Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                             ----------->HVH21                                                                           ------>ZmHOX2a(1)                                                                           --------->LBD16                                                                          <---------------AGL15                        --------->At4g35610                               --------------->AGL15                   --------->MYB59                                       <-----------------AG------->GAMYB                   --------->MYB46(2)                                    ----------------->AGL2                <-----------HVH21                                        <-----------------AGL1               <---------ZAT6                                 ------>ZmHOX2a(1)              --------           ------>ZmHOX2a(1)                              <---------ARR14(2)           --------->YAB1       <---------ARR11(3)                                 --------->ARR14(2)     ----------->GT1       --------->ARR14(2)                           --------->TOE2(3)    ----------------->AGL1       <---------ARR14(2)             --------->ARR11(3)  <---------ARR11(3)    ----------->GT1   --------->YAB1<---------MYB52(1)   <---------ARR11(3)  --------->ARR11(3) ---------->DOF2---------   cttcatcaaaatcctcactgttaggcagtagaagagtagagaccttgttctcaatctcaaaatcctgaacagcgttcctgaaagggtaaacataaccatc  5897400                                            <----------DOF2                                          ------>ZmHOX2a(2)                                         <------ZmHOX2a(2)                                        --------->ARR11(3)                                        <---------ARR11(3)                                        <---------ARR14(2)                                        --------->ARR14(2)                                        <---------GLK1(2)                                       -----                                        --------->ARR14(3)                                      <----                             <---------REM1(1)                                                 ------                       <---------ZAT6   <---------ARR14(3)                                     <-----               <-----------HVH21      ----------->ARR10                --------->ANAC46     ---------             ====================================HOX2a_HOX2a     --------->YAB1             ---------             ------>ZmHOX2a(1)--------->ZAT14        <---------At4g35610                    --------- ->YAB1      --------->LBD16 <---------ZAT6 ------>ZmHOX2a(1)   <---------YAB1     --------->WRKY18(1) >MYB46(3)   ===================================HOX2a_HOX2a   --------->YAB1   --------->At4g35610  -   atccataggtatttcctggtcagtagtgttagtgtaggccaagatccttttcttcatcttccagttatcatcgacgaaatgagcagtcaaacagacgaaa  5897500   --------->ANAC58   --------->AtLEC2                     --------->ANAC46   --------->ANAC58                     --------->ANAC58 ---->ARR14(2)                          --------->ANAC58 -----ARR14(2)                         <---------ALFIN1 --->GLK1(1)                         <---------ALFIN1 ----GLK1(1)                       --------->DEAR3(1)           --------->YAB1 >ANAC46                   --------->TCP16(1)          --------->HSFB2a(1)            ------>ZmHOX2a(1) >ANAC58                   --------->PCF5              <---------HSFC1(2)    <---------AHL20(2) >ANAC58                   <---------PCF2              <---------HSFB2a(1)<XXXXXXXXXXXXXXXXXXXXXMIR402 ----->ZmHOX2a(1)     <-----------RAV1(1)              --------->HSFC1(2)----------->GT1   tcctcatgcaaaacagggcctcttatgtggtccctagccccccagccattaccaagaagcatccattcataagagaggtttaattgtccttgaaaactct  5897600                                     ------>ZmHOX2a(2)                                   <---------ARR14(2)                                   <---------AGP1                                   --------->ARR11(3)                                   --------->ARR14(2)                                      --------->LBD16                                   <---------ARR11(3)                                     --------->LBD16                              --------->TOE1(1)                                       --------->ATERF1(1)                             ==============HOX2a_HOX2a                      --------->ARR14(2)   <---                             ===============HOX2a_HOX2a                     <---------ARR14(2)   ----                     <-----------GT1<------ZmHOX2a(2)                   <------ZmHOX2a(1)<------NtERF2                   <----------DOF2<---------CCA1(2)               --------->ZAT6      --------->PCF5             <----------DOF2 ------>ZmHOX2a(1)            <----------DOF2  <------ZmHOX2a(1)  <------ZmHOX2a(1)   tgaaaaaattcttagctttctctttacattcctcgtagatctcaaaaacttcattctcgactttagaaacactaggaggatacttggggtccccgaggaa  5897700                                                               --------->O2                                                               <---------O2                                                             <---------ALFIN1                                                 --------->At4g35610                                                 <---------At4g35610                                          <-----------GT1   --------->MYB46(3)         <----------DOF2                                      <------ZmHOX2a(1)    ------->TEIL           <---------At4g35610                                    <---------TOE1(2)     <-----------GT1         --------->At4g35610            ---------->DOF2         <---------TOE2(2)   <---------ATHB12        <---------ZAT18 ------At4g35610        <-------GAMYB<---------YAB1--------->RAP2.6(2)    <---------ANAC58 ----->At4g35610 --------->MYB52(1) <---------TOE2(3)   <---------MYB52(2)<---------ANAC58    ------>ZmHOX2a(1)   gctcataaactttgcaaaggaacgggtgttaatggtcttaggattaacatcagcagcaatgaaccacttggccatagcgttgtgagcttctttctcctca  5897800                                                     ------->TEIL          ------------>CBF                     <----------DOF2          <---------AHL20(2)          --------->ANAC46           <---------ARR14(2)                 --------->AHL20(2)          --------->ANAC58           --------->ARR14(2)            *TSS --------->AHL20(1)          --------->ANAC58           --------->GLK1(2)         <---------CCA1(2)              --------->ARR11(3)          <---------GLK1(2)       ------>ZmHOX2a(1) <-----------GT1 <---------ARR11(3) --------->At4g35610 --------->MYB46(3)  --------->TOE2(3)  >>>>>>>>>RAP2.2            <---------CCA1(2)---------->DOF2   tcaacaacaagagaatcgtccaactttagtttcttcctcatatctaaataaaatgaaccatattagtatatatctcactcaatcccataagcagagaaaa  5897900                                                            ----------->GT1             ----------->GT1                                                          ---------->DOF2        <------ZmHOX2a(2)            <---------ICU4                           <---------AGP1       --------->ANAC46      --------->HSFB2a(2)                       <---------ANAC46          --------->ANAC58   <----------DOF2                        <-------TEIL<------ZmHOX2a(2)   --------->ANAC58   caaaacttttggaatcagtacatatggacacatatacaaacacatacaggtcgtagatcagaaagtaaaatcaaacaagacagatcagaacagaaaaacc  5898000                                                                                                    <                                                                                                   <-                                                                                                   --                                                                                                  <--                                                                                                  ---                                                                                                <----                                                                                                -----                                                                                                <----                                             <---------ANAC46   --------->DAG2                <------                                            <---------LBD16    ---------->DOF2                -------               <---------WRKY12     --------->ZAT18 --------->At4g35610                      <------ZmHOX2a(1)               <---------WRKY38(1)<-------MYC3  <---------ARR14(2)                  ----------->RAV1(2)             <-----------HVH21    ------->MYC3  --------->ARR14(2)   <------ZmHOX2a(1)     --------->ALFIN1   ctagaaattaggcgttgtcaacgagaagacagtacatgtgtacaatagcggagacgctgaaatgaaaaagaggagaagagattagaacctgaagaggagc  5898100                                                          <---------ANAC46                                                          <---------TOE1(1)                                                         --------->SPL7      --------->bZIP60(2)                              <---------SPL7  --------->ATERF1(1)                                --------->ANAC46  <------NtERF2                                      --------->ANAC58 ---------DEAR3(1)                <---------ANAC46   --------->ANAC58 -----NtERF2          --------->MYB46(3)            ------->TEIL ------->ATERF1(1)   --------->ANAC58           <---------------AtSPL8 -------ATERF1(1)    --------->AtLEC2           --------------->AtSPL3               <----------DOF2 ------>LBD16        --------->ANAC46       <------ZmHOX2a(1)                      <---------------AGL15 --NtERF2<---------WRKY12      <---------RAP2.6(2)  --------->SPL7         <---------TOE1(3) ---->ATERF1(1)      --------->ANAC58     <---------TOE2(3)<---------LBD16 <---------TOE2(3) -----LBD16   --------->DOF5.7(2)<---------ZAT2 <---------------AtSPL3<---------ARR14(2) ---ARR14(2)  <---------MYB52(1) <---------At4g35610<-------TEIL      --------->ARR14(2)          --- -->ARR14(2) --------->TOE2(3)<---------At4g35610 <---------SPL7     <------ZmHOX2a(1)      ---------   cggaggcgaggtcatcgttatccaagcaacgttgctgctggtttgaggaagacgtacggtacggggagagaggatttagggttttcgatttatggagaaa  5898200                                                                                 <---------ANAC58                                                                                 ====================bZIP_DOF                                                                                 ====================                                                                                 <---------TGA1a                                                                                 <---------ANAC58                                                                                ------->TEIL                                  <---------AHL20(1)                            --------->SPL7                                  --------->ARR11(3)                            <-------TEIL  -------                                  <---------ARR11(3)                          <---------SPL7<--------                       <---------ARR11(3)              <------NtERF2          --------->TOE2(2)<-----                       --------->ARR11(3)             --------->LBD16        <---------ANAC58<-------                      <---------CCA1(2)     <---------YAB1                   <---------ANAC58<-------            <---------YAB1        --------->AHL20(1) <---------ANAC46        <---------ANAC55(2) ---------->DOF2    <---------AHL20(2)    --------->YAB1                     --------->ANAC55(2) ------>AHL20(2)    --------->AHL20(2)    <-----------GT1                   --------------->AtSPL3 -->GT1     ------------>CBF     <---------CCA1(2)  <---------LBD16        <-----------GT1<----------DOF2   ataaaaagacgattttcaatgtttaaatctttctaatatcttatttatcatttaggcgggaatgctactggagctatttacgtacgtggcctctttttat  5898300  Previous    Next  AGI:  At3g17260.1    Description:  transposable element gene. hAT-like transposase family (hobo/Ac/Tam3), has a 2.6e-27 P-value blast match to GB:CAA29005 ORFa of Maize Ac (hAT-element) (Zea mays) Range:  from: 5896081    to: 5897841    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At3g17261.1    Description:  unknown protein Range:  from: 5898008    to: 5898115    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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