Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                ------>NtERF2                              ----------->RAV1(1)                              <---------RAP2.6(3)                             --------->At1g77200                             <---------ETT(2)                        ----------->GT1                             --------->RAP2.6(2)                    --------->DAG2                             <---------ETT(1)                     ---------->DOF2                             <---------ATERF1(2)             ----------->GT1                        <                             --------->ATERF1(2)        <---------AHL20(2)                        <--                           <---------At4g35610         <---------ATHB12                      <-------                      ----------->HVH21                --------->AHL20(2)                   ---------                    --------->ANAC55(2)     ----------->GT1 --------->YAB1               --------->AHL20(2)                    <---------ANAC55(2) --------->ATHB12--------->AHL20(2)               --------->YAB1           <---------ATHB12--------->At4g35610       --------->WOX13(1)                 <---------ATHB51   aagttgacaacaaatcaacaatatgtgactgccgacacaaattgattagtaataccaattaataagaaaaaaggtagaatacgaccttcaattataaaat  5965500                                        --------->YAB1                                      <---------AHL20(2)                                      --------->AHL20(2)                                      --------->AHL20(1)                                     --------->YAB1                                     <---------ICU4                                    <---------YAB1                                 --------->AHL20(1)                                <-----------GT1                                 --------->AHL20(2)                           <---------AHL20(2) --------P                       <---------AHL20(1)       ------>ZmHOX2a(1)   --------->AHL20(1) -------MYB46(3)                 <---------AHL20(2)   --------->ARR14(2)      <---------AHL20(1) --AHL20(2)                --------->TOE2(3)<-----------GT1                 <---------YAB1 >AHL20(2)               <---------YAB1<---------YAB1 <---------ARR14(2)   --------->AHL20(2)     <--   tggttagtatatcacattcacttagttattcttaattaattataataaacctctcaaatcctcacgtttagaaacaatattatattcacgatttagagct  5965600                                                    <-----------GT1                                                  <-----------GT1                               <---------ICU4 <---------ARR11(3)                              <---------YAB1  --------->ARR14(2)                              --------->ICU4  --------->ARR11(3)          <--------HAHB4    --------->YAB1    <---------GLK1(2)                  --------->ANAC46          --------->YAB1   <---------YAB1     <---------ARR14(2)               <-----------GT1          <---------ICU4 <---------CCA1(2)  <---------TOE2(2)             <---------YAB1        -----      ----------->GT1  --------->YAB1       <---------TOE1(2)          <---------YAB1           <---- ---------GT1    --------->ANAC46     <---------CCA1(2)              <----------DOF2--------->YAB1 <<   taaccatatcgataattacacacactcatatcattatcgcatatcgcagatttttctctcttcaaaattagctttgattattcacatcataaacaggcct  5965700                                                                                 --------->LBD16                                                                        <-----------ARR10                          ----------->GT1                               <---------ARR14(2)                       --------->DAG2                                   --------->ARR11(3)              -------->ZAP1                                             <---------ARR11(3)            <---------WRKY18(1)                                         --------->ARR14(2) ---->HSFB2a(2)    --------->YAB1                  <---------ATHB12   <---------TOE2(2) -----HSFB2a(2)  ----------->RAV1(1)       --------->DAG2             <---------TOE1(2)             - <<<<<ZML2 ----------->HVH21              ---------->DOF2   --------->ZAT6     <---------LBD16     --   agaacaaagtctcttgacccagcataaggtgttatataggcccataaagcccaatctttctaactctcttcgcaggtcttctccgcatacaagagataaa  5965800                                                             <------------CBF                                                           <---------AHL20(2)                                                          <---------AHL20(1)                                                      --------->AHL20(2)                                                      <---------AHL20(2)                                                     --------->AHL20(2)                          <---                                                     <---------AHL20(1)                     <--------                        <---------YAB1               <---------AHL20(2)                   --------->TOE2(3)                      <---------At4g35610       <---------MYB52(1)                      <---------AHL20(1)                  --------->ARR14(2)            ------------>CBF                        --------->AHL20(1)              <-----------RAV1(2)              <-----------HVH21                        --------->AHL20(2)             <-------TEIL                     --------->DEAR3(1)                        <---------ARR11(3)       <---------MYB52(1)                     --------->DREB2C(2)        <-----------RAV1(2)---------      <---------RAP2.6(3)--------->ATHB12  <---------ALFIN1--------->AHL20(2)--------->ARR14(2) ----- -------->LBD16<---------TOE1(3)       <---------At4g35610--------->AHL20(2) <---------ARR14(2) <---- ------->ANAC46<---------TOE2(3)       --------->At4g35610<---------AHL20(2)<------ZmHOX2a(1)   <----   cccgtagccgttagattcaggttttgctgattagcttattcatctccaccgtcaatttaatttaattgttttggttcaggaactggacaaaatattaatt  5965900                                                                                                  <--      <---------ARR11(3)                                                                          <-- ------AHL20(2)                                          --------->ARR14(2)      --------->ARR11(3) -AHL20(2)                                    --------->STY1(2)                  <---------ARR11(3) >AHL20(2)                   *TSS         --------->STY1(2)                   --------->AHL20(2)----- ---->AHL20(2)               <---------MYB52(2)          --------->AGP1    --------->YAB1  <<<<<<<<<TBF1 -----AHL20(2)          --------->HSFB2a(2)   <---------STY1(2)    <----------DOF2      <<<<<<<<<TBF1 -----AHL20(1)     <<<<<<<<<TBF1          <---------STY1(2)  <---------TOE1(2)<---------AHL20(2)<----   aatttcaagttctaatctttcttcttctccaactaaactactgtagctagctatctccagttctacgttctttctattaataaaatcttcttcttcttct  5966000     <--------P                                       --------->GLK1(2)     <---------WOX13(1)                     <---------CCA1(2)    <-------GAMYB                --------->ARR14(2)  --------->ARR14(2)   <---------MYB46(3)            <---------ARR14(2)  <---------GLK1(2) -------DAG2                  --------->ANAC58       <---------ARR14(2)                         ===== --------DOF2--------->ANAC46 --------->ANAC58 --------->YAB1                                   ----- ---------->AGL15     ------->TEIL       <------NtERF2--------->ARR14(2)       <---------AHL20(2) -----------AGL15    <-----------GT1   <---------DEAR3(1)          --------->At4g35610    <---------ZAT6   ctttttggttgattcccaccattgaacctctcacgaattcgtcgtcgtatcatcagattctgctcgaatagctgaatttgtttaatcagatagtgttcct  5966100                                                                       ------>ZmHOX2a(2)                              --------->MYB52(2)                     <---------ARR11(3)                            <---------MYB52(1)                       --------->ARR11(3)                          <---------ANAC58                         <---------YAB1   ------>ZmHOX2a(2)      <---------ANAC58             <---------ARR14(2) <---------ARR11(3)<-----------RAV1(1)                 --------->ARR14(2) =========HOX2a_HOX2a   <---------ANAC46<---------At4g35610   <---------At4g35610 ->ZmHOX2a(1)   <---------GLK1(2)    <----------DOF2   <---------GLK1(2)   cttgatctatcgctactagatttgttgtgcgtttgttttctttgctgataatttgcaaattctctgcttatgatctcgaggtagtaatgtctgttcttct  5966200                                          ------>ZmHOX2a(2)                                     ------>ZmHOX2a(2)                                    <---------At4g35610                                    <------ZmHOX2a(2)                                         <------                                   <-----------ARR10                                         ------->TEIL                                   --------->ARR14(2)                                        <-------                                   <---------ARR14(2)                                        --------                                   <---------AGP1                                     ------>ZmHOX2a(1)                                  <---------CCA1(2)                    ------>ZmHOX2a(2)     <-------                              --------->MYB52(1)                     --------->ARR11(3)     <--------                            <----------DOF2                          <---------ARR11(3)<---------ZAT2                           <---------ANAC46                      ------>ZmHOX2a(2)<-----------GT1                           <---------ANAC58                      ============================HOX2a_HOX2a                  <-----------GT1 <---------ARR14(1)         ----------->HVH21  <---------AHL20(2)  <---------MYB52(1)       <---------ANAC58            <----------DOF2 ======================HOX2a_HOX2a   ctcccttattgttcattttttaactcgttgcttatcggatctgatccatttcgctctctttctctgatcgtgatctctcgattttatcctgctcgtatct  5966300                                                                       --------->AHL20(2)                                                                       <---------AHL20(2) <---------ANAC58      <-----------GT1                                       <------MYB46(1)               <---------ANAC58    <---------AHL20(2)                                      <------MYB83             <--------HAHB4 ---CCA1(2)                                                <---------TOE1(2)         --------->ATHB12 --ARR14(2)                                                <---------TOE2(2)         <---------ICU4 ->ARR14(2)    <---------YAB1                           <---------ANAC46            <---------YAB1<-- --ARR11(1)  <---------------AGL15                      <---------ANAC58            --------->ICU4--- -CCA1(2) ------>ZmHOX2a(1)                             <---------ANAC58          --------->bZIP60(1)   ctcgattttatcctgctcttattggtggatttttggttttggaggtttagatttcatgtcgtaggttttggattttattttctggcatcattacttggtg  5966400  Previous    Next  AGI:  At3g17430.1    Description:  phosphate translocator-related. similar to phosphate translocator-related [Arabidopsis thaliana] (TAIR:AT1G48230.1); similar to unknown [Populus trichocarpa] (GB:ABK94812.1); contains InterPro domain Protein of unknown function DUF250 (InterPro:IPR004853) Range:  from: 5965929    to: 5969239    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
	printer-friendly version