Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                              <---------ANAC58                     --------->LBD16                    --------->ANAC58                                                               --                    --------->ANAC46                                                              ---      <------ZmHOX2a(2)     <---------ANAC58                                                      <--    <------ZmHOX2a(1)------>NtERF2                          <---------At4g35610                   --- --------->HVH21    --------->ANAC58                        --------->At4g35610                   --- ------ZAT2      <---------ARR14(2)                      <---------At4g35610                   ------ ----->ZAT2      --------->ARR14(2)                      <---------ZAT2            <----------DOF2--- ------At4g35610--------->GLK1(1)                 ------>ZmHOX2a(1)           <-----------GT1  <----- ----->At4g35610<---------GLK1(1)             --------->ARR11(3)    --------->TOE2(3)          ------ -REM1(2)  <----------DOF2  <---------ANAC46  <---------ARR11(3)    --------->TOE1(3)        --------   gctgaaggatcaactttgaaatccgccatgtcttgttcacatgttgaaggtccttccatagctgctgaaaccttaatgttcaaccctttgccatcgcctg  5883500                                                                                                 <---                                                                                            ---------                                                                                            <--------                                                                                          <--------P                                                                                         <-------GAMYB         --------->At4g35610                                                             <---------ANAC58     --------->ARR14(2)                                                                  <---------ANAC58     <---------ARR14(2)                                                                 --------->MYB55(2) <-----------RAV1(2)                                                                    <------MYB83 ---->NtERF2                                                                            --------->MYB52(2) ------>ANAC58                                                                          <---------MYB46(3) -------bZIP60(1)                              <-----------RAV1(1)                      <---------DEAR3(2) ------>bZIP60(1)                             <---------TOE2(3)                         <------MYB46(1) ------>ANAC46                            --------->YAB1                               --------->MYB111(1) ----->HVH21                       <---------ZAT18                                     <---------MYB46(3) ------>ANAC58    --------->ATHB12 --------->ZAT18                                     <---------AtMYB61 ----SPL7<---------At4g35610       --------->ZAT14             --------->ALFIN1       <--------P <--- ----->TGA1      <---------YAB1    <---------ZAT14   <---------ZAT18  <----------DOF2<-------GAMYB --->RAV1(2)   --------->YAB1 <---------YAB1 --------->YAB1  <---------ANAC46       <---------ANAC46   acgccaggctctgcttagcatcattgagactgcttattgcactcttataatgttgtacacatgaggtgtatgctttcttcatagtggggttggttgctgt  5883600                                                                                                 <---                                                                                              -------                                                                                              <------                                                                                        ----------->RAV1(2)                                                                                        --------->At4g35610                                                                                        --------->ZAT2                                                                                        <---------At4g35610                                                       ------>MYB83                   <---------ALFIN1                            ----------->RAV1(2)        ------>MYB46(1)               --------->At4g35610                         <---------HSFB2a(1)  --------->ZAT18                        <---------At4g35610                         --------->HSFB2a(1)  <---------ZAT18                     <------ZmHOX2a(2) ------ANAC58       ------>ZmHOX2a(1)         --------->ZAT14                    --------->ARR11(3) >At4g35610         --------->LBD16 ------->TEIL  --------->ARR14(2)             <---------ARR11(3) -At4g35610       ----------->RAV1(2)         <---------ZAT14                    --------->ARR14(2) ------ANAC58     <---------LBD16 <---------ZAT18 <---------ARR14(2)             <---------ARR14(2)   cttgactagagattgaattttcctgaaaccttctgatgcacttgtttgtgcagaaccaaatgtgatatttgcaagcgtttgaagatcagcacctgaggtc  5883700                                            <----------DOF2                         ---------->DOF2                                            <---------DAG2                     <---------ANAC58        <---------GLK1(1)                   =======================================bZIP_DOF        --------->GLK1(1)               ---------->ID1                         <---------ANAC58     <------MYB46(1)                   <-----------GT1                   --------->O2     <------MYB83                 <------MYB83                           --------->TGA1a   <--------P                    <---------AtMYB61                       <---------O2  <-------GAMYB        --------->SPL7 ----------------------->TaNAC69(2) <---------TGA1a       <----- -------DOF2      <---------ANAC46<------MYB46(1)                        ======================bZIP_DOF -->ARR11(3)    ------->TEIL  --------->ATHB12             <----------DOF2    <---------ZAT18  ------ ---ARR11(3) <---------REM1(1)<------ZmHOX2a(1)            ========================bZIP_DOF   <------   tttgggttggatttcatgtagctcgtacagaaggattggtttttcgcttttccacatatcgcttttatgtctgccacttgtgcgttcaaagaaccagtca  5883800                                                                                    <---------At4g35610                                                                                  <--------P                                                                                <------MYB46(1)                                                                                <------MYB83                                                                               <---------AtMYB61                                                                              <---------MYB52(1)                                                                             <-------GAMYB                                               ------>NtERF2 <----------DOF2--------->MYB55(2)                                            --------->At4g35610             <---------MYB46(3)                                            <---------At4g35610  <----------DOF2<---------MYB46(3)                                     <-----------RAV1(2) <---------ANAC58   --------->MYB52(2) ----ICU4                          <-----------HVH21 <----------DOF2    <---------YAB1     <-------GAMYB --->YAB1                       <---------MYB52(1)  <---------ICU4     <---------TOE1(2)  <---------MYB46(3) ---ATHB12        <---------ARR11(3)<---------MYB52(1)   <---------ANAC58  <-------TEIL  <---------YAB1   ttacaaaaaacatcagagaagacattaaaactctgttcgtcaggtatgctgccatctttgcttctttctttcttatgttcgttggtagatgatggttaag  5883900                                                                                 --------->MYB111(1)                                                                                 ----------->GT1                                                                 --------->YAB1 <--------P                                                   <---------ANAC58 -------->HAHB4  <-----------GT1                                                   <---------ANAC58 --------->YAB1<-------GAMYB                                               <------------CBF --------------->AGL15                                               <---------ANAC58 <---------------AGL15                                              --------->ATHB12 ======================================                                     <---------ANAC58          ----------------->AGL2                                    <-------TEIL<---------WOX13(1) <---------YAB1<---------MYB46(3)                             <---------AHL20(2)<---------ANAC58----------------->AGL3        <-------                           <-----------TBP  <---------WOX13(1) <-----------------AGL3    <----------DOF2                          <---------ICU4   <------------CBF  <<<<<<<ZML2       <---------ANAC58 <-----------GT1       --------->YAB1<---------ANAC58  --------->ZAT6          <---------ANAC58<-----   ttattcccttactatgcctgactattcatatttatagatgcatgcgattgattgcttccactagaactaataatagaaatgggttgttactctttctgat  5884000                                                                          <---------At4g35610                                                             <---------ZAT14                                                             --------->ZAT18                                                             --------->ZAT14                                             ======================================================== ============================================================MADS_MADS <---------MYB52(1) --YAB1  --------->AtMYB61     ----------->GT1   --------->TOE2(3)    <-------GAMYB                <- ----GLK1(2)      ------>ZmHOX2a(1)          <---------------AGL15------------>AtMYB77          <----   tcttagttagaccacaagtccttatgtaagagagagagaaaactttgctattcttagcattagtgcagagacagttatctgattagtattcgtctaactt  5884100                          --------->CCA1(2)                         <---------ARR11(3)                         --------->ARR14(2)                         <---------ARR14(2)                         --------->ARR11(1)                         --------->ARR11(3)                       <-------TEIL                        <------MYB83                       ----------->ARR10                   <------MYB46(1)                   <---------TOE2(3)                     xxxxxxxxxxxxxxxxxxxxxx>smallRNA(i2)                   --------->MYB59                     <-----------RAV1(1)    ------>ZmHOX2a(1) <--------P                       <---------MYB46(3)                           < ============================MADS_MADS             --------->ATHB12                                 - ---------DOF2  <----------DOF2                   <---------YAB1                         --------->GLK1(2) -------GT1  --------------->AGL15                --------->ICU4                  <------ZmHOX2a(1)<-   actttcctgacttctcttctttaggtagatatgcattcactaatatgtgttcatgatttgttggtgctaagaaagattactgtaggaagaggttctatgg  5884200                                                                                            <--------                                                                 --------->At5g28300       <---------AHL20(2)                                                                ----------->GT1            --------->AHL20(2)                                                          --------->ANAC58         <---------AHL20(1)                                                          --------->ANAC58         --------->AHL20(2)                                                          --------->ANAC46         <---------AHL20(2)         --------->ICU4                             --------->At4g35610            <---------ARR11(3)       --------->YAB1                          <---------ZAT2  --------->ANAC58    --------->ARR11(3)      <---------YAB1                           --------->At4g35610            <---------YAB1--------- ---------YAB1             --------->MYB52(1)  <---------At4g35610    <---------ICU4   <-------TEIL -------->ICU4    ----------->RAV1(1)          --------->ZAT2  --------->ANAC58  ------->TEIL       < --------ARR11(3)--------->ANAC46     ---------->DOF2  <-------TEIL  --------->ICU4--------->AHL20(1)   agataattgtcataaatatacaccagaagtaacgagagattaaagtcttagctgagatgcaagacacggtaattttgactatgaatatattcatttattg  5884300                                                                      ---------->DOF2                                                                   <---------ANAC55(2)                                                                  <-------TEIL                                                                 --------->CCA1(2)             <-----                                                          ----------->HVH21                <--------- -AHL20(2)                                              --------->At4g35610                --------->TOE1(2) >ATHB12                  <---------WOX13(1)            <---------At4g35610       ----------->GT1 ----------DOF2      <---------ANAC46                 <-----------RAV1(2)  --------->GLK1(2) <-------   gtctttaagttactagtacatcagcgtgaatgacatttagtagtttctgccttcttgcaggtgaaagatacataaagaatcaagaagtcaaaacgtcgga  5884400  Previous    Next  AGI:  At3g17220.1    Description:  invertase/pectin methylesterase inhibitor family protein. Identical to Pectinmethylesterase inhibitor 2 precursor (PMEI2) [Arabidopsis Thaliana] (GB:Q9LUV1); similar to invertase/pectin methylesterase inhibitor family protein [Arabidopsis thaliana] (TAIR:AT1G48020.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO17117.1); contains InterPro domain Pectinesterase inhibitor; (InterPro:IPR006501) Range:  from: 5883334    to: 5883855    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At3g17225.1    Description:  invertase/pectin methylesterase inhibitor family protein. similar to invertase/pectin methylesterase inhibitor family protein [Arabidopsis thaliana] (TAIR:AT3G17230.1); similar to Pectinesterase inhibitor precursor (Pectin methylesterase inhibitor) (PMEI) (AdPMEI) (GB:P83326); contains InterPro domain Pectinesterase inhibitor; (InterPro:IPR006501) Range:  from: 5884380    to: 5884937    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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