Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                  <---------ANAC55(1)                                                                <---------ANAC58                 <---                                                                <---------ANAC46                 ----                                 <---------ATHB12     <---------ICU4                            <----                                 --------->MYB46(3)   <---------------AtSPL8                ---------                --------->MYB59 ------>MYB46(1)       --------------->AtSPL8                <--------          --------->AHL20(2)    ------>MYB83    --------->At4g35610                      --------->AHL20(2)      --------->MYB59           -------->P      <---------ZAT2  <---------ANAC58    --------->TOE2(3)    <---------MYB52(1)        --------->AtMYB61 <---------At4g35610                 <---------MYB59   <-----------HVH21         --------->MYB46(3)--------->MYB52(2)           <---------ICU4<---------AHL20(2)  ----------->GT1        <---------MYB52(2)<---------ZAT6 <-------TEIL   --------->YAB1  <---------AHL20(2)   aaaccggttagataaattttggtccaaacaaaccaaccatttagagtgttagctgataagtacattacttgtgtatcaaaattatacctaaataaatctt  6009000   <----------DOF2                 <----------DOF2  <---------ANAC58         <---------GLK1(2)       ------>ZmHOX2a(2)  <---------ANAC58         <---------ARR14(2)    <-----------ARR10 ------ICU4                --------->ARR14(2)    --------->ARR11(3) ----->ATHB12           --------->ANAC58         --------->ARR14(2) -----YAB1              --------->ANAC58     ----------->RAV1(2)                     <---------CCA1(2) >ARR11(3)     <------ZmHOX2a(1)   <---------DAG2<---------ARR11(3)         <---------ARR11(3) -ARR11(3)  <-----------RAV1(2)   <------------------------ANAC81           --------->ARR11(3)   cattgctttgtttcacaggagaagacacgaattctcactttttcttcgcctgatcttcactcttcttcgattgtataagctcttcttctatctaatcctt  6009100                                          <---------ANAC55(1)                                          <---------ANAC58                                          <---------ANAC46                               --------->MYB59                               <---------TOE1(3)                               <---------TOE2(3)                                            <--------                          ------>ZmHOX2a(1)                                         <---------ARR11(3)                        ------>ZmHOX2a(2) <---------ANAC58                   ------>ZmHOX2a(2)                <---------AHL20(2) <-------TEIL     --------->YAB1    <-----------GT1 ------>ZmHOX2a(2)   gttctgcgattgttctaaatatttgatcctgtttaggttcgatttcgtgttccatcatcgtcttctagggtttaactgatcgccttgatctccaatgctt  6009200                  <---------STY1(2)       <---------YAB1--------->MYB59                                   --------->ICU4       <---------AHL20(2)     <----------DOF2                        --------->YAB1                <-    --------->AHL20(1)<------MYB83                        ------>ZmHOX2a(1)                       <--    <---------AHL20(1)<------MYB46(1)                 --------->ARR14(2)<---------ICU4            <-- --------->AHL20(2)<---------MYB52(1)            ------>ZmHOX2a(2)  <---------YAB1           -------- -ATHB12       <---------MYB52(1)                ================HOX2a_HOX2a           <---------MYB52(1)   cgattatatattattcggctagttaggtttcggtttttggttcagttttgatccagtttcctccatagttgtgataatgagttttaatcgttgtttcatt  6009300     <---------ARR14(2)                                         <----------DOF2     --------->ARR14(2)                                   <-----------RAV1(1)     ------->TEIL                              <---------ARR11(3)    <---------CCA1(2)                      <---------AHL20(2)  <---------ANAC58 ---------DOF2                         --------->ICU4--------->YAB1        ----------->GT1 -------ANAC58                  ---------->DOF2--------->ARR11(3)   <----------DOF2                -- -------ANAC58        <---------MYB46(3)   --------->AHL20(2)  <---------ANAC58       <-----------HVH21 ->ATHB12  <----------DOF2  <---------ZAT6--------->AHL20(2)<---------MYB52(1)      --------->MYB59--   gcttttgtatctgctttctccaagttgttagtgttaaagccctaattaatatctaacatactgttgctttctttcttatgtaaaatcaggtcagaaacca  6009400                                                                         --------->REM1(1)                                                                         --------->O2                                                                         <---------ALFIN1                                                                         --------->bZIP60(2)                                                                       ----------->RAV1(1)                                                                       <---------ALFIN1                                                                     <-----------HVH21                                 --------->ANAC46                    --------->LBD16                           ------>ZmHOX2a(2)                         ------>NtERF2                          <------ZmHOX2a(2)                         --------->ANAC58                         --------->ARR11(3)                         --------->ANAC46                         <---------ARR11(3)                         --------->ANAC58             *TSS        --------->ARR14(2)                        <---------LBD16 ------->ANAC58          <---------ARR14(2)                    <---------GLK1(1) ------->ANAC58     <-----------GT1                            --------->GLK1(1)     --------->DAG2--   