MYC2                                              ========================HOX2a_HOX2a                                             --------->CCA1(2)     ------->MYC2                                             =========================HOX2a_HOX2a                                            <---------ARR14(2)    --------->O2                                            --------->AGP1        <---------O2                                            --------->ARR14(2)    <---------ANAC55(2)                                            <---------ARR11(3)    <---------ANAC46                                            <---------AGP1        --------->ANAC55(2)                                            --------->ARR11(3)    --------->TGA1a                            ---------->DOF2--------->RVE1(1)      <---------TGA1a                     --------->AHL20(2) ====================================bZIP_DOF                <         <---------ZAT6     ================================================bZIP_DOF             ----      ------>ZmHOX2a(1)   --------->YAB1---------->DOF2<-----------RAV1(1)           <---------ZAT6 - -----MYB52(1) --------->TOE2(3) <-------TEIL<------ZmHOX2a(2) ------>ZmHOX2a(1) <---------ZAT14 <---   tatgtctcctagtgttttcttaaaaaaatcaaaagttcataaaaaagatctgtaaaactgtggtcctcacgtgtaaatgagattgtagtgtttatggaat  6033800             <------MYB83             <------MYB46(1)                                                       <---------MYB52(1)           <---------WOX13(1)                                                    --------->ATHB12         --------->ATHB12                                   <---------YAB1    --------->ANAC46    <---------AHL20(2)        <-----------GT1  --------->ANAC46               --------->ANAC58 ---------AHL20(2)    <-----------GT1       <---------ARR14(2)                --------->ANAC58 ------ ----->AHL20(1)   <----------DOF2    <---------WOX13(1)<---------YAB1       <---------ALFIN1   <----- -------->AHL20(2)------>ZmHOX2a(1)--------->ATHB12 --------->ICU4     <-----------GT1 <<<<<<<<<MYB2 ------ARR11(3)---------->ID1<<<<<<<<<<GT-3b--------->ARR14(2)---------->DOF2------->GAMYB    <------   atataatttatagattggtccttttctctatttttcttcattgacatatatgccattttgatatgaaagaaataaacaacacaccattggttttctatat  6033900                                          ----------->GT1                                         --------------->AtSPL8                                         --------->DAG2                                         <---------------AtSPL8                  --------->YAB1                                   --------->AHL20(2)                          --------->ANAC58                                --------->YAB1                                 --------->ANAC58        <---------ARR11(3)    --------->AHL20(2)                            --------->ZAT14       <---------CCA1(2)    <----------DOF2                                 <---------ZAT18      ------>ZmHOX2a(1)  <---------ARR11(3)  <-------TEIL                   <---------ZAT14 --->ARR11(3)            --------->ARR11(3)<----------ID1                   --------->ZAT18 ----ARR11(3)          --------->ICU4  ---------->DOF2                <---------HSFB2a(2) ---CCA1(2)         <---------YAB1 --------->YAB1  <----------DOF2  <---------ANAC46              ---   ctcttctccttatcttcaaattgtcattatcttttaataaaaaaaggtacaaacttttattcagtttgtggtctggagagcactcaaaatactgtttaca  6034000                                   --------->CCA1(2)                            <---------YAB1                         <---------ATHB12            <---------YAB1--------->YAB1           --------->ARR11(3)  <---------WOX13(1)           <---------ARR11(3)--------->ATHB12            <---------YAB1     <---------WOX13(1) --------->ANAC58 --------->CCA1(2)   -------->HAHB4       --------->ANAC58 <---------GLK1(1)   --------->ATHB12 <------ZmHOX2a(2)   <---------ARR14(2)       --------->ARR11(3)  --------->ICU4    --------->CCA1(2)   --------->ARR14(2)       <---------ARR11(3)  <---------YAB1   --------->AGP1 --------->ARR14(2)     --------->ICU4             <---------ANAC46 ------>AHL20(2) --------->MYB59  <---------ARR14(2)  <---------ANAC46  ---------->DOF2      --------   taaaatgattgaagataattagatccaagcatgatggatatggatatgagttaatggtgttgattaagaacttataaagtctaatggtgttgatttagta  6034100                                     <----------ID1                                     <---------ETT(1)                 --------->DAG2                                    --------->DEAR3(2)               ---------->DOF2    <---------AHL20(2)             --------->MYB52(1)             --------->YAB1   --------->AHL20(2)        ------->GAMYB                 --------->DAG2 --------->TOE2(3)  <---------At4g35610             --------->ANAC55(2) --->GT1            --------->At4g35610  ---------->DOF2  ---------->DOF2                  ----------   aaacattaaatgccagataattagctgttaacagacataccgacaaagaattttaagtaataaagttagcataaagctatctgatttgtcagaatgtaaa  6034200                                                                               ------>ZmHOX2a(2)                                                                              --------->CCA1(2)                                                                              <------ZmHOX2a(2)                                                                             <---------AGP1                                                                             --------->ARR11(3)                                                                    ==================HOX2a_HOX2a                                                                    =================HOX2a_HOX2a                                                     <---------ALFIN1        <---------ARR11(3)                                                   ==================================HOX2a_HOX2a                                                   ===================================HOX2a_HOX2a                                          --------->YAB1--------->AtMYB61    --------->AGP1                            <---------GLK1(2)      ------>ZmHOX2a(1)------>ZmHOX2a(1)   ----------->GT1                        <----------DOF2   <--------ATHB1<---------ALFIN1 <---------MYB52(1)                 ------>ZmHOX2a(1)       <---------ATHB51        ====================HOX2a_HOX2a    *TSS  --------->WRKY12----------->ARR10  <---------ICU4      =====================HOX2a_HOX2a ->GT1    --------->WRKY38(1)            <---------ATHB12        ------>ZmHOX2a(1)--------->ANAC46   aacgagtccaagttgactccttcgagctttgattctcgttccaataatacttcctccaccatctctcctcctctcgttagatctaagaaacagagaaaac  6034300                                           <-----------HVH21                                          ------>ZmHOX2a(2)                                          ==================================HOX2a_HOX2a                                         <------ZmHOX2a(2)                                         ===================================HOX2a_HOX2a                                        <---------ARR11(3)                                        --------->ARR11(3)                                  <<<<<<<GRF7                                ------>ZmHOX2a(1)                                ----------->HVH21                    <------ZmHOX2a(1)                                =================HOX2a_HOX2a        --------->ANAC46            -----                     --------->GLK1(1) --------->GLK1(1)            --------->ANAC58 --------->HSFB2a(2)              ---------->DOF2   ================HOX2a_HOX2a         --------->ANAC58 <---------HSFB2a(2)   aagagagatagaatgagaaagggagttctaaatcctgacagagatcgtcagatagtggaacatgagttgcaggaaactgggtttagtccagaaacagaga  6034400                                                                        --------------->AtSPL3                                                                        <---------------AtSPL3                                                                        <---------------AtSPL8     <-                                                         <---------CCA1(1)                       <---                                                         <---------RVE1(1)                       ----                                                        <---------ARR14(2)                      -----                                                        --------->ARR11(3)                      -----                                           --------->GLK1(2)      <---------ZAT14               -----                                           ------->TEIL <---------ARR11(3)  ------->TEIL      <------ ----->DOF2                     <------ZmHOX2a(1)     ----------->ARR10 --------------->AtSPL8-------   aagtcaagaacaagaattttgaagaagatgaagaggaagaagatgaatctgtggagaagatatttgagagtagagaagtaccttcttggaagaagcagtt  6034500         <----------DOF2  --------->ALFIN1                                                                  <<<<<<<<<NAM <-----------HVH21                                                               <---------ICU4 --------DEAR3(1)                                                                --------->YAB1 ------DOF5.7(2)                  --------->ARR11(3)                            <---------HSFC1(2) ----->MYB52(1)                --------->ANAC58                                 --------->HSFB2a(1) ------>HVH21                  --------->ANAC58                                 --------->HSFC1(2) ---->WRKY12              <---------YAB1                                   ------->GAMYB ---->WRKY38(1)       <---------DAG2                            <-----------GT1 <---------HSFB2a(1) ---At4g35610         <----------DOF2          <-------TEIL------->TEIL --------->MYB52(1) -->At4g35610       --------->At4g35610        <---------YAB1--------->TOE1(3) <---------KAN4(2)   gacggtgagggcttttgtggtgagctttatgctaagcatcttgtttagtttcattgttatgaagcttaacctcacaacgggaatcatcccttcgctcaat  6034600                                                                                                  ---                                                                                                  <--                                                                                              <------                                                                                              -------          <----------DOF2                                                                     <------   <---------ZAT2                                                                      <-----------RAV1(2)   <---------At4g35610                       <---------GLK1(2)                      --------->ANAC46   --------->ZAT2              --------->ANAC58                                     --------->ANAC58   --------->At4g35610         --------->ANAC58         <---------AGP1              --------->ANAC58<  <-----------RAV1(1)   <----------DOF2    ----------->ARR10            --------->MYB46(3)<------ZmHOX2a(1)   gtctctgctggtcttttgggtttcttctttgtcaagacatggactaagatgctccataggtctggtctcttgaaacagccatttactcgccaggagaata  6034700  Previous    Next  AGI:  At3g17650.1    Description:  YSL5 (YELLOW STRIPE LIKE 5); oligopeptide transporter. Identical to Probable metal-nicotianamine transporter YSL5 (YSL5) [Arabidopsis Thaliana] (GB:Q9LUN2;GB:Q93ZI8); similar to YSL8 (YELLOW STRIPE LIKE 8), oligopeptide transporter [Arabidopsis thaliana] (TAIR:AT1G48370.1); similar to YSL6 (YELLOW STRIPE LIKE 6), oligopeptide transporter [Arabidopsis thaliana] (TAIR:AT3G27020.1); similar to YSL7 (YELLOW STRIPE LIKE 7), oligopeptide transporter [Arabidopsis thaliana] (TAIR:AT1G65730.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO48487.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO48467.1); similar to YSL trans Range:  from: 6034204    to: 6037235    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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