Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                               <---------ANAC46                            <------NtERF2                            --------->RAP2.3(1)                           ------>NtERF2                          --------->ANAC46                          --------->DEAR3(1)                          --------->RAP2.6(2)                          --------->RAP2.3(2)                         --------->RAP2.3(1)                         --------->ERF1                         --------->MYB46(3)                         --------->DEAR3(2)                         --------->ATERF1(1)                        <---------ATERF1(1)                     --------->REM1(2)    <----------ID1<---------ANAC58    --------->ANAC58<---------REM1(1)    --------->ANAC58--------->ALFIN1 ---->ZmHOX2a(2)  <---------O2 ----ZmHOX2a(2)   --------->O2 ----->ARR14(2)   <---------TGA1a ------ARR14(2)   <---------ANAC55(1) -->ANAC55(2)     <---------bZIP60(2) -->ANAC58        <---------ANAC58 -->ANAC55(1)     <---------ANAC55(2) -->ANAC58        <---------ANAC46                 <---------YAB1 ---ANAC55(2)   <---------TGA2(2)              <---------ANAC58     --------->AtMYB61 --LBD16       ----------->HVH21         --------->SPL7     <-------MYC3 ->HVH21       ----------->TGA1         --------->MYB52(1)  ------->MYC3                           << -HVH21  ===================bZIP_DOF   <---------SPL7--------->WOX13(1)                       <------ -TGA1   ---------->DOF2<---------At4g35610    <---------ANAC58    <------ZmHOX2a(2)          <------   atcgagacgacaaaagcatgacgtgtagccgccgtatagatcgaacggtgcttatcaatccatgtgtcgatcacccctctcttctccattgaaattgctt  5796800                                                                                           ------->MYC2                                                                                           <-------MYC2                                                                                           ------->MYC3                                                                                          --------->ANAC58                                                                                          --------->ANAC58                                                                                         ------->TEIL                                                                                    =================                                                                                    <---------ANAC58                                                                                    <---------ANAC55(1)                                                                                    --------->TGA1a                                                                                    <---------O2<----                                                                                    <---------TGA1a                                                                                    <---------bZIP60(2)                                                                                    <---------ANAC46                                                                                    <---------ANAC58                                                              <----------DOF2    ----------->HVH21                                                        <---------WRKY38(1)     <-----------HVH21                                                        <---------WRKY12  <---------MYB52(1)   ------     <----------DOF2                                    *TSS  ================================bZIP_DOF <<<<<<<TBF1                                          <-----------HVH21  <-------GAMYB <-------TEIL ---ANAC58                                     --------->ARR14(2)        =====================MYC_MYB ---ANAC58                            <<<<<<<<<TBF1<---------At5g28300  <-----------RAV1(1)<-------MYC3   cttcttcctttctctcaagactcaagactcaagactcttcttcttcaccgattcactgtcaacgctttgattttctgttgtctgtgacgtgcacgtttca  5796900          <---------AHL20(2)                          <---------GLK1(2)         <---------AHL20(2)                          <---------ICU4         --------->AHL20(2)              --------->ANAC58      --------->AHL20(2)                 --------->ANAC58     --------->AHL20(2)                 ------>NtERF2-------->HAHB4         ---------->DOF2   <----------DOF2                  --------->ANAC46 <--------ATHB1      <----------DOF2 =============bZIP_DOF              --------->ANAC58<---------ATHB12   --------->At4g35610        <-- --------CBF                        --------->ANAC58<---------YAB1    ------>NtERF2   <----------DOF2 --->ATHB12    <----------ID1---------->DOF2        --------->ICU4   <---------DEAR3(1)           ---   ttgggctttaaattaatgggccaaggcctattaaagtctcgccacgatagcttaatgattctcccaaatcgacggctgtaaagaggcgcttaaatttctc  5797000                                                                                           --------->ARR14(2)                                                                                           ------->TEIL                                                                                        <---------O2                                                                                        --------->O2                                                                                        <---------TGA1a                                                                                        --------->TGA1a                                                                                        <---------ANAC55(2)                                                                                        --------->ANAC58                                                                                        --------->ANAC55(1)                                                                                        =============                                                                                        --------->ANAC55(2)                                                                                        --------->ANAC58                                                                                     ----------->HVH21                                                                                    <-----------HVH21                                                                                    <-----------TGA1                                                                                   <---------bZIP60(1)                                                                                   --------->ANAC58                                                                                   --------->O2                                                                                   ==================                                                                                   <---------O2            --------->GLK1(2)                                                      <---------TGA1a           <---------GLK1(2)                                                       --------->bZIP60(2)      ------------>AtMYB77                              <---------ANAC46           --------->bZIP60(1)     ----------->HVH21                                  <---------ANAC55(2)        --------->TGA1a   <---------ANAC55(1)                                  <---------ANAC58           --------->ANAC55(1)   --------->ANAC55(2)                                  --------->ANAC55(2)        --------->ANAC58   <---------ANAC58                                     <---------O2               --------->ANAC55(2)   <---------ANAC55(2)                                  <---------bZIP60(2)        <---------ANAC55(2)   --------->bZIP60(1)                                  <---------ANAC55(1)        --------->ANAC46   <---------bZIP60(1)                                <-----------GT1      --------->ARR11(3)   <---------ANAC58                       <---------TOE2(3)                <---------ARR11(3)      --   <---------ANAC46        --------->ARR11(3)      <---------ICU4         --------->At4g35610 -------   <---------O2            <---------ARR11(3)     --------->AHL20(2)   <---------At4g35610 <---------ARR14(2) -------At4g35610     <---------MYB52(1) ---------->DOF2<---------ANAC58<---------GLK1(2) <---------CCA1(2) ------>At4g35610 ------->TEIL    <---------AtLEC2<---------AHL20(2)  ----------------------->TaNAC69(2)   agattacgtgacagtttctgaaccgttgagatgtttggatgactaaagtttattaattacgtggcacttactcagaagctctctcacgtcacgtatccgt  5797100            <---------ANAC46            <---------ANAC58            <---------ANAC58            --------->TGA1a            <---------O2                                                                <---------O2            <---------ANAC55(1)                                                         --------->O2            --------->O2                                                             *TSS  ----------            <---------TGA1a                                           <---------At4g35610------->MYC3         ----------->HVH21                                       <---------ICU4    --------->ANAC58         ----------->TGA1                                       --------->ICU4     --------->ANAC58        <-----------HVH21                                   --------->ZAT14    <---------HSFB2a(2)       --------->ALFIN1                 <---------ANAC46    <---------ZAT14    --------->HSFB2a(2) =====================bZIP_DOF          <---------ANAC58    <---------SPL7 <---------At4g35610 ---------->DOF2                        <---------ANAC58  --------------->AtSPL3 --------->LBD16 ===========bZIP_DOF                  <---------ANAC46    --------------->AtSPL8--------->LBD16 ===========bZIP_DOF             <---------AHL20(2)      <---------At5g28300  <---------LBD16 ------->DOF5.7(2)              --------->AHL20(2)      <-----------GT1    --------->At4g35610     <- -->ANAC46  <---------bZIP60(2) <---------AHL20(2)  <---------AHL20(2)--------->At4g35610<-------MYC3   cgttaaagagtgtgacgtggaaaatgttttggaattaattttgtgtgtttgtattatatcaccgtactaattagctcatctcccgaagccatgtggtaat  5797200                                                                <---------ZAT18                                                                <---------ZAT14                                                                --------->ZAT18                                                             <---------ARR14(2)                                                            <------NtERF2                                                          <---------ANAC46                                                         <------NtERF2                                                         <---------At4g35610                                                         <---------LBD16                                                         --------->ATERF1(1)                                                        <---------ERF1                                                        <---------ATERF1(1)                                                        <---------RAP2.6(1)                                                        <---------RRTF1(1)                                                        <---------RAP2.3(1)         --------->ALFIN1                                                        <---------DEAR4(2)        <---------O2                                                        ------>NtERF2             <---------ANAC58                                                       <---------RRTF1(2)         <---------ANAC46                                                       <---------RRTF1(3)         <---------ANAC58                                                       <---------DEAR3(1)       ------>ZmHOX2a(2)                                                       <---------RAP2.3(3)     <------ZmHOX2a(2)                                                       <---------RAP2.3(2)    --------->ARR14(2)                                                       <---------ATERF1(2)    <---------ARR11(3)                                                       --------->ATERF1(2)    --------->ARR14(3)                                                       --------->DEAR3(1)     <---------ARR14(2)                                                      --------->ATERF1(1)     <---------AGP1                                                      <---------ABI4(1)       --------->ARR11(3)                                                     --------->LBD16   <---------ETT(1)                                                     <---------ATERF1(1)------>NtERF2                                  --------->ARR14(2) <---------RAP2.3(1)--------->LBD16                 <---------AHL20(2)                  ------>NtERF2     <---------HSFB2a(2)               <---------YAB1     ------->TEIL  <---------GLK1(1)      --------->ATERF1(2)            --------->ICU4        --------->GLK1(2)<---------LBD16     --------->HSFB2a(2)     <---------ANAC46    <---------MYB52(1)     --------->GLK1(1)      <---------ATERF1(2) ->GT1      --------->AHL20(2)<---------------------WRI1<---------ORA47(2)    <---------ARR14(3) --------YAB1<---------AHL20(2)   <---------ARR14(2)<---------DEAR3(1)<---------LBD16  ----------->GT1   tctaattttgtgtatttattattttctgttaagacgaatcggacagagagaactccggcggcggattgcacttccggcaagatctcgtggggataaataa  5797300                                   ----------->HVH21                                  --------->At5g28300                                  <------NtERF2                                 <---------MYB46(3)                                <---------DEAR3(1)              <---------KAN4(2)<---------ABI4(1)           ----------->GT1    --------->LBD16                             --------->GLK1(2)    <-------GAMYB           <---------LBD16                       <-------TEIL    <------NtERF2         --------->GLK1(2)                <---------TOE1(3)   <---------MYB46(3)     --------->ARR14(2)        <------ZmHOX2a(1)--------->ANAC58               <  <---------ANAC58        <---------ARR14(2)     <-----------RAV1(2) --------->ANAC58               -  <---------RAP2.6(2)   --------->HSFC1(2) --------->ARR14(2)  --------->At4g35610       <---------AHL20(2)  <---------ANAC58      <---------HSFC1(2)<------ZmHOX2a(1)<---------TOE2(3)        <---------YAB1  =  <---------ANAC46      --------->HSFB2a(1)--------->ARR11(3)  --------->GLK1(1)  <---------At4g35610 <---------LBD16        <---------HSFB2a(1)<---------ARR14(2)<------ZmHOX2a(1)<-----------HVH21     <   gatggcggatgagaggtataatcggaagaatccggcggtgaagaggattttgcaggaggttaaggagatgcaagctaatccgtctgatgattttatgtct  5797400              --------->ARR11(3)              <---------ARR11(3)        ----------->GT1       <---------TOE2(3)              <---------LBD16  ------>ZmHOX2a(1)                 <---------ARR14(2) ------->TEIL                   <---------ARR14(2) <---------------AGL15              --------->ARR14(2) --------->GLK1(2)  <----------DOF2 --------------->AGL15       <----------DOF2          <---------ARR14(1)  --------------->AGL15 -----------------AG <---------GLK1(2)------>ZmHOX2a(2)<---------ARR11(1) <---------------AGL15 ---------------->AGL1       <---------DAG2    <---------YAB1           ----------------->AGL1 =========================================================================================MADS_MADS < -----------------AGL1--------->GLK1(2)--------->HSFB2a(2)            <-----------GT1 --------->ARR14(2)   cttcctcttgaggtaacatctccgattctagctttttagatcgggaattttgattcgaatctatatttgaaatttccttttttgagaaaatccccttgtc  5797500                                                                            <---------ICU4                                                                            --------->ATHB12   ------                                     ------->TEIL                          --------->ICU4      <-----                                    <---------CCA1(2)                    --------->YAB1<---------ARR14(2)                  <-----------RAV1(1)--------->ARR14(2)                  <---------ICU4--------->ARR14(2)                <---------ANAC46  <---------ANAC58                      =====================HOX2a_HOX2a             <-----------RAV1(1)  <---------ANAC58  <---------AtMYB61   --------->ICU4<------ZmHOX2a(1)        <---------ZAT6      <---------YAB1   <---------YAB1             <------ZmHOX2a(2)     <------ -----------RAV1(1)  <---------ANAC46<---------ARR14(2) <---------MYB46(3) <---------YAB1------>ZmHOX2a(2)   ttatgttgttgtgttatgttgtgttgtgttgtaattgtgtatctgttctgagtgatggtgtttgattttaggcgatcatgattagggaggatcgatatat  5797600                                                                                                  ---                                                                                                -----          --------->ANAC46                                                            --------->MYB52(1) --->ARR11(3)                          --------->ZAT6   --------->DAG2       --------->ATHB12   <---- ----ARR11(3)                          <---------ALFIN1---------->DOF2      <---------AHL20(2)  ----- ---CCA1(2)      <-----------GT1 <----------DOF2----------->RAV1(1)         <---------YAB1      <----   cttcttgtatacactgaatttactaagtctctctactttcaacactcgtgcaacagataaagtttggatttttgtgtttttattggaataactgagtcaa  5797700  Previous    Next  AGI:  At3g16990.1    Description:  TENA/THI-4 family protein. Identical to Seed maturation protein PM36 homolog [Arabidopsis Thaliana] (GB:Q9ASY9;GB:Q8LBN8); similar to unnamed protein product [Vitis vinifera] (GB:CAO44900.1); contains InterPro domain TENA/THI-4 protein/Coenzyme PQQ biosynthesis protein C (InterPro:IPR004305); contains InterPro domain Haem oxygenase-like, multi-helical (InterPro:IPR016084) Range:  from: 5795840    to: 5796856    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At3g17000.1    Description:  UBC32 (UBIQUITIN-CONJUGATING ENZYME 32); ubiquitin-protein ligase. similar to UBC34 (UBIQUITIN-CONJUGATING ENZYME 34) [Arabidopsis thaliana] (TAIR:AT1G17280.2); similar to UBC34 (UBIQUITIN-CONJUGATING ENZYME 34), ubiquitin-protein ligase [Arabidopsis thaliana] (TAIR:AT1G17280.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN72172.1); contains InterPro domain Ubiquitin-conjugating enzyme, E2; (InterPro:IPR000608); contains InterPro domain Ubiquitin-conjugating enzyme/RWD-like (InterPro:IPR016135) Range:  from: 5797185    to: 5799689    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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