Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                       ------>ZmHOX2a(1)                                                               --------->TGA2(2)                                                              <-----------HVH21                                                              <-----------TGA1                                                             --------->ANAC58                                                             --------->ANAC55(1)                                                             --------->TGA1a                                                             --------->ANAC58                                                             <---------O2                                                             --------->O2                                                             --------->ANAC55(2)                                                             <---------TGA1a                                   ====================================bZIP_DOF                            --------->ANAC58      <---------ANAC46  --------->TOE1(3)        --------                            --------->ANAC58      <---------ANAC58  --------->TOE2(3)   ----------->GT1                         XXXXXXXXXXXXXXXXXXXX>MIR169G*       <---------ANAC55(2) ----------->RAV1(2) --------HVH21          ------>NtERF2        <----------DOF2 --------->ANAC46    --------->At4g35610 >P                    --------->LBD16       ==========================bZIP_DOF  <---------At4g35610 ->MYB52(1)            <---------ETT(1)     <---------ANAC58 --------->bZIP60(2) --------->ZAT2 >MYB52(1)             --------->ANAC46     <---------ANAC58<-----------STF1   <-----------RAV1(2) -ALFIN1        <---------ANAC58   --------->TOE2(3)       <---------ALFIN1 <---------WRKY18(1) ->HVH21        <---------ANAC58   <----------DOF2<---------ANAC58--------->ICU4 <---------ZAT2   gtccaagactcatcgttttcgtctcccgacaagctatctttaacttgctttgacttgtgagacacgtcatccttaacttgaccagctgagtcgtaactct  6000000                                                                                           ------->GAMYB                                                                                          --------->MYB46(3)                                                                                         ------>MYB46(1)                                                                                         ------>MYB83                                                                                         -------->P                                                                <---------ARR14(2) <------NtERF2                   --------->ANAC58                             ------->TEIL       --------->At4g35610                   --------->ANAC58                             --------->ARR14(2)<---------ATERF1(1)               <---------HSFB2a(2)                             <---------ARR14(2)<---------RAP2.6(2)          <----------DOF2                                     <---------SPL7    <---------LBD16    <---------ANAC58                           <---------At4g35610           <-----------HVH21    <---------ANAC58            ------>ZmHOX2a(1)        --------->SPL7      ------>ZmHOX2a(1)    <--  ------>NtERF2--------->HSFB2a(2)   <----------DOF2  <---------ANAC46<---------DAG2   <---------ALFIN1 ->ZAT6 ---------->ID1  <---------ALFIN1       --------->At4g35610    <----------DOF2------>NtERF2---   gcgaggccttgtcttttacagaagccaaaccctcctcaactttcgatttagctgtctcgtatgccgaacccgctttctccttcgcggctccaaccgcttc  6000100                      <----------DOF2                   ------>NtERF2                  --------->DEAR3(1)                 <------NtERF2                 --------->ATERF1(1)                 --------->RAP2.3(1)                                                        <------MYB83                ------>NtERF2                                                               <--------                <---------ATERF1(1)                                             <---------ANAC46               --------->DEAR3(1)                                               <---------ANAC58               --------->ANAC46                                                 <---------ANAC58               --------->RAP2.6(2)                                            <---------MYB46(3)             --------->At4g35610                                             --------->ALFIN1             <---------At4g35610                                             <---------AtMYB61       <---------ANAC58        ------>ZmHOX2a(1)                          --------->ALFIN1  <------MYB46(1)       <---------ANAC46   <---------ANAC58                              <---------ANAC58 <-------GAMYB       <---------ANAC58   <---------ANAC58                              <---------ANAC58 <---------ANAC46   <----------DOF2<---------ALFIN1                                      <---------MYB46(3)<--------P -------At4g35610--------->DEAR4(2) <---------DAG2                      <---------ANAC46<------MYB83 --->ZmHOX2a(1)--------->RAP2.3(2)  <----------DOF2           <------------------SPL14  <------MYB46(1)   ctctgctttgcgtttagccgcctcctttgcgtcctcggctttttgactcgctctccaagcgtcgtcttgaacggtcgtggtggtgtgagtgggttggatg  6000200                                                                                          <---------ALFIN1                                  --------->WOX13(1)                                    ----------->RAV1(1)                   <------ZmHOX2a(2)                                                 --------->ANAC46                  --------->ARR11(3)                                           <---------ANAC46                  --------->ARR14(2)                                           <---------ANAC58                  <---------ARR14(2)            <-------TEIL                   <---------ANAC58                  <-----------ARR10         <---------YAB1                    <---------ZAT2        <---------ANAC58       ----------------->AG   ===========================HOX2a_HOX2a        <---------ANAC58       ----------------->AGL1 ------>ZmHOX2a(1)       --------->ZAT2    <---------ANAC58       <----------DOF2  <---------ATHB12         ------>ZmHOX2a(1) --------->ANAC46    <---------ANAC58------>ZmHOX2a(2)<---------ICU4  --------->TOE2(3)       <---------TOE1(2) -MYB46(3)        <---------ARR11(3)<---------ATHB12 --------->TOE1(3)    ------>ZmHOX2a(2)   ttgtcttcgtgcttgagaccgatcttctcctttgcccaatcagtccatgattcatccttagccgcttcttcctcgatcgtagcttggacacaacacatcg  6000300                                       <---------ZAT14                                       --------->ZAT14                                   --------------->AtSPL8                                   --------------->AtSPL3                                 --------->MYB52(1)                                            ------                                 ------>MYB46(1)                                           <---------AHL20(2)                               <---------MYB59                                           <---------YAB1                               --------->AtMYB61                                        --------->AHL20(1)                     --------->ARR11(3)<---------ZAT18                                  --------->AHL20(2)                     <---------ARR11(3)--------->SPL7   ------->GAMYB                 <---------ARR11(3)                 ---------->DOF2 ------>MYB83         -------->P            *TSS      --------->AHL20(2)          <---------ICU4 --------->TOE2(3)      ------>ZmHOX2a(1)    --------->ZAT6   <---------AHL20(1)         --------->ICU4  --------->TOE1(3) <----------DOF2         <-----------GT1    --------->AHL20(1)   ttgcaatagccataagtaccaaagataccataaccaaaccgtacactttcctctctaaccccatttttgttacactaatcgaacacaaaatattatatgg  6000400                                                                                  <----------DOF2                                                                              <---------WOX13(1)                                                                           <---------YAB1                                                                         <---------ANAC46                                                                       <---------At4g35610                          ----------->GT1                          <---------AtMYB61                         >>>>>>>>>TBF1             <---------ANAC46--------->ALFIN1         ---------                     <---------At4g35610           <---------bZIP60(2) <---------ZAT14   <---------MYB52(1)                     --------->At4g35610    <---------At5g28300 <------ZmHOX2a(1)<---------ANAC58                   --------->HSFB2a(2)    <---------ZAT14    --------->LBD16--------->ATHB12<-------- ----->GT1         <---------HSFB2a(2)    --------->ZAT14    --------->HSFB2a(2) <---------ANAC58   ttatataacttatatcaagtttcagaagaagaaaaaaacctctgtttactgtgatgtgttctccgaggaatggtgctgtgattgcttctctgttatgtat  6000500                                     --------->ANAC55(2)                          ------->MYC3                         <---------ANAC58                         <---------ANAC46                         ==========================================bZIP_DOF                         <                         --------->O2<---------ANAC58                                               <                         <---------ANAC58           <---------GLK1(2)            <---------ZAT6     <                         <---------TGA1a  <---------ANAC46                     <---------ANAC58     -                         <---------O2<---------ANAC58                          <---------ANAC58     =                         --------->ALFIN1 <---------ANAC58                  <---------ARR14(2)      -                         --------->TGA1a  <---------ANAC58                  --------->ARR14(2)      -          --------->CCA1(2)          <---------ANAC55(2)      <---------ANAC58 <---------ANAC46     <     ---------->DOF2 <------ZmHOX2a(1)   <------NtERF2        <---------ANAC58<-------TEIL <---------ARR14(2)     ==============================bZIP_DOF        --------->ZAT2 --------->HSFB2a(2)    <---------MYB46(3) >ANAC55(2)   <------MYB83<-------MYC3 --------->ALFIN1 <----------DOF2     <---------GLK1(2)  ------ -ANAC55(2)   <------MYB46(1)       <-------TEIL   <---------ZAT2 <---------HSFB2a(2) <---------ANAC46   tagttgaaaaagagataggtttaggacgcgtggctaagtacgtggcgagtaccagcttcttttggcttctcgattttggattcgtgttaagtggttcttg  6000600           --------->ANAC58           --------->ANAC58           --------->ANAC46   <-----------HVH21 ------->MYC2 <-------MYC4 ------->MYC4 <-------MYC3                         <---------ANAC46 <-------MYC2                        <---------LBD16 ------->MYC3                   <----------DOF2 ---------O2                    <---------------AGL15 ---------ANAC55(2)             <---------DAG2 --------ABF1                  <---------ANAC58    --------->ANAC58 -------->O2                   <---------ANAC58 ------>MYB46(1) ==========================================bZIP_DOF--------->ANAC58 -------->ANAC55(2)        <------------CBF     ------>MYB83              <---------At4g35610 -------->TGA1a        --------->ANAC58      --------->DEAR3(2)           --------->At4g35610 ---------TGA1a        --------->ANAC58--------->LBD16                  --------->REM1(1)       ----- ----->HVH21  --------->MYB52(1)--------------->AGL15       ---------->DOF2 ------->GAMYB    <-------   acacgtgttacacaaacaacgaggcaagcgattgctttttgcggaaaaccgactcgcaaaaacaaagagaggcttcaactgaaacacatctgtgaagcta  6000700                                                      --------------->AGL15         ------------>CBF    --------->YAB1         ------------>CBF  <---------ANAC46       <----------DOF2         <----------DOF2  <---------ANAC58   <---------ZAT18           <---------At4g35610  <---------ANAC58  --------->ALFIN1         <---------ZAT18          <----------DOF2 --------->TOE2(3) ---->MYB52(1) <<<<<<<<<<<<<<<<<LFY          --------->ZAT18 --------->YAB1           --------->TOE1(3) --At4g35610   >>>>>>>>>>>>>>>>>LFY     <---------ZAT14 <---------ATHB12<------------CBF    <--------   atgggcttgtatacaataaccagtgggcttttcataaacaagtttagtgagcttttcaatgaatagtaagggcttattgtaagtaaaaccctaatttcta  6000800                                                                            <------ZmHOX2a(2)                                                                           <---------ARR14(2)                                                                           --------->ARR11(3)                                                                           <---------ARR11(3)                                                                     <---------GLK1(1)                                                                     --------->GLK1(1)                                                                   --------->ATHB12                                                                   <---------ICU4                                     --------->YAB1               --------->ICU4                                --------->ZAT2                  --------->YAB1     --------->ANAC46         --------->ANAC58       <---------At4g35610    ---------->DOF2     --------->ARR14(2)         --------->ANAC46       --------->At4g35610 --------->YAB1<---------YAB1 <---------ALFIN1   - ---GT1  --------->ANAC58   ------>ZmHOX2a(1)  ------------>CBF--------->ICU4------>ZmHOX2a(2)  -----   tacactcttctacgctatcttccattcttcctccagctatcatatcaaaaacaatgagaaagaaaatgatgatttccgatcttccacacgatttggaatc  6000900  Previous    Next  AGI:  At3g17520.1    Description:  late embryogenesis abundant domain-containing protein / LEA domain-containing protein. contains domain LATE EMBRYOGENESIS ABUNDANT (LEA) (PTHR23241:SF11); contains domain LATE EMBRYOGENESIS ABUNDANT (PLANTS) LEA-RELATED (PTHR23241) Range:  from: 5999295    to: 6000376    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At3g17530.1    Description:  F-box family protein. Identical to F-box/Kelch-repeat protein At3g17530 [Arabidopsis Thaliana] (GB:Q9LUP5;GB:Q0WN51); similar to F-box family protein [Arabidopsis thaliana] (TAIR:AT3G17540.1); similar to PpSFBB4-beta [Pyrus pyrifolia] (GB:BAF47182.1); contains InterPro domain Cyclin-like F-box (InterPro:IPR001810); contains InterPro domain F-box associated type 1 (InterPro:IPR006527); contains InterPro domain Galactose oxidase/kelch, beta-propeller (InterPro:IPR011043) Range:  from: 6000866    to: 6002288    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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