Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                       --------->AtLEC2                                                                     ------>ZmHOX2a(1)                                                                   <---------ANAC58                                                                   <---------ANAC58                                                                --------->GLK1(1)                                                            <---------ALFIN1                                                           <------NtERF2                                                          <---------ATERF1(1)                                                          --------->LBD16                                                          <---------RAP2.6(3)                                                          ------>NtERF2                   <---------GLK1(2)                     --------->ANAC46              <-----------GT1                            --------->RAP2.6(2)       <---------ATHB12                                  --------->ATERF1(2) -NtERF2  --------->ICU4                                 <---------ATERF1(2) --DEAR3(1)<---------ICU4                               --------->RAP2.6(3)    --------->At4g35610 --HVH21--------->YAB1                                  <---------LBD16        <---------At4g35610  <   gaaaaccctatcaatattacacattctcttaaaaaacaaattgagttttgctacataagccggcacatttcctgcaaactgagcttcacacactgatata  5884500                                      --------->ANAC58                                      --------->ANAC58                                     --------->SPL7                                     <-------TEIL                                   <---------ARR14(2)              --------->DEAR3(1)   --------->ARR14(2)                        <----------DOF2            <---------At4g35610  <---------------AtSPL3                   ------>ZmHOX2a(2)   <------            --------->At4g35610  <---------------AtSPL8                   ======================HOX2a_HOX2a        <----------DOF2         <---------ANAC46               <---------At4g35610            <------ <---------ATHB12             --------->MYB52(1)               --------->At4g35610         --------->YAB1 ---------TOE2(3)       <---------At4g35610     <-----------HVH21    ------>ZmHOX2a(1)   ------>ZmHOX2a(1)   ctaatgaaggctttagcagccccttgagatgctaacgggtacgccttagaggtcacaaacccttgagcttcctcgatcgctttaatggctccttcataat  5884600                                                                                                  <--                                                                                              <------                                                                                              <------                                                                                         --------->YAB1                                   <------ZmHOX2a(2)                                     --------->ATHB51       --------->ANAC58           --------->ARR14(2)                                     <---------ICU4       --------->ANAC58           <---------ARR14(2)                                     --------->ATHB12   --------->ANAC58  <------ZmHOX2a(2)                                       <---------YAB1   <------   <---------ANAC55(2)          <---------DEAR3(2)                         <-------TEIL  <-----------   --------->ANAC58 <---------ARR11(3)                                  <------MYB46(1)  <--------ATHB1   --------->ANAC55(2)       <-----------HVH21                          <------MYB83     -------->ATHB1   --------->ANAC46 <---------ARR14(2)                               <---------MYB52(1) --------->ICU4   --------->ANAC55(1)------>ZmHOX2a(2)                             ------>NtERF2       <---------ATHB12 ---ICU4            --------->ARR14(2)  <---------ANAC58          --------->RAP2.3(1)   <---------ATHB51 ---GLK1(2)         --------->ARR11(3)  <---------ANAC58        --------->DEAR3(1)   ------------>ATHB5   ctctcacgcaagtctcaaatgggatcttgagcgtcggatcagtcgtggtattcactgagcctttcatcgccgctaggttcttattgcccaataattgcgt  5884700                             <------MYB83                             <------MYB46(1) <---------HSFB2a(2)       <--------P --------->HSFB2a(2) --------->ARR14(3)                                                            <- --------DOF2        --------->ARR11(3)      <---------MYB46(3)                                 ----- ---ANAC58           <---------ARR14(3)   <-----------RAV1(1)                                   <---- ---ANAC58           <---------ARR11(3)--------->ARR14(2)                                  --------->ALFIN1 ---ANAC46     <---------HSFB2a(2)     <---------ARR14(2)         --------->O2   <------MYB46(1)----- -ATHB5        --------->HSFB2a(2)<---------ANAC46  <------ZmHOX2a(2)            <------MYB83<-------   cttttggaagactaaatcgagaagaccttgtaggtcgagggtatatgttgttggatcagagattagccaagtgatgcagaagttggtgtcaatgtgcggt  5884800  --------->REM1(2)  --------->ZAT14  <---------ZAT14 --------ANAC46                                                     <---------MYB46(3) ---->GLK1(2)                                    <---------------------WRI1                       --- -----ARR14(2)                          <---------LBD16     ---------->DOF2        <------ZmHOX2a(1) ---->ARR14(2)                     <-----------HVH21    <----------ID1<---------WOX13(1)        ----- --DEAR3(1)<------NtERF2        <----------DOF2 ---------->DOF2     --------->ATHB12       <------ZmHOX2a(1)   tctgtgcagagtcgggataagaaggtttttgtgactttgtcactcggagacaaagatgaagacaaaggggtgattgatagaagaaggagtagaggaagaa  5884900                                                    <---------ARR11(3)                                                    --------->ARR11(3)                                                   --------->YAB1                                                  ----------->GT1                                                ---------->DOF2                                              --------->LBD16                                             <---------ANAC46<---------ANAC58           <-----------GT1                        --------->YAB1      <---------At4g35610 <---------ARR14(2)   <-------TEIL                  --------->ANAC58         <---------ERF1<---------ICU4           <---------HSFC1(2)      --------->ANAC55(2)   --------->ANAC58<------NtERF2-------->HAHB4           --------->HSFB2a(1)      <---------ANAC55(2)   --------->ANAC58--------->At4g35610 --------->ARR14(2)--------->HSFC1(2)     <-------TEIL --------->ANAC58   <---------ANAC58   --------->ICU4            <---------HSFB2a(1)   <---------ARR14(2) --------->ANAC58    <---------DEAR3(1) <---------ANAC58     <------MYB46(1)   --------->ARR14(2) --------->ANAC58    <---------RAP2.3(3)<---------ANAC46     <------MYB83 -------->GT1     --------->ANAC46   <---------ANAC58<---------YAB1          <---------HSFB2a(2) ------>GT1 <----------DOF2 --------->ANAC46<---------LBD16<---------YAB1 --------->GLK1(2)   gtgaaaatacgtttcttttgacgcaaggataagccattgtcttggctgcggaaagataattatgcgtatacttgagagtctgggaggttcttactgcata  5885000          <-------TEIL     --------->AHL20(2)     <---------AHL20(2)   <---------YAB1            ---------->DOF2        <---------MYB46(3)                             --   <---------AHL20(2)    ----------->RAV1(1)   <------MYB46(1)                                  -----   --------->AHL20(2)   --------->ANAC58       <------MYB83                                  <-------  --------->YAB1        --------->ANAC58    <---------ANAC58                               <---------  --------->TOE2(3)     <----------ID1      <---------ANAC58                            ------------>CBF   ctaatattaatatacatagtttttggacgacaaaagtcaagttttagcttggtgttgttgatgaaatgttacccaaatttgtttttcttagtcaattgtt  5885100                                                                                   <----------DOF2                                         --------->ANAC58                        <---------YAB1                                         --------->ANAC58                       --------->ARR11(3)                                      ------------>CBF                          <---------AHL20(1)                                     --------->ANAC58                           --------->AHL20(1)                                <---------AHL20(2)                              <---------ARR11(3)      <---------AHL20(2)        <---------YAB1  <-------GAMYB           ----------->GT1        <-----      --------->AHL20(2)       <---------AHL20(1)           <---------WOX13(1) --------->RVE1(1) ------->ZAT6                  --------->AHL20(2)   <---------YAB1      <---------TOE2(3)<----------DOF2 ---->WRKY38(1)                --------->AHL20(1)<---------MYB52(1)<---------TOE2(3)    >>>>>>>>>>>>WRKY18 --MYB46(3)         <----------DOF2  --------->ANAC58      <------------CBF>>>>>>>>>>GT-3b     <----- ---CBF <-----------GT1   ------------>CBF --------->MYB46(3) --------->ATHB12 --------->CCA1(1)    -   gactctaattaaacaccttcttctttagttcaatataattcgcaatccaccgttgttattcgattgattaagttaagaaaaatatctttgacttttgact  5885200                                                                       --------->AHL20(1)                                                                      --------->AHL20(2)                                                                   <---------AHL20(2)            --------->ARR11(3)                              ----------->GT1       --------->ANAC58                               --------->GLK1(2)<---------AHL20(1)       --------->ANAC58                               <---------ARR14(3)       --------->ANAC46    <------ZmHOX2a(1)          --------->ARR11(3)      <---------AHL20(2) <-------GAMYB          <-----------RAV1(2)           --------->ARR14(3) --------->AHL20(1) ----ANAC58 --------->GLK1(2)                         <---------ARR11(3) <---------AHL20(1) ----ANAC58 <---------ARR11(3)                --------->ARR11(3)  --------->AHL20(2) ---------->GT1      <----------DOF2          <---------ARR11(3)  <---------AHL20(2)   tggggttacaagaaaatcttacactttcaggagttttgtttttgaaaagatttcaaaatcttgggttattaaatatatattatatcatacaaaactccca  5885300                                                   --------->GLK1(1)  <------NtERF2                                                   <---------GLK1(1)  --------->LBD16                                                 <------ZmHOX2a(1)  <---------LBD16                                             --------->TOE1(2)    --------->ARR14(2)             <---         <---------AHL20(2)                  --------->TOE2(2)    <---------ARR14(2)       --------->ARR11(3)     <----------DOF2                 <-----------ARR10         <---------ANAC58            <---------ARR11(3) <----------DOF2                    <---------CCA1(2)          <---------ANAC58           <---------CCA1(2)   aaactttctttttattttttgtgcaaaacaaaactcccaaatctaaacataggaattctatggatgagtgtccgcattccaaacagtgttttatatcttc  5885400  Previous    Next  AGI:  At3g17225.1    Description:  invertase/pectin methylesterase inhibitor family protein. similar to invertase/pectin methylesterase inhibitor family protein [Arabidopsis thaliana] (TAIR:AT3G17230.1); similar to Pectinesterase inhibitor precursor (Pectin methylesterase inhibitor) (PMEI) (AdPMEI) (GB:P83326); contains InterPro domain Pectinesterase inhibitor; (InterPro:IPR006501) Range:  from: 5884380    to: 5884937    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
	printer-friendly version