Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                    <----------DOF2                                                                              <---------WOX13(1)                                                                           <---------YAB1                                                                         <---------ANAC46                                                                       <---------ZAT14                          ----------->GT1                          --------->ALFIN1                         >>>>>>>>>TBF1             <---------ANAC46<---------AtMYB61     <---------MYB52(1)                     <---------At4g35610           <---------bZIP60(2) <---------At4g35610  ---------                     --------->At4g35610    <---------At5g28300 <------ZmHOX2a(1)<---------ANAC58                   --------->HSFB2a(2)    <---------ZAT14    --------->HSFB2a(2) <---------ANAC58 ----->GT1         <---------HSFB2a(2)    --------->ZAT14    --------->LBD16--------->ATHB12<--------   ttatataacttatatcaagtttcagaagaagaaaaaaacctctgtttactgtgatgtgttctccgaggaatggtgctgtgattgcttctctgttatgtat  6000500                                     <---------ANAC58                          ------->MYC3                         --------->TGA1a                         <---------O2<---------ANAC55(2)                         --------->ALFIN1                                                           <                         ==========================================bZIP_DOF                         <                         <---------TGA1a            <---------GLK1(2)            <---------ZAT6     =                         --------->O2<---------ANAC58                          <---------ANAC58     -                         <---------ANAC58 <---------ANAC58                     <---------ANAC58     -                         <---------ANAC46 <---------ANAC46                  <---------ARR14(2)      <                         <---------ANAC58 <---------ANAC58                  <---------GLK1(2)       -          --------->CCA1(2)          --------->ANAC55(2)      <---------ANAC58 <---------ANAC46     <     ==============================bZIP_DOF        --------->ZAT2 <---------HSFB2a(2)    <---------MYB46(3)     ---------->DOF2 <------ZmHOX2a(1)   <------NtERF2        <---------ANAC58<-------TEIL <---------ARR14(2) >ANAC55(2)   <------MYB46(1)       <-------TEIL   <---------ZAT2 --------->HSFB2a(2) <---------ANAC46 -ANAC55(2)   <------MYB83<-------MYC3 --------->ALFIN1 <----------DOF2     --------->ARR14(2) ------   tagttgaaaaagagataggtttaggacgcgtggctaagtacgtggcgagtaccagcttcttttggcttctcgattttggattcgtgttaagtggttcttg  6000600           --------->ANAC58           --------->ANAC58           --------->ANAC46   <-----------HVH21 ------->MYC3 <-------MYC3 ------->MYC4 <-------MYC4                         <---------ANAC46 ------->MYC2                        <---------LBD16 <-------MYC2                   --------------->AGL15 --------ABF1                   <----------DOF2 ---------TGA1a                 <---------------AGL15 ==========================================bZIP_DOF -------->O2                   <---------ANAC58    --------->ANAC58 -------->TGA1a                <---------ANAC58    --------->ANAC58 ---------O2               <------------CBF     ------>MYB46(1)           <---------At4g35610 -------->ANAC55(2)    --------->ANAC58      --------->DEAR3(2)           --------->At4g35610 ---------ANAC55(2)    --------->ANAC58--------->LBD16                  --------->REM1(1)       ----- ----->HVH21  --------->MYB52(1)<---------DAG2  ------>MYB83---------->DOF2 ------->GAMYB    <-------   acacgtgttacacaaacaacgaggcaagcgattgctttttgcggaaaaccgactcgcaaaaacaaagagaggcttcaactgaaacacatctgtgaagcta  6000700                                                      --------------->AGL15         ------------>CBF    --------->YAB1         ------------>CBF  <---------ANAC46       <----------DOF2         <----------DOF2  <---------ANAC58   <---------ZAT18           <---------At4g35610  <---------ANAC58  --------->ALFIN1         --------->ZAT18          <----------DOF2 --------->TOE1(3) ---->MYB52(1) >>>>>>>>>>>>>>>>>LFY          <---------ZAT18 --------->YAB1           --------->TOE2(3) --At4g35610   <<<<<<<<<<<<<<<<<LFY     <---------ZAT14 <---------ATHB12<------------CBF    <--------   atgggcttgtatacaataaccagtgggcttttcataaacaagtttagtgagcttttcaatgaatagtaagggcttattgtaagtaaaaccctaatttcta  6000800                                                                            <------ZmHOX2a(2)                                                                           --------->ARR14(2)                                                                           <---------ARR11(3)                                                                           <---------ARR14(2)                                                                     <---------GLK1(1)                                                                     --------->GLK1(1)                                                                   <---------ICU4                                                                   --------->ATHB12                                     --------->YAB1               <---------YAB1                                --------->ZAT2                  --------->YAB1     --------->ANAC46         --------->ANAC58       <---------At4g35610    ---------->DOF2     --------->ARR11(3)         --------->ANAC46       --------->At4g35610 --------->YAB1--------->ICU4 <---------ALFIN1   - ---GT1  --------->ANAC58   ------>ZmHOX2a(1)  ------------>CBF--------->ICU4------>ZmHOX2a(2)  -----   tacactcttctacgctatcttccattcttcctccagctatcatatcaaaaacaatgagaaagaaaatgatgatttccgatcttccacacgatttggaatc  6000900                                                                                       <---------ANAC46                                                                               ------>ZmHOX2a(2)                                                                              --------->CCA1(2)                                                                              <------ZmHOX2a(2)                                                                             --------->ARR11(3)                  --------->LBD16                                            <---------ARR11(3)                  ------>NtERF2                                              --------->ARR14(2)                <---------LBD16                                              --------->AGP1              --------->ARR14(2)                                             <---------ARR14(2)       xxxxxxxxxxxxxxxx>smallRNA(s)                                         --------->GLK1(1)       < -------->GLK1(1)<---------ANAC46                                           <---------GLK1(1)    <--- ------>GT1   <---------ARR14(2)                 --------->AtLEC2 <----------DOF2--------->LBD16 ----   ggaaatactctctagggttccggcgaagtccctagcaaaatggaagactacttgcaaacgatggtatgctttattcagagatccgagtttcgtcaagaag  6001000             <------ZmHOX2a(1)          <-----------RAV1(2)       --------->DAG2      ---------->DOF2   --------->YAB1  <---------YAB1                                                                   --------->ZAT6 ----------DOF2           --------->YAB1                                          <---------TOE2(3) ------ARR11(3)          <---------YAB1        ----------->GT1                   <-----------GT1 ----->ARR11(3) <------ZmHOX2a(1) --------->ICU4                  --------->WOX13(1)            -----   aactttgataaagcaggaggaagggaaatgatagtactgatgaattctagggtttattcaaacagcgtcaatctccaagggattaacaatagatttgatc  6001100                                                <------NtERF2                <---------MYB46(3)                                         ---------->DOF2                     <---------DEAR3(2)                                   --------->ATHB12                       ------------>AtMYB77                                   -------->HAHB4--------->ETT(2)        ----------->HVH21       <---------MYB46(3)         <---------ATHB12                   <---------At5g28300          <--      <---------TOE2(3)    --------->ANAC58   --------->ALFIN1   <----------DOF2          <---------ZAT18 ->ZmHOX2a(2)              --------->ANAC58--------->DAG2  <---------At4g35610            --------->ZAT18   caagtatggaggttacaggtaaactcatcaagctaaatgattcaaaaggtgtcgatatttctgctatctttcactgcgacggtttgatattatgcactac  6001200                                                                                  --------->YAB1                                                                                  --------->ATHB12                                                                                  -------->HAHB4                                                                        <---------LBD16                                                                       <---------At5g28300          <---------ZAT18            --------->LBD16                  <-----------GT1          --------->ZAT14         ------->TEIL                    --------->AHL20(1)          <---------ZAT14       --------->ZAT14                   <---------ARR11(3)    --------->ANAC58            <---------ZAT14                   --------->ARR11(3)  <------MYB83    --------->ANAC58            --------->REM1(2)              <---------GLK1(2) --------->ICU4  ---------->DOF2             --------->LBD16                --------->LBD16     <---------YAB1 -------LBD16       <---------ANAC46 ----------->GT1------->TEIL  <---------AHL20(1)  <------MYB46(1)   gacggaaagcactggacttgtggtttggaacccgtgtaccggtgaaattagatgtatcaaacccagaatattttaccggtgtaatgataggtatgctctt  6001300              <-----------ARR10              <---------ARR14(2)              --------->ARR14(2)              <---------ARR11(1)              <---------ARR11(3)                                        --------->TOE2(3)              --------->ARR11(3)                                     --------->ARR14(2)             <---------CCA1(2)                                       <---------GLK1(2)              <             <---------ARR14(1)                     <-------GAMYB    <---------ARR14(2)            <-  <---------ANAC46                          <---------ARR11(3)<---------ETT(2)                     --  --------->ANAC58                  --------->ARR11(3)        --------->ETT(2)         <---------ZAT2  --------->ANAC58                  <---------ARR11(3)        --------->WRKY12         --------->At4g35610  <---------ANAC55(2)               --------->ARR14(3)        --------->WRKY38(1)      --------->ZAT2  <---------HSFB2a(2)               <---------ARR14(3)     <---------ANAC46            <---------At4g35610  --------->ANAC55(2)               --------->GLK1(2)<---------MYB52(1) --------->TOE1(3)          -- <---------LBD16             <----------ID1 --------->ARR11(3)--------->DEAR3(1)     <---------RAP2.6(2)   ggttacggaaacagcaaatcttcttgccatagctacaaaatcttgaggtcttgctgttattacgtcgaccagaacctcagcctcatggctgctgagtttg  6001400  Previous    Next  AGI:  At3g17530.1    Description:  F-box family protein. Identical to F-box/Kelch-repeat protein At3g17530 [Arabidopsis Thaliana] (GB:Q9LUP5;GB:Q0WN51); similar to F-box family protein [Arabidopsis thaliana] (TAIR:AT3G17540.1); similar to PpSFBB4-beta [Pyrus pyrifolia] (GB:BAF47182.1); contains InterPro domain Cyclin-like F-box (InterPro:IPR001810); contains InterPro domain F-box associated type 1 (InterPro:IPR006527); contains InterPro domain Galactose oxidase/kelch, beta-propeller (InterPro:IPR011043) Range:  from: 6000866    to: 6002288    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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