Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                   <---------AHL20(2)                                             --------->AHL20(2)                 <---------AHL20(2)                        ---------->DOF2      <---------AHL20(2)              <---------AHL20(1)           --------->TOE2(3)                --------->AHL20(2)            --------->YAB1           --------->TOE1(3)        <---------HSFC1(2)                    --------->AHL20(2)       <-          ----------->GT1--------->DAG2<-------TEIL                     --------->AHL20(2)         <-         <---------TOE2(3)          <---------HSFB2a(1)             --------->YAB1                 <- ---->WRKY12        <----------ID1  --------->HSFC1(2)        ------>ZmHOX2a(2) --------->AHL20(2)--- ---->WRKY38(1) ---------->DOF2<---------HSFB2a(2)            --------->YAB1 --------->AHL20(1)   <-- ----DOF2<---------TOE1(3)    <---------At5g28300--------->AHL20(2)----------->GT1      ---------->DOF2   gactgccatataacgttaaaaagagaaaaagttaccgaaggttcaaattaataaatgaagttgatcgtaatgaaaataatatttttttaaaaaagaaggg  5800100                                                                --------->ZAT6                                                             <---------------AGL15                                                             --------------->AGL15                                                 --------->ARR14(2)                                                 <---------ARR14(2)                                                 <---------ARR11(3)                                                 --------->ARR11(3)                                            <---------LBD16 ----------------->AGL2         <---------      ---------->DOF2                <---------ICU4   <-----------RAV1(2)            <---------ANAC46   <------NtERF2                    --------->ICU4 ------>ZmHOX2a(2)                 <---------ANAC58 -----MYB83                         <---------YAB1<------ZmHOX2a(2)                  <---------ANAC55(1) -----MYB46(1)                      =====================HOX2a_HOX2a                 --------->ANAC55(2) --------MYB46(3)          --------->WOX13(1)   --------->GLK1(1)                    <---------AtLEC2 ------>ALFIN1       ---------->DOF2======================HOX2a_HOX2a                <---------ANAC58 -------AtMYB61 ----------->GT1     ------>ZmHOX2a(1)------>ZmHOX2a(1)          <----------DOF2   atggtggcaaaagaagctaagttaaaagtctatcagtccttattgctcagggatcctcaggtactaaaactagcaaacactgcttttgcgtgtctttgaa  5800200                                                                       ----------->HVH21                                                                     ====================bZIP_DOF               <------------CBF                            ====================bZIP_DOF            ------------>CBF                               <----------DOF2    <---------DAG2    -----           ------->GAMYB               --------->AHL20(2)  <---------WOX13(1) <----------DOF2   -----   <---------RVE1(1)                  ----------->TBP <----------DOF2<---------ANAC55(2)     <-------  --------->ARR11(3)               <---------YAB1     =========================bZIP_DOF   --------->YAB1  <---------GLK1(2)     <---------At4g35610 --------->AHL20(2)       --------->TGA1a--------->ZAT6 <- -DOF2  <-----------GT1 --------->At4g35610--------->AHL20(2)        --------->ANAC55(2) <---------YAB1   gtcagatttttaacagcaattgtttcatctgcctattactataaaataaaaaaacactttgatttatgggaacgtgactgctttttccactattataacc  5800300                         <-----------------AGL3           <---------TOE2(3)               <----------DOF2 ---->TOE1(3)  ---------->DOF2     --------->ARR14(2)      --------->ZAT6        <---------ARR14(2) ---->TOE2(3)--------->YAB1        <---------ARR14(2) --------->YAB1      --------->CCA1(2) ----GT1 <---------AHL20(2)  <---------ARR14(2)     <-----------TBP      --------->ARR11(3) --------WRKY18(1)       <-------TEIL      <---------DAG2<-----------GT1 <---------ARR11(3)    ------   ttgactcgtttttaatgaaaagaagcatacatatttggatactcacttttgcccatttataacaccagagagagagatatagggatagggcgagagagag  5800400                              <---------YAB1                           <---------ARR14(2)                           --------->ARR14(2)                           --------->GLK1(2)                         --------->HSFB2a(1)                         <---------HSFC1(2)                         --------->HSFC1(2)                         <---------HSFB2a(1)                       <------ZmHOX2a(1)                                                           <-    ---------->DOF2  --------->ALFIN1                                     ----------->GT1         --- ----->GT1        <------ZmHOX2a(1)    --------->CCA1(2)     --------->CCA1(2)>>>>>>>>>MYB98------>ZmHOX2a(2)   ttatactaaagaaacttgaaggagaggaggttctgagtgagatagaagaaggaagagagagagagatgggtaagagtagtaacatagtttttgatcggat  5800500                                                         ----------->HVH21                                                       ------>ZmHOX2a(1)                                                       --------->At4g35610                                                <------ZmHOX2a(2)                      <---------DAG2           --------->ARR11(3)            --------->At4g35610                --------->ARR14(2)            <---------At4g35610                <-----------ARR10          <-----------RAV1(2)                  <---------ARR14(2)       --------->ANAC58                        <---------ARR11(3)       --------->ANAC58                        <---------AGP1                                    ----      --------->RAP2.6(3)                      --------->AGP1                          <----------DOF2     --------->ARR14(2)                       <---------CCA1(2)<---------AtLEC2     --------->ARR11(3)     <---------ARR14(2)        <---------ARR11(3)=============HOX2a_HOX2a           <---------ARR11(3)     --------->MYB52(1)        --------->ARR11(3)------>ZmHOX2a(2)                 <---------CCA1(2) --------TOE2(3)      <----------DOF2         --------->At4g35610    <---------DOF5.7(2)        ----- ------->DOF2--------->ARR11(3)<---------GLK1(2)==============HOX2a_HOX2a          <---------GLK1(1)-   taaagaagaacggcagatgttgagctttttcaagatttttcagagggcagatctatcctctgactgcatggtaacgttgttcttgatatctttgtttgaa  5800600        <----------DOF2                                                                             <     <---------ARR14(2)                                                                         -----     --------->GLK1(2)                                                                          ----- ----->DAG2                                             <----------DOF2       --------->ATHB12  <---- ----->DOF2                                --------->ANAC46                   <---------ICU4<-------- -------->ALFIN1 <----------DOF2          <---------LBD16          <----------DOF2   <---------At4g35610   aagtgggaatctttttcttctttttgttgaatgggtttcaagtctacggcttattcatcttttggttctctttgttttaaagattgcaactgtttttcct  5800700         <---------ANAC58         <---------ANAC58        <---------TOE2(3)                                              --------->HSFB2a(2)    <----------DOF2                                                <---------GLK1(2) ------->TEIL                                        <----------DOF2   <---------HSFB2a(2) ---------CCA1(2)                            <---------LBD16      --------->At4g35610 ---->At4g35610                       <---------MYB52(1) <---------TOE2(3)              <---------TOE2(3) ->ZmHOX2a(1)                       =====================RAV      <---------At4g35610<----------DOF2 -----At4g35610     <----------DOF2 <-----------RAV1(1)  <---------TOE1(3)   <-------GAMYB ---GT1<-----------GT1           ------->TEIL----------->RAV1(2)  <---------ZAT2  ------->TEIL<------   ctgaatcttttacgttctctgtctttgaaacgttgaatctgttgtttccctggtgttttaagggtctcagcttctcgagggttgaatctttaggttctgt  5800800                                           ------>ZmHOX2a(2)                                         --------->ARR11(3)                 ----------->GT1         <---------ARR11(3)               ------>ZmHOX2a(2)         --------->ARR14(2)              <------ZmHOX2a(2)          --------->AGP1             <---------ARR14(2)          <---------AGP1             --------->ARR11(3)          <---------ARR14(2)             <---------AGP1             <---------CCA1(2)             --------->ARR14(2)        ----------->ARR10             --------->AGP1            --------->MYB59             <---------ARR11(3)   --------->DAG2                                      ----------->GT1            <---------CCA1(2)    ---------->DOF2                             ----------->GT1           --------->MYB59   --------->AHL20(2)                        <---------TOE2(3)     ---------->DOF2    --------->AHL20(2)<------ZmHOX2a(2)    <----------DOF2     ------->TEIL ---ANAC46 ----------->ARR10--------->AHL20(2)      <----------DOF2  <---------AHL20(2)   gtgttttaaaagttagatcttgtaaaaaaaataaaaaaagttagatcttgttagcttttggctgtctttgtttaatgaaaggttgaatctgttaaatctc  5800900              ----------->HVH21       <---------ANAC58                       <---------At4g35610       <---------ANAC58                       --------->At4g35610      <---------TOE2(3)             <---------MYB52(1)     <-----------GT1           ------->TEIL   --------->ZAT14                   <---------ZAT14------  <---------ICU4  <----------DOF2 <-----------RAV1(1)                    <----------DOF2     --------   tgaatatttacgttctctgactttgaaacgttgaatctgttgtttctctgctctcaagactcttaacagtttaatctttgagttctctgtgttttaaaag  5801000  Previous    Next  AGI:  At3g17010.1    Description:  transcriptional factor B3 family protein. similar to transcriptional factor B3 family protein [Arabidopsis thaliana] (TAIR:AT5G18000.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO47720.1); contains InterPro domain Transcriptional factor B3; (InterPro:IPR003340) Range:  from: 5800466    to: 5802474    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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