Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                     <---------ANAC58                   <---------ANAC58                   <---------ANAC46               --------->GLK1(1)               <---------GLK1(1)               --------->CCA1(2)              <---------ARR14(2)        <---------KAN4(2)              <---------GLK1(2)     <---------ANAC55(2)      --------->LBD16               --------->ANAC55(2)     --------->ANAC46  <---------MYB46(3)                    <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)    --------->TOE1(2)  --------->MYB52(2)                --------->ZAT18 ->ANAC46     --------->ARR14(2)   <---------LBD16 <-------TEIL                     <-----------GT1 ->ANAC58   ----------->ARR10     --------->MYB52(1)     <---------ZAT18        <---------ZAT6 ->ANAC58 <------ZmHOX2a(2)      ----------->HVH21--------->CCA1(2)         <---------GLK1(1)   atggaacgcgcgatcagatttgcgtttgtggcaatatgacggaatgtacaagattcaaatgcactaacaatctcatggatttgtgttaaccaatttctat  5881900                                      <---------At4g35610                                      --------->At4g35610                             <---------MYB52(1)                             xxxxxxxxxxxxxxxx>smallRNA(s)                            <----------DOF2                           xxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)                           <---------ANAC46                      --------->MYB52(1)                  <------NtERF2      <xxxxxxxxxxxxxxxxsmallRNA(i)               --------->At4g35610  <---------RAP2.6(2)               <---------At4g35610  <---------DEAR3(1)           --------->LBD16      <-------TEIL              <---------ATERF1(1)   <---------RAP2.3(2)       <---------At5g28300    <-----------GT1             <---------RAP2.6(2)  --------->ALFIN1          <---------YAB1  <---------ARR11(3)             <---------DEAR3(1) <xxxxxxxxxxxxxxxxxxxxxxxxsmallRNA(l2)       --------->ARR11(3)            <---------ORA47(1)  <---------ANAC58          --------->YAB1   --------->RVE1(1)    -----            --------->RAP2.6(3) <---------ANAC58  xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)       <------   agaaaggctatttggacggctgcaaaacggcgttaagtgcggctggacagtccaactctattatcaccgtggtaagaatatctctatatacattttttgt  5882000                  --------->ANAC58                  <---------ANAC55(2)         <---------ICU4         --------->ATHB12        <---------YAB1        --------->ICU4        <---------ICU4           ---------->DOF2      --------->YAB1       --------->ATHB51        <---------AHL20(2)      <---------ICU4       <---------ICU4          --------->AHL20(2)     <---------YAB1     --------->YAB1         --------->AHL20(2)                          ----------   --------->YAB1 --------->ANAC58             <---------AHL20(2)                 ----------->GT1 ----->ID1 <---------YAB1 <---------YAB1  <----------DOF2                         ------------------- -----RAV1(1)--------->WOX13(1)           <---------DAG2                        ---------->DOF2   cgcacttatcatgattaatcaagtaaacataattgttacaaacactttataaattaaaaaagcttcaattcaatttgcacagaaaagaaaaaaaaaagaa  5882100                                                                         --------->ANAC58                                                                         --------->ANAC58                          --------->GLK1(2)                         <---------HSFB2a(2)                          <---------ARR14(2)                    <---------AHL20(2)                      <------ZmHOX2a(1)                         --------->AHL20(2)               ----                   <---------LBD16                          --------->AHL20(2)                ------>ZmHOX2a(2)   <-------TEIL    <-----------RAV1(2)   <---------CCA1(2)  <---------AHL20(2)               <------ZmHOX2a(2) >DOF2         <---------ARR14(2)  --------->ICU4<------ZmHOX2a(1)  --------->HSFB2a(2)--------->TOE1(2) ----->ANAC81  <---------ZAT14     ----------->GT1         --------->AHL20(2)      --------->YAB1<---   gaagattcaatacagagtataccaggagcatctggtaatgtttatatctgaggacgttttatttaattttttggaacgaaaacaataatccgacgatcgt  5882200            --------->ARR14(2)            <---------ARR14(2)           --------->GLK1(1)           <---------GLK1(1)     <-------PIF5     ------->PIF5                           <---------------AGL15    ===========================bZIP_DOF     --------------->AGL15    --------->ANAC58              ------>ZmHOX2a(2)    ===========================bZIP_DOF    ----------------->AGL3    --------->ANAC58             <------ZmHOX2a(2)    <---------O2                <---------AGP1    --------->ANAC46            --------->ARR14(2)    --------->bZIP60(2)         <---------ARR14(2)    <---------TGA1a             <---------ARR11(3)    --------->TGA1a             --------->ARR14(3)                                         --------->CCA1(2)    --------->O2                --------->ARR11(3)                  <---------ZAT2        <---------ARR14(2)  <---------AtLEC2              <---------ARR14(3)                  --------->At4g35610   --------->ARR14(2) ----->ARR14(2)             ---------->DOF2----------------->AGL2   <---------At4g35610   *TSS ------ARR14(2)     <----------DOF2 --------->ETT(2)        <----------DOF2             ----------->ARR10   atttgcacgtcgcaaatccgctcttttaatcaaagatctcgaccgtccatttttagttaagactttagagagctgataagtggaatagtggagatttgca  5882300                                                            <---------ANAC58                                                            <---------ANAC58                                                           --------->STY1(2)                                                        <---------ANAC58                                                        <---------ANAC46                                                 --------->ANAC58                            --------->ANAC58     --------->ANAC55(1)              <------ZmHOX2a(2) --------->MYB52(1)      <---------ANAC58              ===================HOX2a_HOX2a     --------->ANAC55(2)                 ------>ZmHOX2a(1)            <------ZmHOX2a(1)  ---------->DOF2   <---------ANAC55(2)          <--------P          <---------TOE2(3) --------->ANAC58     --------->ANAC58      xxxxxxxxxxxxxxxxxxx>smallRNA(se3) <-----------RAV1(2)      <------ZmHOX2a(1)---------->DOF2 <---------STY1(2) <-------GAMYB   ttcgcaggggataaggatcaaaaatggaggaagcaaagggacctgtgaagcacgtattgcttgctagtttcaaagatggggttagtcctgagaaaatcga  5882400                    <---------ARR14(2)               --------->ANAC58                                                           ===========               --------->ANAC58                                                           ------>ZmHOX2a(1)               --------->ANAC46             <---------YAB1                <---------ARR14(2)            <---------ARR14(2)           --------->TOE1(2)     ----------->GT1            ===========            --------->ARR14(2)           --------->TOE2(2) <---------MYB46(3)        <---------ANAC58         <---------TOE2(3)             ------->TEIL<----------DOF2<---------AHL20(2) <---------ANAC58       ---------->DOF2      --------->WOX13(1)---------->DOF2<--------P   <---------GLK1(2)  <-------   agagctcatcaaaggttacgccaatctcgtcaatctcatcgaacctatgaaagctttccactggttagtaaatttggattctgaattgcttcctagtgtt  5882500                  ---------->DOF2                --------->LBD16              ------>ZmHOX2a(2)             --------->CCA1(2)             <------ZmHOX2a(2)                                                       ------>ZmHOX2a(1)            <---------ARR11(3)                                                    ------>MYB83            --------->ARR14(2)                                                    ------>MYB46(1)            --------->AGP1                               --------->ANAC58     <---------ARR11(3)            <---------ARR14(2)                 <---------ANAC55(2)    --------->GLK1(1) ====================HOX2a_HOX2a               ----------->GT1   <---------LBD16<---------MYB59------ ===================HOX2a_HOX2a          <---------YAB1  --------->ANAC58 --------->YAB1<---------ZAT6 --ZAT6    <---------GLK1(1)     --------->At4g35610     --------->ANAC46<-------TEIL================   agacatatgctcgagatccgaaaaacacttccatcaactcaatatgattatgtaaaactaagcaatttggggaaattcatgaccttcctagtgttgatct  5882600                                                                                                -----                                                                                               ------                                                                                             <-------                                                                                             --------                                                                                       --------->ATHB12                                          ----------->GT1                              --------->ATHB51                                        ---------->DOF2                     ---------->ID1   <-------                               <---------ARR11(3)                <-----------ARR10     -------->ATHB1                           --------->YAB1--------->DAG2          <---------ARR14(2)    <---------ICU4              --------->ARR14(2)  <----------DOF2                --------->ARR14(2)   --------->ICU4< >ZmHOX2a(2)  <---------ARR14(2) ------>ZmHOX2a(2)               ------->TEIL         <---------ATHB51 =HOX2a_HOX2a --------->GLK1(2)--------->ARR11(3)                --------->GLK1(2) <---------AHL20(2)   aatttccctcagagagaatccatctccattgatgatcttttgaaaagttaaatcaactaaatcgacgaatctgctcttgtcttattgaattattggatct  5882700                                                                <<<<<<<<<GATA-1                                                                <<<<<<<<<GATA-3                                                                <<<<<<<<<GATA-2                                <-----------ARR10         <----------DOF2 ------>GT1                     --------->GLK1(2)   <---------ALFIN1 >ZmHOX2a(2)                    --------->ARR14(2)  --------->ANAC46                              <-- --ARR14(2)                     <---------ARR14(2)  --------->ANAC58                   <-----------RAV1(1) ->ARR14(2)                    <---------GLK1(2)    --------->ANAC58                   <---------MYB46(3) --AGP1      ---------->DOF2--------->YAB1<---------TOE1(3)     <<<<<<<<<GATA-4---------->DOF2    <-- ---------AHL20(2)--------->CCA1(2)       <---------TOE2(3)    --------->ARR14(2)   --------->GLK1(2)   gtataattttaggggaaaagatgtgagcattgagaatctgcatcaaggttacacacacatctttgaatccacatttgagagtaaagaagctgttgcagag  5882800  Previous    Next  AGI:  At3g17210.1    Description:  stable protein 1-related. Identical to Putative protein Pop3 [Arabidopsis Thaliana] (GB:Q9LUV2;GB:Q8LCB1); similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G22580.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO44961.1); contains InterPro domain Dimeric alpha-beta barrel (InterPro:IPR011008); contains InterPro domain Stress responsive alpha-beta barrel (InterPro:IPR013097) Range:  from: 5882290    to: 5883206    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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