Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                     <-------TEIL                                                            <---------ATHB12                      ---                                                           ------>MYB83                          ----                                                         <---------MYB46(2)                    ------                                                         <---------MYB59                     <-------       <---------YAB1                                   --------->ANAC46                    ---------     <---------ICU4                                   <-----------GT1                       ---------     --------->YAB1            --------->ZAT2       <----------TaMYB80                     --------->WOX13(1)    --------->ICU4             <---------ZAT2   ----------->GT1  --------->YAB1         <-----------GT1 --ATHB12         <------ZmHOX2a(1)      <---------GLK1(2) ------>MYB46(1)          --------->WOX13(1)   tggataattatgtttggctaggatgcctagtccagctagattagattatgaagtatataccaaacaatgttcatttatcaaattttcaattaacaatcaa  5861100      --------->AHL20(2) ---->GAMYB                                               <---------AHL20(2) ----->ANAC46                                    ------>MYB46(1) --->MYB52(1)                                    ------>MYB83 --ATHB12                          <-----------GT1    <---------AHL20(2) >ANAC58                     <-------TEIL       ----------->RAV1(1)              ----------->GT1 >ANAC58             --------->ANAC46         --------->MYB46(3)                --------->YAB1   cgaaattttaaaatagaagctctacgaaaaatacatttaacatgagaaaccaacatatattttaaaaactgttgataaacaataagaaaaaaacttgaga  5861200                                                                                                   --                                                                                                 <---                                                                                                <----                                                                                           --------->MYB52(1)                                                                                     --------->HSFB2a(2)                              <----------DOF2                                        <---------HSFB2a(2)                   <-----------GT1                                         <------ZmHOX2a(1)   <-----                  ----------->HVH21                                    ---------->DOF2 <---------ZAT18              <---------AHL20(2)                                     <------ZmHOX2a(1) --------->ZAT18             <---------AHL20(2)          <----------DOF2   --------->At4g35610<---------ALFIN1-------     <---------ANAC46     --------->WRKY38(1) <------ZmHOX2a(1)   <---------LBD16--------->AtMYB61 <-   cacagtttcgagttttttatttgacctgttgactttggtttcgcttaaggaccatagaaactgctaactcaggaaaaggaccaccttcgggcacaacggt  5861300                                          --------->TGA2(2)                                         <-----------HVH21                                         <-----------TGA1                                        --------->TGA1a                                        <---------O2                                        <<<<<<<<<<HY5                                        <---------ANAC58                                        --------->O2                                        <---------TGA1a                                        --------->bZIP60(1)                                        <---------bZIP60(1)                                        --------->TGA2(1)                                        --------->bZIP60(2)                                        <---------TGA2(1)                                        <---------bZIP60(2)               <------MYB46(1)          ===============================================MYC_MYB             <---------WOX13(1)         --------->ANAC46                             <-----------TGA1      --------->HSFB2a(2)               <---------ANAC55(2)                         --------->ANAC46      <---------HSFB2a(2)               <---------ANAC58                            --------->bZIP60(2)     <---------LBD16                    --------->ANAC55(2)                    ------->GAMYB --------->ALFIN1                      <-----------STF1                    <---------WRKY12 ------->ANAC55(2)                     ----------->STF1                    <---------WRKY38(1) --------RAV1(2)                      <---------TGA2(2)                <---------ANAC46      ------>ZmHOX2a(2) -----MYB52(1) <------MYB83          ----------->TGA1     <---------AHL20(2)  --------->MYB46(3)    - ------HVH21--------->ARR14(2)     --------->YAB1  <-------TEIL        <---------ANAC58    <---------ARR11(3) >GAMYB     <---------ARR14(2)    --------->ICU4------>MYB46(1)        <---------ANAC58  --------->ICU4 --------At4g35610        <---------CCA1(2)     ------>MYB83           <---------LBD16   <---------YAB1   caggtgttcgggcagattggtctatgccatatcgcaacgatgacgtcaccaaattcatattttaaaactcgtttcgggcaacgacaacgtcatgatccct  5861400                    --------->PCF2                    ------>NtERF2                    <---------PCF5                   --------->LBD16                   <-----------TCP11(1)                   <---------ATERF1(1)                   ------>NtERF2                  --------->DEAR3(1)                 <------NtERF2                 --------->ATERF1(1)                 <---------ATERF1(1)                                     --------->TOE1(3)                 <---------LBD16                                         --------->TOE2(3)                <---------ATERF1(1)                               <---------ANAC58              <---------PCF2                                      <---------ANAC46              --------->TCP15(1)   --------->YAB1                 <---------ANAC58         <------------CBF   <---------TOE2(3)                <-----------RAV1(1)--------->RVE1(1) <xx    <---------ARR11(3)    ---------->DOF2      <<<<<<<<<TBF1<---------YAB1     --------->ARR11(3)*TSS    --------->ARR11(3) ----------->RAV1(1)<----------DOF2  <------------CBF    <---------ARR11(3)<--- --------->DOF2--------->PCF2     <---------YAB1    <----------DOF2<----------DOF2          <--------   cccaaaggtctaattgggccccggcccacaaaggttatcatcttctttcttcttctttgtttattgttgcttttgccttaaaatctcttcttcatcatcc  5861500                                                                   --------->At4g35610                                                                   <---------GLK1(1)                                                                   --------->GLK1(1)  <---------MYB52(1)                                              <---------ARR11(3)             <--- xxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)                               --------->ARR11(3)             ---- ------ALFIN1                                                 <xxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)<--- -ICU4               <----------DOF2                 ---------->DOF2                             ----   caccgtttcttaagactctctctctttctgttttctatttctctctctctcaaatgaaagagagagaagagctcccatggatgaaattagcgagaccgaa  5861600                                                                                                   <-                                                                                             --------                                                                                             <-------                                                                                            ---------                                                                                            <--------                                                                                          --------->YAB1                                                                                         <---------YAB1                                                                                       --------->YAB1 ------HSFB2a(1)                             <---------TOE2(3)                         <---------ICU4 ----->HSFB2a(1)                             <---------TOE1(3)                        --------->ICU4- ------HSFC1(2)                         <---------ZAT6                                <---------ATHB51 ----->HSFC1(2)                  --------->CCA1(2)                  <---------DAG2    <---------ATHB12   gtttctccaaggtgatatgtctatctgtatatgtgatacgaagagttagggttttgtcatttcgaagtcaatttttgtttgtttgtcaataatgatatct  5861700                       --------->CCA1(2)                      <---------ARR11(3)            <---------ANAC55(2)            --------->ANAC55(2)            --------->ANAC46  --------->ANAC55(2)            --------->ANAC55(1) --------->ZAT14 --------->YAB1       --------->ARR11(3) --------WOX13(1)   ----------->ARR10   <---------AHL20(2) ->ARR11(3) --------->bZIP60(2) <---------ZAT14                                             <-------- --ARR11(3) ----------->GT1<<<<<<<<<MYB98                                                 <---------ANAC46 >GLK1(1)   --------->ANAC58  <---------ANAC55(2)               ------->TEIL <---------AHL20(2) -GLK1(1)   --------->ANAC58<-----------GT1                    <---------CCA1(2)       <---------REM1(1) -------->ICU4      <---------TOE2(3)  --------->AHL20(2) <-----------GT1--------------->AGL15      -   gaatgatgaagaacacgtaactaagatatgttactgaactatataatacatatgtgtgtttttctgtatctatttctatatatatgtagatgtagtgtaa  5861800                                                                                              -------                                                                                             <-------                                                                                             <-------                                                                                             <-------                                                                                             --------                                                                                             --------             <---------YAB1             ------>MYB83                        <---------YAB1   --------  <---------MYB52(1)                    ------>MYB46(1)                 <---------TOE2(3)   <-------- <-------GAMYB               <-------TEIL --------->TOE2(3)          <---------WOX13(1)     --------- -ZAT6       --------->ICU4 --------->AtLEC2--------->AHL20(2)    <---------YAB1  ------->TEIL<------ ---------->GT1 <---------YAB1         ----------->RAV1(1)     <----------DOF2 <---------WOX13(1)   gtctgttatatagacattattcatgtgtacatgcattataccaacataaatttgtatcaatactacttttgatttacgatgatggatgttcttagatatc  5861900       <---------MYB46(3)       --------->MYB52(2)     <---------MYB52(1)  <---------TOE2(2)  <---------TOE1(2) -->ARR11(3) --CCA1(1) --GLK1(1)                                                          <---------YAB1 --RVE1(1)                                                        --------->YAB1 ->RVE1(1)                                                       <---------YAB1 ->GLK1(1)             <-----------GT1                         <---------ICU4 ->CCA1(1)          ------->TEIL     <---------AHL20(2)       --------->ICU4            <---------ARR11(3) -ARR11(3)      <-------MYC3        <---------AHL20(1) <-----------GT1                  --------->ARR11(3) >ARR11(3)<-----------GT1           --------->AHL20(1) <---------AHL20(2)  ---------->DOF2 <--------- ---ARR11(3)    ------->MYC3      <-----------------AGL3      <---------YAB1   ----------->GT1   ttcatacgtttgtttccacatgtatttacaactacatatatatttggaatcacatatatacttgattattatagttgtaaagagtaacaagttctttttt  5862000  Previous    Next  AGI:  At3g17185.1    Description:  TAS3/TASIR-ARF (TRANS-ACTING SIRNA3); other RNA. expressed protein Range:  from: 5861497    to: 5862443    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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