Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                 <------NtERF2                              ------>NtERF2                              <-----------HVH21                             <---------ANAC46                            --------->RAP2.3(1)                            --------->RRTF1(1)                            --------->ATERF1(1)                            <------NtERF2                           --------->LBD16                           <---------RAP2.3(1)                           ------>NtERF2                           <---------ATERF1(1)                          <---------ATERF1(2)                          --------->DEAR3(1)                          --------->ATERF1(2)                          <---------DEAR3(1)                         --------->ATERF1(1)                         <---------LBD16                        <---------ATERF1(1)                        ------>NtERF2                       --------->ANAC58                --------->HSFC1(2)                                                              <----                <---------HSFC1(2)                                                      --------->ALFIN1                --------->HSFB2a(1)                <---------ZAT18           <---------AHL20(2)<-----                <---------HSFB2a(1)              --------->At4g35610       --------->CCA1(2)  -------                --------->At4g35610              <---------At4g35610      <---------ARR11(3)---------                <---------At4g35610--------->MYB46(3)                  <---------WOX13(1)   ---------          ------->MYC3 --------->ANAC58      <-----------HVH21    <----------DOF2      --------->ZAT14          <-------MYC3 --------->ANAC46------->GAMYB         <---------GLK1(1)        --------->ALFIN1   ------>ZmHOX2a(1) <---------ALFIN1 --------->MYB46(3)     --------->GLK1(1)        <---------ANAC46   ccctccttcgcatatggaagcttccacgccggcgtcaacaacagccccttcagcgaacttagggtttcctttgatagatataatggcagtgtggacgtca  5846200                                                                                              <------                                                                                             --------                                                                                            <--------                                                                                            ---------                                                                                           <---------MYB52(1)                           <---------ALFIN1                                           <---------ALFIN1       <------ZmHOX2a(2)  --------->ZAT14                                       ------>ZmHOX2a(2)   < -----DOF5.7(2)           <---------ZAT18                                      <---------At4g35610 <- ----WRKY12     ------->TEIL              <----------DOF2                      --------->At4g35610--- -->DOF5.7(2)  <---------CCA1(2)          <---------DAG2                      <---------ARR14(2) ---- >ANAC58  <---------MYB52(1)             <---------ANAC58                     --------->ARR14(2)----- >ANAC58------>ZmHOX2a(2) <---------ZAT14<---------ANAC58               <------NtERF2----------->HVH21   acgtctacgatcgttttgtatctcatactacactcgtctaatggctttttcagcattggttttgttttgtaggcctcgttgatctgcccgaccgtttcgg  5846300                                                                                                   --    ------->GAMYB                                                                                 <-- ---RAP2.6(2)                                                                                     --- ->RAP2.6(3)                                       <---------AHL20(2)                            ---- -ARR14(2)                                        --------->AHL20(2)   --------->AHL20(2)      ------ >ARR14(2)                                      --------->TOE1(3)    --------->TOE1(3)         <----- ---------ALFIN1                                --------->TOE2(3)    --------->TOE2(3)      --------- -----NtERF2                                  <---------TOE2(3)      <----------DOF2        <-------- --->NtERF2                                  <-----------GT1<---------AHL20(1)            <---------LBD16 ----->PCF2                                --------->AHL20(2)     <-----------GT1     <-----------GT1 ->NtERF2        ----------->RAV1(1) <-----------GT1        --------->AHL20(1)----------->GT1--------   ccccaagcgcctacattcccaacaaaaaaaaaaaaacatttacattttaacattaaatctaatatttttaactttaaatttagtaaataaaccccgtgat  5846400                                                                                  ===================                                                                          <---------RAP2.6(2)                                                                          --------->ETT(1)    --------->ARR11(3)                                                   --------->RAP2.6(3)    --------->AHL20(1)                                                   --------->ATERF1(1)   ------    <---------AHL20(1)                                                   --------->DDF1        ====== --------->GT1                                                           <------NtERF2  <---------O2 -------HSFB2a(2)                                                       <-----------HVH21    <------- ------>HSFB2a(2)                      ----------->GT1                 --------->ALFIN1 --------->O2- -->ZmHOX2a(2)                     ---------->DOF2                  <---------DEAR3(1)  <---------ANAC46 --->ARR11(3)                 --------->ANAC58                     <---------ORA47(1)  <-------TEIL<- ----ARR11(3)                 --------->ANAC46                    <------ZmHOX2a(1) --------->At4g35610 >LBD16                       --------->ANAC58             <---------ETT(2)       <------ZmHOX2a(1)-- ---HVH21                    <---------LBD16               --------->ETT(2) <------NtERF2    -------- --->HVH21       --------->YAB1--------->LBD16  --------->TOE2(3) ===================================   ctcgaaaatattgtcttattcatattgagtctacggaaaaagagtgaaaaccttgattttgtcgacgaggacggtgtcggcctaggagctacgtggatcg  5846500                              <---------ANAC55(2)                              <---------O2          ==============================bZIP_DOF                                   --------->AtMYB61          ---------->DOF2     --------->O2                                       ----------->RAV1(1)     <------ZmHOX2a(1)        <---------TGA1a                                   <---------ALFIN1    < =HOX2a_HOX2a                 --------->ANAC55(2)                               --------->AtMYB61 <-- >ZmHOX2a(2)                  --------->At4g35610                              <---------MYB55(2) --- ===========HOX2a_HOX2a       <---------At4g35610                              --------->MYB46(3)<--- --ARR14(2)                 <-----------RAV1(2)                              --------->ANAC46  ------ -------->ALFIN1       <---------ZAT14                                    ------->GAMYB        <----- --------At4g35610     --------->ZAT14                                  --------->GLK1(1)   --------- ------->At4g35610     <---------ZAT18    <---------ANAC58              --------->At4g35610 <-------- ->ARR14(2)            --------->ZAT18    <---------ANAC58              <---------At4g35610--------->ICU4 =HOX2a_HOX2a         --------->ALFIN1    <---------AtLEC2   <-----------GT1 <---------ALFIN1 <------   gagcggaggagagaaagacagagagtgtagtcaggtgtctgtttgcatgtcttatctacaatatttcccatcgcaactcccaccaccatagccatcatca  5846600                                                       <---------YAB1                                                     <---------AHL20(2) --------->YAB1                                     <---------AHL20(1) <---------ICU4    <---------ICU4                   --------->AHL20(2) ---------YAB1     --------->YAB1                   --------->AHL20(1) -------ICU4    <---------ICU4                      <---------AHL20(2) ------>YAB1    --------->YAB1                   <---------AHL20(2)           --------------->AtSPL8 ------YAB1  --------->YAB1                    <---------YAB1    <---------WOX13(1) --->YAB1    --------->TOE2(3)            --------->YAB1        <------------CBF ----ICU4 <-----------GT1    <---------ZAT2  --------->YAB1   --------->ICU4  <---------------AtSPL8 >YAB1 <---------ICU4        --------->At4g35610<---------AHL20(2)          <---------TOE2(3)      <- -ICU4<---------YAB1         --------->ZAT2  --------->AHL20(2)--------->ATHB12        --------->YAB1 ---YAB1<----------DOF2      <---------At4g35610--------->AHL20(2) ----------->GT1     ---------->DOF2   tcatcatcatctttaccataatcatcttctcagctctctctcaaaaattataaatttattagtactaattggtaaattaagatgtactataatgcgatga  5846700                                             <---------YAB1                                            --------->AHL20(2)                            --------->ANAC46                                            <---------AHL20(2)                            --------->ANAC55(1)                              <---------ANAC58                                  <---------ANAC58                              <---------ANAC58                                  <---------ANAC58                         <---------------AtSPL3  <---------ICU4                 <---------ANAC46                <---------AHL20(2)         <---------AHL20(2)                ---------->ID1  <-------                --------->AHL20(2)         --------->YAB1                  <-----------RAV1(1) ----------GT1<-----------TBP------->TEIL  --------->AHL20(2)     <----------DOF2      <-------TEIL -   attactagacatgtctatttatatgtgtttgtacgtgtgacttaattaaaattatgccaaaacgttttcttttcattttgttgcttcgatacatgtaacc  5846800                  <---------TGA1a                  <---------bZIP60(2)                  <---------O2                  <---------ANAC58                  --------->TGA1a                                                                   <                  <---------ANAC46                                                              <----                  --------->ANAC55(2)                                                          <-----                  <---------ANAC55(1)                                           ------>ZmHOX2a(2)----                  <---------ANAC58                                     --------->LBD16         ------               ----------->HVH21                                       <---------LBD16         <-----             ===============bZIP_DOF                                  <---------LBD16          ------       <-------TEIL                 <-----------GT1                  <---------LBD16           ------ <---------AHL20(2)  <-----------HVH21                             <---------ARR14(2)          <----- ----GT1     <----------DOF2 ----------->GT1                       --------->ARR14(2)      ---------- -------->AHL20(2)--------->O2    --------->ICU4         <-----------GT1   <---------KAN4(2)  -------   tatttaatgtgcattctttgacgtgtccagcctgtaattatctacatagtttgaagttattaccctctaaatccggggatgatccctctgaataaaagat  5846900 ---------MYB52(1) --ZmHOX2a(2) ----AGP1                                                                                           < -->ZmHOX2a(2)                                                                                     <- --->AGP1                                                                                 --------->CCA1(2) ----ARR14(2)                                                                            --------->AHL20(1) --->ARR14(2)                                                                            <---------AHL20(1) --->ARR11(3)              <-----------RAV1(1)                                           --------->ARR11(3) ----ARR11(3)          <---------AHL20(2)                                           --------->AHL20(2) >DOF2                --------->AHL20(2)                                    --------->AtMYB61    <--- -->RVE1(1)     <-----------GT1                    --------->ALFIN1   ---------->DOF2   --------->AHL20(2)   ctgttactccgatttgaataaccattaatttgttgccaatttgaaattagggggaggggaatagttttgagggaaagaccacaagataaaatatataggc  5847000 <-------GAMYB                                             <---------ZAT6 <---------ANAC58                                          ----------->GT1 <---------ANAC58                                 <---------AHL20(2) ---------MYB46(3)                                --------->AHL20(2)             <-----------GT1 --------AtMYB61       --------->YAB1       <---------ANAC55(2)              <---------DAG2 -------DOF2  ----------->GT1  ------->TEIL --------->ANAC55(2)              <----------DOF2   tttggttgtgctaaatgtgtaacaataaacatgtatcaaatttgataagtatttatatatagagataaatagtcatatactttttacatctagtcaaaca  5847100  Previous    Next  AGI:  At3g17140.1    Description:  invertase inhibitor-related. similar to C/VIF1 (CELL WALL / VACUOLAR INHIBITOR OF FRUCTOSIDASE 1), pectinesterase inhibitor [Arabidopsis thaliana] (TAIR:AT1G47960.1); contains InterPro domain Pectinesterase inhibitor; (InterPro:IPR006501) Range:  from: 5846008    to: 5846595    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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