Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                                -------                            --------->TOE2(3)              --------->YAB1                     -------                       <---------ANAC58                   <<<<<<<<<ARR1                       -------                       <---------ANAC58                   <---------ATHB12                  ---------                <---------YAB1                 <---------TOE2(3)                     <------ZmHOX2a(1)             --------->GLK1(2)    --------->AHL20(2)      <<<<<<<<<ARR2            <---------TOE2(3) ------HVH21<---------GLK1(2)     <---------AHL20(2) --------->ZAT6         --------------->AGL15   -   cacatcaaattccagactctgatttgcataccctaataaaacatgtactaatgtaacacaatcatattgggatttagacttaatttaggaatgagaaagc  5840700                                                                              <---------DAG2                                                                            ------>MYB83                                                                            ------>MYB46(1)    --------->ALFIN1                                                   <---------WRKY18(1) --------->DAG2                                                       --------->WRKY45 -->ANAC58                                                            --------->WRKY12 -->ANAC58             <-------GAMYB                                  --------->WRKY38(1) ---->GT1             <---------MYB46(3)                          <---------ARR11(3) ->DOF2               --------->MYB111(2)                         --------->ARR11(3) --------->DOF2      <--------P------->TEIL                   ---------->DOF2 <----------DOF2     <--   aaaaaagtgtgagacaaaacgaggttgttgacgaatttgactacgatgagaccccaaaaaaaaaaaaagatgttgaccaactttttaagactgtatggtt  5840800                                                                                           --------->PCF2                    ----------->GT1                            --------->AHL20(2)  <---------ZAT2                    <-------GAMYB                             <---------ARR11(3)   <---------At4g35610                   ----------->GT1                            <---------AHL20(1)   --------->At4g35610          <---------CCA1(1)                                   --------->ARR11(3)   <-------GAMYB          <---------RVE1(1)                                   --------->AHL20(1)  <---------MYB46(3)<         <---------ARR11(3)                   --------->MYB52(1)   <---------AHL20(2)  <---------ANAC46         --------->ARR11(3)       --------->ARR11(3)       --------->AHL20(2)   <------NtERF2-------- -------YAB1    <---------LBD16   <---------ARR11(3)  ----------->GT1        <------ZmHOX2a(1)<------   ctgaatattcagatattttgggggttaaaatcgaaagatttgtatagttaagggactagataaaaatatttaagtgcgaggaggcagttgagggaaccac  5840900                                                                                               <----- <-------GAMYB                <---------ZAT14                    <----------ID1                <----- -----------RAV1(1)    <---------AHL20(2)             <---------ZAT6                     <------ZmHOX2a(1) ->MYB46(3)           <---------AHL20(1)            --------->YAB1<---------PCF2       --------->MYB59 ---ALFIN1           <---------CCA1(2) <-----------RAV1(2)--------->YAB1        <-----------------AGL1   ttctgttgaagtctgtcattttcatatatttgtaaactgggccagatagatttatagtgatcaaaatgggaccaattgatttttcaaattaggacaatat  5841000                                                                     --------------->AGL15                                                                     <---------------AGL15 <---------ANAC58                                              <---------------AtSPL8 <---------ANAC58          ------------>CBF                    --------------->AtSPL8 ----AHL20(1)    <------------CBF                         <---------YAB1 ----ARR11(3)  <---------YAB1  --------->GLK1(2)        --------->YAB1 --------->AHL20(2)   atgtcgtctctgtatttgtcattgtctattccaattctgttctggtcttgattttttcttataattttgtacataaattagcaaaacttagttttgtttc  5841100                               --------->YAB1                     --------->ARR11(3)                     <---------ARR11(3)                    <---------CCA1(2)                   <---------AHL20(1)                                                  ---------->DOF2                   --------->AHL20(1)                                       ---------->DOF2                   --------->ARR11(3)                                     <------ZmHOX2a(2)                   <---------ARR11(3)                          ---------->DOF2         ==============  *TSS        --------->AHL20(2)                              --------->AHL20(2) ----------->GT1 ----------->GT1--------->AHL20(2)   --------->MYB52(1)  --------->AHL20(2) =========================   caagggaaaaaaccaaaaaaatatatcttacaaacaaaataagggtgcaaaacgtataagaaaataaaagaatgggatcaaagtggaataaaagaatatt  5841200                <---------HSFC1(2)               ----------->ARR10            --------->ALFIN1            ----------->HVH21          ====================================bZIP_DOF          <---------TGA1a          <---------bZIP60(2)          <---------bZIP60(1)          --------->bZIP60(1)          --------->TGA1a          --------->ANAC55(2)          <---------ANAC55(2)          <---------ANAC58          <---------ANAC58          <---------ANAC46          <---------ANAC55(1)          <---------O2          --------->O2         ----------->STF1        <---------TGA2(2)       ----------->TGA1       ----------->HVH21      <-----------HVH21     <---------MYB46(3)                        <---------ANAC58     <---------DEAR3(2)                        --------->ANAC55(2)    <---------At1g77200                        <---------ANAC46    <---------DEAR3(1)   <---------ANAC46      <---------ANAC58   --------->ATERF1(1)  --------->ZAT2        <-------TEIL   <------NtERF2--------->HSFC1(2)  --------->DAG2                                ----------->RAV1(1)  <-----------HVH21     <---------ZAT2--------->At4g35610                        --------->MYB46(3) <---------ANAC58       <---------At4g35610 <-------MYC3           <---------------AGL15 <---------DEAR3(1)     --------->At4g35610 ------->MYC3           --------------->AGL15 <---------ANAC58    <---------At4g35610   <---------TGA1a        <-----------------AGL3 ===================bZIP_DOF       ==================bZIP_DOF    <---------At4g35610   ------->MYC3 ===================bZIP_DOF       ---------->DOF2               --------->At4g35610   <-------MYC3   agggcgtcggtgacgtgaagcttcgctgctgggagaaaaaagctcacatgcgtattatctcagtctcagctatatttagaacaacaacacatgtctgaac  5841300                                                                  <---------YAB1                                                                --------->YAB1                                                               <---------YAB1                                                         <---------ICU4                                                         <--------ATHB1                                                         -------->HAHB4                                         <----------DOF2<---------YAB1                                         ------>ZmHOX2a(1)   --------->YAB1   --------->ATHB12                                      ---------->ID1    --------->ICU4    <---------AHL20(2)             --------->ARR14(2)     ------>ZmHOX2a(1)   <---------ATHB51  --------->ATHB12             <---------ARR11(3)   ----------->RAV1(2) --------->YAB1  <---------AHL20(2)            <            <---------CCA1(2) --------->ARR14(2)     <---------AHL20(2)  <---------YAB1             -          ------>ZmHOX2a(1)  <---------CCA1(2)      --------->AHL20(2)--------->AHL20(2)           <-   acattacagttcctatatctgtttcgaattcaaatctcctgtccttttttcatatataataattcatcataaatatttattgatttgattctatctctta  5841400                              --------->DAG2                 --------------->AGL15                 ------>ZmHOX2a(1)                 --------->LBD16               ----------->RAV1(2)           ------>ZmHOX2a(2) ---------->DOF2           =============HOX2a_HOX2a                                                              <---     <-----------GT1    <----------ID1           ------->TEIL                        --------->ATHB12 <---------AHL20(2)     ----------->GT1--------->HSFB2a(1)              <-----------GT1         <---- ---------AHL20(1)    ----------->GT1  <---------HSFC1(2)           <---------AHL20(2)         <----- -------->AHL20(1)  ---------->DOF2    <---------HSFB2a(1)   --------->ARR11(3)   <---------ANAC58 --------AHL20(2)<---------------AGL15 --------->HSFC1(2)    <---------ARR11(3)   <---------ANAC58 <-   tatatattttcgatctctcctgaaaagagaaaaaagttggaaacttcgacgaatgtgtttataaatctttttattttctatctgtcttgatttagtttta  5841500                                                                                           ------>ZmHOX2a(1)                                                                                 ------>ZmHOX2a(2)                                                                                 =================HOX2a_HOX2a                                                                                <------ZmHOX2a(2)                                                                                ==================HOX2a_HOX2a                                                                               --------->ARR11(3)                                    --------->LBD16                            <---------ARR14(2)                                    ------>NtERF2                              --------->ARR14(2)                                   --------->ANAC58                            <---------AGP1                                   --------->ANAC46                            <-----------ARR10                                   --------->ANAC58                           <---------ARR14(1) --------------AGL1             <---------ARR14(2)                        <---------ARR14(2)       <- -------GT1                     --------->ARR14(2)                        --------->ARR14(2)       <- ------GT1                      --------->GLK1(2)          <---------At4g35610<---------CCA1(2) <---- ---------DOF2             ---------->DOF2      ------>ZmHOX2a(1)    --------->ZAT14  <---------GLK1(1)   tcttttttggaatcggtctgaagttggacaaaagaatccgccattttctcctcggtctctctgctcttctcttcagtatcggatctgggtctccttcgct  5841600  Previous    Next  AGI:  At3g17120.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT4G01960.1); similar to hypothetical protein MtrDRAFT_AC173289g6v1 [Medicago truncatula] (GB:ABN09095.1) Range:  from: 5841102    to: 5843491    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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