Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                   --------->ARR14(2)                         <---------DOF5.7(2)     ------->TEIL                         --------->MYB52(1)     <---------CCA1(2)            <----------DOF2                <---------ARR14(2)      --------->ZAT6   --------->ARR11(3)  --------->ARR14(2)    <-----------GT1   --------->YAB1     --------->LBD16             --------->GLK1(2)        ------- <----------DOF2   ---------->DOF2     <---------LBD16              --------->YAB1  <-------TEIL ----   agtctttaacagttcttttggcaaagataacgacttcattatccgggtctgtatccaaaaccaaaaacaagaatcagtgaatcacatacactgctactgt  6019300                                    ----------->GT1                                   <------MYB46(1)                                   <------MYB83                                           ------>NtERF2                                 <--------P                                              ----------->HVH21    --------->CCA1(2)         --------->DAG2           ----------->HVH21 --------->ANAC58--------->WRKY12 ---->GT1                   ---------->DOF2           --------->TOE1(3)---------->DOF2 <---------At4g35610 ----->YAB1------------------------>ANAC81           ----------->RAV1(2) --------->ANAC58--------->WRKY38(1)   aataagatgcgagaagatggaaaacaaaaaaaaaggtagggtttttaagagagaaacctgaagggttccaagtgaaagcatctttgtaacgctgaccttc  6019400                                       <---------ZAT18                                      --------->ALFIN1                                  --------->At4g35610                 <---------At4g35610                                  <---------At4g35610                 --------->At4g35610                  <---------------AtSPL8 <---------PCF2            <-------TEIL              ------->TEIL   gaattgaatgtccaatcgaataggtaccaagttttcagcagtgggcctatagctccgattacaaatcgattcatcagaaaaaacaaaaacacatgaactc  6019500                                                                       <---------ATHB12                                                                      ------>MYB46(1)                                                                <----------DOF2                                                               <---------DAG2                                                           ----------->HVH21                               <----------ID1             <xxxxxxxxxxxxxxxxxsmallRNA(le3)                              --------->DEAR3(2)------>ZmHOX2a(1)     ------>MYB83                ---                           <------ZmHOX2a(1)  ----------->RAV1(2)     -------->P                -----                  ---------->DOF2 --------->ANAC58     --------->MYB52(1)   --------->ZAT14    ------       <---------------------WRI1 --------->ANAC58    ----------->HVH21--------->MYB46(3)      ------   gatttcgatttcaaaacaaacaaagtagaggaagcgacgaaacttacatcctgaacttgacgggacctttccaaccagtagacactaaacccttcatcct  6019600                                                                                  ------>NtERF2                                                                                --------->RAP2.3(1)                                                                               --------->LBD16                                                                               <---------RAP2.3(1)                                                                               ------>NtERF2                                                                              --------->ANAC46                                                                              <---------RAP2.3(2)        <<<<<<<<<CBP60g                           ----------->GT1       <----------DOF2        <<<<<<<<<SARD1                           --------->ALFIN1      ------>ZmHOX2a(2)      <------    --------->LBD16                            --------->ALFIN1        *TSS  <---------LBD16 <------- ------->DOF2                         <------NtERF2                  --------->ARR11(3)      <------- ->ZmHOX2a(1)                         --------->At4g35610            <---------ARR11(3)      -------- --->TOE2(3)                        <---------WRKY12              --------->HSFB2a(2)        -------- --->TOE1(3)<-----------GT1         <---------WRKY38(1)           <---------HSFB2a(2)  --------->TOE2(3)   taaacccccaaatttcacaaattgagtttcgaagagagtcagcgagagagtgtgggaaatttcaatttctcgatctttttccggcgctagcttaatttat  6019700                                                                 <----------ID1                                                          <---------------AGL15                                                          --------------->AGL15                                                         <-----------------AGL2                                                         ----------------->AGL1                                                         ----------------->AG                                                         <-----------------AGL1                                                         --------------->AGL15                                                         <---------------AGL15            <---------TOE1(2)                                                        <-----------------AGL1           ------>ZmHOX2a(1)                                                        <-----------------AG            --------->TOE2(2)                                                        ----------------->AG            --------->TOE1(2)                                                        ----------------->AGL1        <------ZmHOX2a(2)                                                        <-----------------AGL2       <---------ARR14(2)                                                        ----------------->AGL2       --------->ARR14(2)                                                        <-----------------AGL3    ------>ZmHOX2a(2)                                                       <-----------GT1            ==============HOX2a_HOX2a ---AHL20(2)                                          <-----------GT1            ===============HOX2a_HOX2a --AHL20(2)                                         <---------HSFC1(2)           <------ZmHOX2a(2) --AHL20(1)                         <-----------GT1 <---------HSFB2a(1)         <---------ARR14(2) ->AHL20(1)                  <-----------GT1        --------->HSFB2a(1)         --------->ARR14(2) ->AHL20(2)              <----------DOF2            --------->HSFC1(2)      <---------LBD16   <------ZmHOX2a(2)   ttcagaatcacccttatattctaatgtctttacacatttcacctctaatttggaattttcccattttgggacgaattatctggatccgatcctacgatca  6019800                                                                                                    -                                                                                                    <                                                                                                  <--                                                                                                  ---                                                                                                  <--                                                                                                  ---                                                                                               <-----                                                                                               ------                                                                                               ------                                                                                              <------                                                                                             <-------                                                                                             <-------                                                                                       ------>MYB83--                                                                                       ------>MYB46(1)                                                                                      --------->MYB52(1)                                                                                     --------->TOE2(2)                                                                                     --------->TOE1(2)                                                                                     --------->AtMYB61                                                                                     ------->GAMYB---                                                                                    --------->MYB46(3)                                                                      <<<<<<<<<<<<<<<<<LFY  ---------                       <---------ANAC58       --------->AHL20(2)<---------YAB1      <---------MYB55(2)                       <---------ANAC58     <----------DOF2    --------->AHL20(2)   <---------MYB52(2)                 <-----------GT1        --------->ZAT18        <---------AHL20(2)  --------->ANAC58<-             <----------DOF2            <---------ZAT18     --------->TOE2(3)      --------->ANAC58--   attgcagcatttgggctttaaacgagcttgttagtcatttagtgggctttaaatgggctcaacattaaaattgtacattggtgacaaccaacgagacggc  6019900         ---------->DOF2       <------ZmHOX2a(2)       =============================HOX2a_HOX2a     <---------At4g35610     --------->At4g35610  <------NtERF2 --------->LBD16 ------>NtERF2 <---------RAP2.6(3) -------->ATERF1(2) ---------ATERF1(2) -------ATERF1(1) ------>MYB52(1) -------At4g35610 --->NtERF2 ----At4g35610                                                                    <----------DOF2 --->At4g35610                                                                    <---------DAG2 --->ATERF1(1)                                                                <---------ZAT14 ---ATERF1(1)                                                               --------------->AtSPL8 --DEAR3(1)                                                                <---------ANAC58 --RAP2.6(2)                   <<<<<<<GRF7                                 <---------ANAC58 ------->ATERF1(1)           ------>ZmHOX2a(1)                 --------->ANAC46 ------->TEIL    <---- ------>At4g35610            ----------->HVH21       <-------TEIL          <---------ANAC46     ----- >RAP2.6(3)       --------->YAB1         ------>ZmHOX2a(1)    --------->LBD16 <---------ZAT18   ----- --------LBD16  --------->GLK1(2)  --------->HSFB2a(1)<---------ANAC58    <-------TEIL<-----------GT1 ------->RAP2.6(3)<---------ICU4   <---------HSFB2a(1)<---------ANAC58 <---------HSFB2a(1)------>ZmHOX2a(1)   tgccggcagatcaaagagaatcattctcttcctgacaacgttcctctattccatgttcgtgctccccataacaacgttcgtgtacttttttcctagtcat  6020000                                                      <---------YAB1                                                    --------->YAB1                                                    <---------ICU4                                                   <---------YAB1                                                   --------->ICU4                                                 <--------HAHB4                                                 <---------ICU4                                   <--                                                --------->ICU4                                    ---                                         <---------ICU4                                       <------                                       <---------ARR11(3)                                     -------                                       <-----------ARR10                                     --------                                       --------->ARR11(3)                                    <------- -----ANAC55(2)                        --------->GLK1(2)                                 <---------YAB1 ---->ANAC55(2)  --------->ANAC46     --------->CCA1(1)             ---------->DOF2    ----------->GT1 ------>GT1     --------->TOE1(2)     --------->RVE1(1)    --------->YAB1          --------->ARR11(3)   gtaacacattcgaagaaacacacgattacaaacatataaaaaatctttgcattattattattcagaacaaaaaagagaagtcttggatattgtgatttat  6020100                             <---------AHL20(2) -------AHL20(2)             --------->AHL20(2)  <---------ATHB12 ------>YAB1           <-----------HVH21       --------->WOX13(1)             ---------->ID1 ---AHL20(2)     ---------->DOF2       --------->CCA1(2)                    --------->MYB52(2) -->AHL20(2)  --------->ANAC58       --------->AHL20(2)                     <-----------RAV1(1) ->AHL20(2)   --------->ANAC58   --------->AHL20(2)                         <---------MYB46(3) --AHL20(2)   --------->ANAC46   <---------AHL20(2)                       <----------DOF2           -   ttataagaaaaaacacactcaaaggtgtcatataaataaatatatgcatcaatcaattctccaacttcttcaaggcctttgttgcaatatgcagcaatag  6020200  Previous    Next  AGI:  At3g17590.1    Description:  BSH (BUSHY GROWTH). Identical to Chromatin structure-remodeling complex protein BSH (BSH) [Arabidopsis Thaliana] (GB:P93045;GB:Q9LUN8); similar to unnamed protein product [Vitis vinifera] (GB:CAO70949.1); contains InterPro domain SNF5/SMARCB1/INI1; (InterPro:IPR006939) Range:  from: 6017216    to: 6019671    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At3g17600.1    Description:  IAA31 (indoleacetic acid-induced protein 31); transcription factor. Identical to Auxin-responsive protein IAA31 (IAA31) [Arabidopsis Thaliana] (GB:Q8H174;GB:Q9LUN7); similar to IAA30 (indoleacetic acid-induced protein 30), transcription factor [Arabidopsis thaliana] (TAIR:AT3G62100.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO70950.1); contains InterPro domain AUX/IAA protein; (InterPro:IPR003311); contains InterPro domain Aux/IAA-ARF-dimerisation; (InterPro:IPR011525) Range:  from: 6020031    to: 6021148    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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