Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                      --------------->AGL15                                    <---------------AGL15                                   <-----------------AGL2                                   <-----------------AGL1             --------->RAP2.6(2)                                  <---------ZAT18                   <---------At4g35610                                  <---------ZAT14                   <---------ZAT2                                  --------->ZAT14                   --------->ZAT2           <-------                         <---------ANAC58                  --------->CCA1(2)       <---------ANAC58                         <---------ANAC58  ----------->GT1<---------ARR14(2)       <---------ANAC58                       --------->ZAT14    --------->HSFB2a(2)       --------->At4g35610 <---------GLK1(2) --------->At4g35610   <---------ZAT14<----------DOF2     --------->ARR14(2)<----------DOF2<--------- --------->ZAT2       <-----------HVH21   <---------HSFB2a(2)<-----------RAV1(1)   <---------ANAC46 -   ccttgctgacttctgagattgtcccttcagtgccagtgctctttctggtaaaattcttcagatatgttgcagcagcaactttcaggcttggattttcact  5926500                                                --------->ANAC58                                                --------->ANAC58                                                --------->ANAC46                                               ------>MYB46(1)                                               ------>MYB83                                              --------->MYB52(1)                                             --------->AtMYB61                                             --------->TOE2(2)              --------->AHL20(1)             ------->GAMYB              <---------AHL20(1)            --------->MYB46(3)              --------->ARR11(3)            <---------MYB52(2)            <---------AHL20(1)              <---------MYB55(2)            --------->AHL20(1)             --------->ANAC58           --------->AHL20(2)              --------->ANAC58                        --------->YAB1   <<<<<<<<<WRKY18                  --------->ZAT14   --------->TOE1(3)         --------->GLK1(1) <-----------HVH21                  <---------ZAT14   --------->TOE2(3)         <---------GLK1(1) ----GT1 --------->AHL20(2)    <---------At5g28300   --------->ZAT6         --------->ANAC58 --GT1 --------->AHL20(2)<---------YAB1   --------->WOX13(1)                --------->ANAC58 ----->ZmHOX2a(1)  <---------AHL20(2)    <---------WRKY12             --------->LBD16        <-------   tcctgtcaaaaaaatatatattgaattagcattaactgtgaagtcaaccaacgtaaccctaattgttccatccggttcaaggaaatcaaaatcgcatctc  5926600                                                                                          --------->LBD16                                                                                         <---------HSFB2a(2)                                     <---------ANAC55(2)                                 --------->HSFB2a(2)                         ----------->GT1           --------->ICU4                       <---------LBD16                        --------->DAG2        ----------->GT1     ------->GAMYB        --------->MYB52(1)                       ---------->DOF2 --------->AHL20(2)       --------->ANAC58       -------->P --CCA1(2)      <---------LBD16      ----------->GT1            --------->ANAC58---------->DOF2   ttcaccagaagtcaatgcttcggaataaagtgaattgataagtaaatcgggtaaaaatgagaagacaacccaaacaaaacaaaaaagcttaccggaagcg  5926700                                                             <------NtERF2                                                             --------->ATERF1(1)                                             <------ZmHOX2a(2)                                            --------->AGP1  ------>NtERF2   --------->ANAC46                                   --------->ETT(2)        <---------DEAR3(1)                                <---------ANAC46           --------->DEAR3(1)                               <-------TEIL --------->ARR11(3)              --------->ANAC58                            <---------HSFC1(2)           <---------ATERF1(1)--------->ANAC58                            --------->HSFC1(2)           <-----------HVH21---------->DOF2                            <---------HSFB2a(1)         --------->ANAC46 <---------ARR14(2)                            <---------At4g35610      --------->DEAR3(1)  --------->ARR14(2)                            <---------ZAT2  --------->ARR14(2)     ----------->HVH21                            --------->ZAT2  <---------ARR14(2)   <---------LBD16                            --------->At4g35610   <---------ARR14(2)     <---------GLK1(2)              --------->DAG2--------->HSFB2a(1)   --------->ARR14(2)------>NtERF2<---------ATHB12   atggagagaagacgataagggaaatgagggagcttcgtagacagtagatccagagcctccgtcgcctcgcggacagaaacgccatcaatagaagtaagcg  5926800                                              --------->HSFB2a(1)                                         <------NtERF2                                        ------>NtERF2                                       --------->At1g77200                                       --------->DEAR3(1)                                      --------->ATERF1(1)                                      <------NtERF2                                      --------->DEAR3(2)                                      --------->RAP2.3(1)                                     <---------ATERF1(1)                                     ------>NtERF2                                     <---------RAP2.3(1)                                    <---------DEAR3(1)                                    --------->DEAR3(1)            <---------YAB1                                   <------NtERF2   <---------ANAC46      <---------DAG2                                   --------->ATERF1(1)         <-----------GT1                   --------->YAB1 <-----------HVH21<---------ANAC58      <----------DOF2                 --------->GLK1(2)<---------ATERF1(1)    <----------DOF2<---------ANAC58           --------->RAP2.6(2)   <---------DEAR3(1)<---------ANAC58     <---------ANAC58         <---  --------->WRKY18(1)           <------NtERF2------->TEIL<------------------------ANAC81         <---   tctggtcaagaagccgaacaatctgaactgagtcgtcgtcgccgacgaacattgcgtttcttttttttcttattgctttttcattttcttccctccaaac  5926900                                                                 --------->ANAC58                                               <---------TOE1(3) <---------ANAC55(2)                                               <---------TOE2(3) --------->ANAC55(2)                                          <--------ATHB1         --------->ANAC58                                         --------->ICU4         <---------LBD16                                     <------NtERF2         <---------AHL20(1)                                    --------->LBD16        --------->AHL20(1)                                   <---------ANAC58     <-----------TBP      <-----------GT1              <---------ANAC58     --------->AHL20(2)  <---------AHL20(2)   *TSS  --------->ATHB12 <-----------RAV1(2)--------->ANAC46 <---------AHL20(2) <---------LBD16<---------ANAC46   <---------DAG2 ------DAG2      >>>>>>>>>SARD1   <---------LBD16     --------------->AGL15                ---------- -------DOF2     >>>>>>>>>CBP60g--------->ALFIN1      <----------DOF2         --------->AHL20(2)   ttttttatttactgatgaaatttggggaacatcagtggcgggaataattcaggttactttatatattacggaagaatgaataaaaaacaagtctggttga  5927000                      <---------ANAC58         <---------ANAC58                      <---------ANAC58         <---------ANAC58                             ---------                  --------->CCA1(2)        --------->CCA1(2)                               ----------                 <---------ARR14(2)       <---------ARR14(2)                            --------->YAB1                 --------->ARR11(1)       --------->ARR14(2)                           <---------ZAT6                 --------->ARR14(2)       --------->ARR11(3)                       --------->ZAT14                 --------->ARR11(3)       --------->ARR11(1) <-----------GT1       <---------ZAT14 ->GT1         ----------->ARR10        ----------->ARR10  --------->AHL20(2)<-----------RAV1(1)  ---   atttcgaagactttgaaaagatttgggttcgaagactttgaaaagatttgggttcgaagaatttaacaattagtttgtactgttgtatactgataaagct  5927100                                                                                 <---------MYB46(3)                                                                              <---------ANAC58                                                                              <---------ANAC58                                                                        --------->ATHB12                                                                       <---------YAB1                                                                      --------->ARR11(3)                                                                     --------->YAB1              ----                                                                     <---------ICU4    <---------GLK1(2)                                                                     -------->HAHB4  ----------->ARR10                         --------->ARR14(2)                        <---------TOE2(3) --------->MYB52(2) >DAG2                   <---------ARR14(2)        --------->TOE2(3)--------->ICU4 <---------MYB52(1) >DOF2              <---------ANAC46     ------->GAMYB  --------->ICU4<---------ARR11(3)      <------ ------->DOF2   <----------DOF2       <-----------GT1  <---------TOE2(3)<---------ICU4<---------At4g35610   aaaagtttggagactagactttgagggtatttggcaaatttaaccccaaaaaaacttaatgtttagtttaatgatcattgtcttggttagcttctctaca  5927200                                                                             <-----------GT1          <---------AHL20(2)                                              --------->ATHB51         --------->AHL20(2)                <---------AHL20(2)             <---------ICU4         <---------AHL20(2)                <---------AHL20(1)             <--------HAHB4        <----     --------->ICU4                       --------->AHL20(2)             <---------YAB1        <-----   ----------->GT1                 --------->YAB1                 <-----------GT1              <----- ----->ANAC46                     <---------YAB1     <---------ZAT6      --------->ICU4  ----------->GT1 ---REM1(2)             --------->At4g35610--------->AHL20(1)    <---------YAB1       <---------ATHB12   cgatgtagttattaaatggttgtattagcttagtttatcatacattatattcgtagtgatatatgttatcacagcattattaccacctatgatgtaaatt  5927300                                                         <----------DOF2                                  <----------DOF2     --------->ARR11(3)                                  ------>ZmHOX2a(1)   <---------ARR11(3)                                  =============================HOX2a_HOX2a                           ---------->DOF2     <------MYB46(1)                  <-----------RAV1(1)     <---------ICU4       <---------AHL20(2)   <------MYB83                 --------->AHL20(2) -----ICU4            <---------AHL20(2)      --------->MYB59      <---------ZAT18 ----AHL20(2)         --------->AHL20(2)    <---------MYB52(1)     <---------ETT(2)    ----------->HVH21 ----ATHB51          --------->AHL20(2)   <---------ZAT6------>ZmHOX2a(2) --------->AHL20(2)       <-   attccaacaattacgttgtctcatttatttaaagtccttttctattgttaggttttgatcttttctctgtggacaaaaatatatgttgtatgacatctct  5927400  Previous    Next  AGI:  At3g17340.1    Description:  protein transporter. similar to protein transporter [Arabidopsis thaliana] (TAIR:AT3G59020.2); similar to protein transporter [Arabidopsis thaliana] (TAIR:AT3G59020.1); similar to hypothetical protein OsI_035816 [Oryza sativa (indica cultivar-group)] (GB:EAY81857.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO70910.1); similar to expressed protein [Oryza sativa (japonica cultivar-group)] (GB:ABA95547.1); contains InterPro domain Armadillo-type fold; (InterPro:IPR016024); contains InterPro domain Importin-beta, N-terminal; (InterPro:IPR001494) Range:  from: 5920405    to: 5926923    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
	printer-friendly version