caagacaaacaaacaaggatgtttaccgatcttccacgagatttagaaacagaaatactctcaagagttcccgccacatctctacaaaaattgaagccta  6009500                                  --------->GLK1(1)                                  <---------GLK1(1)                              --------->ANAC55(2)                              --------->HSFB2a(2)                              <---------ANAC55(2)                             ------>ZmHOX2a(2)                             <---------LBD16                             =================HOX2a_HOX2a                            <------ZmHOX2a(2)                            --------->CCA1(2)                            ==================HOX2a_HOX2a                            --------->ARR14(1)                           --------->ARR14(2)                         <---------At4g35610                <---------DAG2<---------HSFB2a(2)                     <------MYB83            <---------ZAT14--------->AGP1                             ----------->GT1            <---------ZAT18<---------ARR14(2)      --------->ALFIN1   <------MYB46(1)            --------->ZAT18--------->ARR11(1)     ------->MYC3       <---------DEAR3(1)         <---------MYB46(3)--------->ARR11(3)     <-------MYC2   --------->DAG2        --------->ALFIN1   <---------ARR11(3)     ------->MYC2 ---------->DOF2 <---------At4g35610   --------->MYB52(1)  ---------->DOF2 ------>ZmHOX2a(1)       <---------ARR14(2)          <--------- ------->AtLEC2 <----------DOF2--------->LBD16    <-------MYC3 --------->ARR14(2)          <---------LBD16   cttgcaaacggtggtacactttattcaaagatccggaattcctcaagaagcatgtgggtagagcggaaagggaggtgatttcgctgatgagtctcagggt  6009600                                <---------ZAT2                                                  -----                                <---------ZAT14                                                 <----                                --------->ZAT2                                                  <----                                --------->ZAT14                                              --------                                --------->At4g35610                              ----------->GT1-----                                <---------At4g35610                             --------->ARR11(3)                     <---------HSFB2a(2)                                --------->GLK1(2) --------->ARR11(3)                     --------->HSFB2a(2)                  <-----------GT1       <---------ARR11(3)<--         <---------ZAT6       --------->ANAC46         <<<<<<<<<MYB98  <---------ARR14(2) <---------ARR11(3)         ----------->GT1 --------->ARR14(2) ----------->HVH21          <---------GLK1(2) --------->RVE1(1) --RAV1(2)          <---------LBD16 <---------ANAC46 ----------->GT1   --------->ARR14(2)--------->CCA1(1)   ttattcacttagtgttaatctctctggaatccacagcagcgttgaaatgacaggtatgttaaacagtctcaaggattctgaagatgtcaaaatatctgac  6009700                             --------->DEAR3(1)                             <---------ALFIN1       <---------ZAT14       --------->AtMYB61                                        ------>ZmHOX2a(2)       --------->ZAT18   <---------ZAT18                                             <------ZmHOX2a(2) ---->TGA2(1)            --------->ZAT14  <---------ZAT14                           <---------ARR14(2) -----TGA2(1)            <---------ZAT14  <---------ZAT18                         <---------MYB46(3) -----bZIP60(1)          --------->ZAT18  --------->ZAT14                        --------->ALFIN1 --->HVH21  ----------->GT1 --------->MYB46(3)                                 --------->ZAT2 ---->bZIP60(1)    --------->ATHB51----------->HVH21                         <-----------RAV1(2) -------ZAT14     <---------YAB1--------->DEAR3(1)  <---------ANAC46 ----------->GT1--------->ARR14(2)   atcactgagtgcaacggtttattattgtgcaccaccgatgacagtagacttgtggtttggaacccttatactggtgaaaccaggtggatcccttacaaat  6009800                                                                                           --------->ANAC58                                                                                           --------->ANAC46                                                    <---------ATHB12                      <---------LBD16                                                    --------->AHL20(2)                <-----------GT1                                            ----------->RAV1(1)           --------->ARR14(3)                                      --------->CCA1(2)                   --------->ARR11(3)                                     <---------ARR14(2)                   <---------ARR14(3)      <---------DAG2<---------HSFB2a(2) --------->ANAC58                  --------->GLK1(2)--------->ANAC58  ------->GAMYB   ------->TEIL       --------->ARR14(2)                   <---------ARR11(3)   <----- <---------MYB52(2) --------->HSFB2a(2) --------->ANAC58           <----------ID1  --------->ALFIN1 -   ccaactcaccttatgaaatgtaccagaagtttgttttgggatacgacaacaccaataaatctcgctatagctacaaaatcttgaggtgttaccacggctt  6009900  Previous    Next  AGI:  At3g17570.1    Description:  F-box family protein. Identical to Putative F-box/Kelch-repeat protein At3g17570 [Arabidopsis Thaliana] (GB:Q9LUP1); similar to F-box family protein [Arabidopsis thaliana] (TAIR:AT3G17530.1); similar to MdSFBB3-alpha [Malus x domestica] (GB:BAF47179.1); contains InterPro domain Cyclin-like F-box (InterPro:IPR001810); contains InterPro domain F-box associated type 1 (InterPro:IPR006527) Range:  from: 6009413    to: 6010568    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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