Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                            <-----------GT1                                           <----------DOF2       <---------YAB1   <---------ANAC58                                      ------->TEIL <---------DAG2         <---------ANAC58                            <---------AHL20(2) <----------DOF2  <---------TOE2(3)              <---------MYB46(3)--------->AHL20(2)               < --------->AtSPL8 <---------TOE1(3)<----------DOF2    <-----------GT1        <---------CCA1(2)      -   gtactttttcttatagtttttaggtttcttactctctcttttagagaatgtttgttctaccctctaatatttaatagttgtatctactttagatttgtct  5933700                                                                                --------->AHL20(2)                                                                             --------->YAB1          --------->ARR11(3)                                              <---------GLK1(1)      ----     --------->AHL20(2)                                                  --------->ARR11(3)      ---- ---------AHL20(2)              <---------WOX13(1)        <---------AHL20(2)<---------YAB1       <--- -------->AHL20(2)        --------->MYB52(1)           ------->TEIL      <---------ARR11(3) <<<<<<<ZML2   atataaatgaaatatgttgatgaacaaaaaacagattgatgaattagtagacaaatgtatatatatgatgtaatagatatcataaaatccactagaacgt  5933800                                                                                    <----------ID1                                                                                    ----------->GT1             <---------PCF2                                                        <---------TOE2(3)             <---------ANAC46                                                    ---------->DOF2        --------->ALFIN1                                                        <---------AHL20(2)        <-----------RAV1(1)                                                     --------->AHL20(2)    --------->YAB1                                                          --------->AHL20(2)   <---------ATHB51                   <---------------AGL15                 <---------AHL20(2)   <---------ATHB12                   --------------->AGL15  <-----------GT1<---------AHL20(1) --->TEIL --------->ALFIN1     <---------AHL20(1)    <---------ARR11(3)     --------->AHL20(1) ----->ARR14(2)                <---------AHL20(2)    --------->ARR11(3)    <---------AHL20(2) ------ARR14(2)   --------->YAB1<---------YAB1   ---------->DOF2           --------->AHL20(2)   <----   atccaataatgtgtggggcataataacatgtattatttttctattaacagaaaaagatgtttttgactatttgacaaataaattaaaggaaaaaaatcac  5933900                                                                                               <-----                                                                                               ------                                                                                               ------                                                                                               <-----                                                                                            ---------                                                 --------->ARR11(3)                      --------->YAB1                                                 <---------ARR11(3)                      <------ZmHOX2a(1)       --------->ANAC46---------->DOF2 --------->AHL20(2)                              <---------TOE1(3)      <-------TEIL---------->DOF2      <---------AHL20(2)                         <---------YAB1 -----ANAC55(2) <---------ATHB12      --------->AHL20(2)               <-------TEIL    <---------TOE2(3)   ttaaaaaatacatcacaaatcaaaggaaagtagaagaaaaaaaaatttcaagataatattccatatttatgcatacataaaactatgtttaggataataa  5934000                                         --------->AHL20(2)                                  <---------AHL20(2)                                 --------->AHL20(2)                            <---------AHL20(1)            --------->TOE2(3)--------->AHL20(2)            --------->TOE1(3)<---------AHL20(2) ----AHL20(1)               <---------AHL20(2) --->AHL20(1)               --------->AHL20(2) --->AHL20(2)       ----------->GT1      <---------AHL20(2)    <---------ZAT6                       *TSS ----AHL20(2)  --------->MYB52(1)<---------AHL20(2) ---------->DOF2        ---------->DOF2         -- >YAB1 --------->YAB1   <---------AHL20(2)       --------->TOE2(3)   ---------->DOF2       <------ZmHOX2a(1)   attaacaaataataccataacgaggtttaatttaatttaaaatttaaatttccataaacccattagagatagaaagggaaagagagatttacaggaagag  5934100                                                                                              -------                                                                                       --------->TOE1(3)                                                                                       --------->TOE2(3)                                                                                     -------->P -----                                                                           ------>NtERF2     --------                                                               --------->TOE1(3)    ------->GAMYB ---                                                               ------->GAMYB       --------->MYB46(3)                                                         --------->YAB1    --------->LBD16 --------->ZAT2                                                   --------->ANAC46       --------->ANAC46 <---------ZAT2                      --------->ARR11(3)          --------->ZAT14        <---------LBD16   <---------At4g35610                      <---------ARR11(3)          <---------ZAT14      <---------ARR14(2)  --------->At4g35610            --------->YAB1   <<<<<<<<<TBF1 ------>ZmHOX2a(1)   --------->TOE2(3)   <---------MYB111(2) ----------->GT1    ------->TEIL   <<<<<<<<<TBF1  <---------REM1(2)    --------->ARR14(2)---------->CDC5 -------->DOF2----------->TGA1  <<<<<<<<<TBF1  ------>ZmHOX2a(1)      <---------GLK1(1)--------->AtMYB61   ataaagaaaaacaacaatgacgaagctcttcttcttcttcttctccttcctctacacaatcacaaccctaacatttccgccattaacaacctcagcagca  5934200                                                                  <---------GLK1(1)                                                                  <------ZmHOX2a(2)                                                                  =======================HOX2a_HOX2a                                                                  --------->GLK1(1)                                                                 <---------ARR14(3)                                                                 <---------ARR14(2)                                                                 --------->ARR14(3)                                                                 --------->ARR11(3)                                                                 <---------ARR11(3)                                                                 --------->ARR14(2)                                                                 <-----------ARR10                                                                 <---------AGP1                                                                <---------CCA1(2)                                                                <---------ARR14(1)                                                               --------->LBD16                                                              <---------ANAC58                                                              <---------ANAC58                                                              <---------ANAC46                                                          --------->ATERF1(1)                                                          <-------GAMYB                                                         --------->MYB55(2)                                                         <---------ATERF1(1)                                                         <---------DEAR3(2)                                                        <---------DEAR3(1)                                                      ------------>AtMYB77                                                      ------>NtERF2------>ZmHOX2a(2)                                                      <---------RAP2.3(1)                                                      <---------ERF1                                                      <---------RRTF1(1)                                                     <---------RAP2.3(3)                                           --------->SPL7<---------MYB46(3)          --------->KAN4(1)                       <---------ALFIN1   --------->ARR14(2)  --------->ANAC55(2)    <---------HSFB2a(1)                     ----------->RAV1(1)  <---------MYB52(1) <---------LBD16        <---------KAN4(2) <---------ICU4    <------NtERF2--------->AHL20(2)   <---------RAP2.3(2)          <------ZmHOX2a(1) -->At4g35610     --------->LBD16    -------->P      <---------DEAR3(1)------>ZmHOX2a(1) ------>RAV1(1)  <---------RAP2.6(2) --------->MYB52(1)<------NtERF2  --------->TOE2(3)           <-- ->RAP2.6(2)     --------->ANAC46<-----------GT1  ----------->HVH21======================HOX2a_HOX2a ------>REM1(1) <---------LBD16<---------ATHB12  <------NtERF2<---------ANAC55(2) ===================   acatcatgccgaacattatgcggcaacatcccaataaactacccgttcggcatcgacggcggttgcggatctcctcaatacagaggaatgttcaattgct  5934300                              <---------At4g35610                              --------->At4g35610                           <---------MYB52(1)                          --------->LBD16                          ------>NtERF2                         <---------ATERF1(2)                         --------->ATERF1(2)                         --------->HSFB2a(2)                         <---------HSFB2a(2)                        <---------LBD16                --------->AtMYB61   <---------------AtSPL8             <-----------GT1  <------NtERF2    <------ZmHOX2a(2)   --------->RAP2.6(3)    =========================HOX2a_HOX2a                --------->HSFB2a(2)          ------>ZmHOX2a(1) --------->DEAR3(1)     --------->SPL7                  <---------HSFB2a(2)       <------ZmHOX2a(2) -------ALFIN1  <---------ALFIN1<----------DOF2        <---------ANAC55(2)       <---------ARR14(2) ==========HOX2a_HOX2a------>ZmHOX2a(1)   ---------->DOF2             --------->YAB1--------->TOE1(2)   ccaccgatctatatttcaccactccttccggcagctataaggtccaaagcatcgattacgagaagaaaacaatggtaatcttcgatcctgctatgtctac  5934400                                       --------->GLK1(1)                                      <---------KAN4(2)                      <---------MYB52(1)                                      --------->ARR11(3)                 ------>NtERF2                                      --------->ARR14(2)                <---------ALFIN1                                      <---------ARR11(3)             --------->ANAC46                                      <---------ARR14(2)             --------->ANAC58                                     <------NtERF2                   --------->ANAC58       <--------                                    --------->LBD16                  ----------->HVH21     <---------                                   <---------ANAC58               <---------SPL7      <---------DAG2                                   <---------ANAC58               --------->TOE1(2)   <----------DOF2                                   <---------ANAC46         --------->ARR11(3)<---------ARR14(2)                                  <---------LBD16           <---------ARR11(3)--------->ARR14(2)   --    <---------GLK1(2)         <---------ICU4         <---------YAB1 --------->SPL7  <---------TOE1(2)   ttgctcgattcttcagcctcaccacgatttcaaaatggcggatattcaaaacactcttattagaccttcgtacgacaccgttttcgcacttttcaactgt  5934500                                                      <---------ALFIN1                                                    --------->ATERF1(1)                                                    <------NtERF2                                                   --------->ANAC58                                                   <---------ATERF1(1)                                                   --------->ANAC46                                                   ------>NtERF2                                                   --------->ORA47(1)                                                   --------->ANAC58                                                  <---------ATERF1(2)                                                  --------->RAP2.6(2)                                                  --------->ATERF1(2)                                                  --------->DEAR3(1)                                                 <------NtERF2                                                 --------->ATERF1(1)                                                 --------->ORA47(2)                                                 --------->DEAR4(2)                          <---------LBD16        --------->RAP2.3(1)                         <---------DOF5.7(2)    ------>NtERF2                                   <----                         --------->MYB52(1)     <---------ATERF1(1)                             -----                       --------->DOF5.7(2)     <---------ATERF1(2)                              <----               --------->YAB1  --------->GLK1(2)<---------RAP2.3(1)                            <-----    <---------GLK1(2)<---------ICU4            --------->DEAR3(1)                              <-----  <---------ATHB12   --------->YAB1           <---------RAP2.6(2)                   ------->TEIL----- -At4g35610------>ZmHOX2a(1)  <---------GLK1(2)--------->ATERF1(2)               ------>ZmHOX2a(1) --GT1   ----------->RAV1(2)--------->LBD16 <-----------RAV1(1)                ----------->RAV1(2) ------->TOE1(2)  <---------ICU4        <---------AHL20(2)            <----------DOF2     <----------DOF2   tccaacgattctcctgttcataatcgttaccggaatctatgttttaatgccgccggccactcttgcgacgagctttatagctcctgtacttcctttcgaa  5934600  Previous    Next  AGI:  At3g17350.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G50290.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO70913.1); contains domain PROKAR_LIPOPROTEIN (PS51257) Range:  from: 5934100    to: 5935042    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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