Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                                 <-----                                                                                              <------NtERF2                                                                          ----------------->AGL1  <--                                                                     <---------ALFIN1        --------                         <-----------GT1                         --------->MYB46(3)         ---------                    <----------DOF2                             --------->ANAC58           <---------LBD16               ------>ZmHOX2a(1)                                ------>MYB46(1)      <---------HSFB2a(1)             <---------HSFC1(2)                                 --------->ANAC58    --------->GLK1(1)             --------->HSFB2a(1)          --------->WOX13(1)    ------>MYB83  <---------ARR14(2) <---             --------->HSFC1(2)          <---------ICU4         --------->ANAC46    <---------GLK1(1) ->GLK1(1)  <------ZmHOX2a(2)           <---------YAB1        ---------->DOF2 --------->ARR14(2)-----   aacatcccatttcgatccttctcttttaaaccattctatttcatcattcaacgatgctataccaccaagcaccacttccatatcggaactctcgccggaa  5796500                                                                         --------->ANAC58                                                                         --------->ANAC46                                                                   <---------------AGL15                                                                  <-----------------AGL1      <---------ZAT2            --------->ANAC58                  ----------------->AGL1     --------->ANAC58           --------->ANAC58             <---------ICU4     --------->ANAC58         --------->MYB52(1)           --------->GLK1(2)         <---------ANAC46 ----GLK1(2)                <---------MYB52(2)             --------->ARR11(3)   --------->MYB52(1) -------ICU4           --------->ANAC46                 <---------GLK1(2)--------->ANAC58 ->LBD16               --------->ANAC58               ----------->GT1 <---------REM1(2) >LBD16                --------->ANAC58          --------->ANAC58 =================================== ------HSFB2a(1)  ------->GAMYB --------->ANAC46 --------->ANAC58 <---------------AGL15 ---->GLK1(2)    <---------ALFIN1             ------>ZmHOX2a(1)   --------------->AGL15    ----------   tctttgcaagctctgatcaacacactcgctacaaacggcacaaacctcctcacgaacagataatcttgcccctacaaggaaacaacgtcgtttaaaagtc  5796600                                                                                              -------                                                                                              <------                                                                                              -------                                                                                              -------                                                                                              -------                                                                                             <-------                                                                                           <---------MYB52(1)                                                                                           ----------                                                                                          <----------                                                                                          <----------                                                                                         <---------ANAC55(2)                                                                                         --------->ANAC55(2)                                                        ------>MYB83                     --------->ANAC46                                                        ------>MYB46(1)                 ------>ZmHOX2a(2)                                                       --------->ANAC46               <---------ARR14(2)                                                --------------->AtSPL3                --------->ARR14(2)                                                --------->ZAT6                   --------->MYB52(1)                                               <---------At5g28300    ================HOX2a_HOX2a                                              <-----------GT1         =========================HOX2a_HOX2a                                           <---------ICU4     <---------ARR11(3)<---------WRKY12   --                                          <---------------AGL15       ========================HOX2a_HOX2a                                          --------------->AGL15       ===============================                     <---------ANAC58    ----------------->AGL3       ===============================                     <---------ANAC58  <-----------GT1 --------->ANAC58        <------ZmHOX2a(2)  <--                  <-----------GT1     --------->ICU4   --------->ANAC58       <---------ARR11(3) <--- =========================================================MADS_MADS   <------ZmHOX2a(1)<------ZmHOX2a(2) >DOF2  --------->GLK1(1)           <---------ICU4    --------->MYB46(3)      --------->ARR11(3) ----   atcgagtgagatttcatattttgccttgttttcatcagtaattactaattacagtaccagccaagttctgaaggacgagagatcaacggatccgtcacgg  5796700                             <---------ANAC46                            <------NtERF2                            --------->RAP2.3(1)                           ------>NtERF2                          --------->DEAR3(1)                          --------->RAP2.6(2)                          --------->ANAC46                          --------->RAP2.3(2)                         --------->DEAR3(2)                         --------->ATERF1(1)                         --------->MYB46(3)                         --------->RAP2.3(1)                         --------->ERF1    --------->ANAC58    <---------At4g35610    <----------ID1   --------->REM1(2)    --------->ANAC58--------->ALFIN1 -->ANAC55(2)       <---------REM1(1) ---ANAC55(2)     <---------ANAC55(1) -->ANAC55(1)     <---------ANAC55(2) -->ANAC58        <---------ANAC46 -->ANAC58        <---------ANAC58 --LBD16          <---------TGA1a ->HVH21          <---------O2 -HVH21  ===================bZIP_DOF -TGA1   ---------->DOF2<---------ATERF1(1) ---->ZmHOX2a(2)  <---------bZIP60(2)              <---------YAB1 =====HOX2a_HOX2a <---------ANAC58             <---------ANAC58     --------->AtMYB61 ====HOX2a_HOX2a  --------->O2                 <---------ANAC58    <------ZmHOX2a(2) ----ZmHOX2a(2) <---------TGA2(2)        --------->SPL7     ------->MYC3                           << ------ARR14(2)----------->HVH21        --------->MYB52(1)  <-------MYC3                      <------ ----->ARR14(2)----------->TGA1        <---------SPL7--------->WOX13(1)                       <------   atcgagacgacaaaagcatgacgtgtagccgccgtatagatcgaacggtgcttatcaatccatgtgtcgatcacccctctcttctccattgaaattgctt  5796800                                                                                           ------->MYC2                                                                                           <-------MYC3                                                                                           ------->MYC3                                                                                          --------->ANAC58                                                                                          --------->ANAC58                                                                                         ------->TEIL                                                                                    <---------TGA1a                                                                                    <---------bZIP60(2)                                                                                    <---------O2<----                                                                                    =================                                                                                    <---------ANAC46                                                                                    <---------ANAC58                                                                                    <---------ANAC55(1)                                                                                    --------->TGA1a                                                                                    <---------ANAC58                                                              ================================bZIP_DOF                                                        <---------WRKY38(1)      ----------->HVH21                                                        *TSS  <----------DOF2   <-----------HVH21     <----------DOF2                                    <---------WRKY12  <---------MYB52(1)   ------ <<<<<<<TBF1                                          <-----------HVH21  =====================MYC_MYB ---ANAC58                                     --------->ARR14(2)        <-------GAMYB <-------TEIL ---ANAC58                            <<<<<<<<<TBF1<---------At5g28300  <-----------RAV1(1)<-------MYC2   cttcttcctttctctcaagactcaagactcaagactcttcttcttcaccgattcactgtcaacgctttgattttctgttgtctgtgacgtgcacgtttca  5796900          <---------AHL20(2)                          <---------GLK1(2)         <---------AHL20(2)                          -------->HAHB4         --------->AHL20(2)              --------->ANAC58      --------->AHL20(2)                 --------->ANAC58     --------->AHL20(2)                 ------>NtERF2<--------ATHB1         ---------->DOF2   <----------DOF2                  --------->ANAC46 <---------ICU4      <----------DOF2 --------CBF                        --------->ANAC58<---------YAB1     --------->At4g35610        <-- =============bZIP_DOF              --------->ANAC58<---------ATHB12  ------>NtERF2   <----------DOF2 --->ATHB12    <----------ID1---------->DOF2        --------->ICU4   <---------DEAR3(1)           ---   ttgggctttaaattaatgggccaaggcctattaaagtctcgccacgatagcttaatgattctcccaaatcgacggctgtaaagaggcgcttaaatttctc  5797000                                                                                           --------->ARR14(2)                                                                                           <---------ARR14(2)                                                                                        <---------ANAC55(2)                                                                                        --------->ANAC55(1)                                                                                        --------->ANAC58                                                                                        --------->ANAC55(2)                                                                                        --------->TGA1a                                                                                        <---------O2                                                                                        --------->ANAC58                                                                                        --------->O2                                                                                        <---------TGA1a                                                                                        =============                                                                                     ----------->HVH21                                                                                    <-----------HVH21                                                                                    <-----------TGA1                                                                                   --------->ANAC58                                                                                   ==================                                                                                   --------->O2                                                                                   <---------bZIP60(1)                                                                                   --------->TGA1a            --------->GLK1(2)                                                      --------->bZIP60(2)           <---------GLK1(2)                                                       --------->ANAC55(1)      ------------>AtMYB77                              <---------ANAC46           <---------O2     ----------->HVH21                                  <---------ANAC55(2)        --------->bZIP60(1)   <---------ANAC58                                     <---------bZIP60(2)        <---------TGA1a   <---------ANAC58                                     --------->ANAC55(2)        --------->ANAC58   <---------O2                                         <---------ANAC55(1)        --------->ANAC55(2)   <---------bZIP60(1)                                  <---------ANAC58           --------->ANAC46   --------->bZIP60(1)                                  <---------ANAC58           <---------ANAC55(2)   <---------ANAC46                                   <-----------GT1      --------->ARR11(3)   <---------ANAC55(2)                    <---------TOE2(3)                <---------ARR11(3)      --   <---------ANAC55(1)     <---------ARR11(3)      <---------ICU4         --------->At4g35610 -------   --------->ANAC55(2)     --------->ARR11(3)     <---------AHL20(2)    <---------GLK1(2)  ------->TEIL -------At4g35610     <---------MYB52(1) ---------->DOF2<---------O2   <---------At4g35610<---------CCA1(2) ------>At4g35610 ------->TEIL    <---------AtLEC2--------->AHL20(2)  ----------------------->TaNAC69(2)   agattacgtgacagtttctgaaccgttgagatgtttggatgactaaagtttattaattacgtggcacttactcagaagctctctcacgtcacgtatccgt  5797100            --------->O2            <---------O2            --------->TGA1a            <---------bZIP60(2)            <---------TGA1a                                                             --------->O2            <---------ANAC58                                                            <---------O2            <---------ANAC55(1)                                                      *TSS  ----------            <---------ANAC46                                          --------->At4g35610------->MYC3         ----------->HVH21                                       <---------ICU4    --------->ANAC58         ----------->TGA1                                       --------->ICU4     --------->ANAC58        <-----------HVH21                                   <---------ZAT14    --------->HSFB2a(2)       --------->ALFIN1                 <---------ANAC58    --------->ZAT14    <---------HSFB2a(2) =====================bZIP_DOF          <---------ANAC46    <---------SPL7 <---------At4g35610 ---------->DOF2                        <---------ANAC58  --------------->AtSPL3 --------->LBD16 ===========bZIP_DOF                  <---------ANAC46    --------------->AtSPL8--------->LBD16 ===========bZIP_DOF             <---------AHL20(2)      <---------At5g28300  <---------LBD16 ------->DOF5.7(2)              --------->AHL20(2)      <-----------GT1    --------->At4g35610     <- -->ANAC46  <---------ANAC58    <---------AHL20(2)  <---------AHL20(2)<---------At4g35610<-------MYC3   cgttaaagagtgtgacgtggaaaatgttttggaattaattttgtgtgtttgtattatatcaccgtactaattagctcatctcccgaagccatgtggtaat  5797200                                                                --------->ZAT18                                                                <---------ZAT14                                                                <---------ZAT18                                                             <---------ARR14(2)                                                            <------NtERF2                                                          <---------ANAC46                                                         <---------LBD16                                                         --------->ATERF1(1)                                                         <------NtERF2                                                         <---------At4g35610                                                        <---------ERF1                                                        <---------RRTF1(1)                                                        <---------RAP2.3(1)                                                        <---------DEAR4(2)                                                        ------>NtERF2               --------->ALFIN1                                                        <---------ATERF1(1)       <---------O2                                                        <---------ORA47(2)        <---------ANAC46                                                       <---------RRTF1(3)         <---------ANAC58                                                       <---------RAP2.3(3)        <---------ANAC58                                                       --------->DEAR3(1)       ------>ZmHOX2a(2)                                                       --------->ATERF1(2)     <------ZmHOX2a(2)                                                       <---------RAP2.3(2)    --------->ARR14(2)                                                       <---------RRTF1(2)     <---------ARR11(3)                                                       <---------ATERF1(2)    --------->ARR14(3)                                                       <---------DEAR3(1)     <---------ARR14(3)                                                      --------->ATERF1(1)     <---------ARR14(2)                                                      <---------ABI4(1)       <---------AGP1                                                     <---------RAP2.3(1)--------->LBD16                                                     --------->LBD16   <---------ETT(1)                                  --------->GLK1(2)  <---------ATERF1(1)------>NtERF2                 <---------AHL20(2)                <---------LBD16     <---------HSFB2a(2)               <---------YAB1     <---------ARR14(2) ------>NtERF2     <---------ATERF1(2)            --------->ICU4        --------->ARR14(2)<---------DEAR3(1) --------->HSFB2a(2)     <---------ANAC46    <---------MYB52(1)     <---------GLK1(1)      --------->ATERF1(2) ->GT1      --------->AHL20(2)<---------------------WRI1<---------RAP2.6(1)   --------->ARR11(3) --------YAB1<---------AHL20(2)   ------->TEIL  --------->GLK1(1)     <---------LBD16  ----------->GT1   tctaattttgtgtatttattattttctgttaagacgaatcggacagagagaactccggcggcggattgcacttccggcaagatctcgtggggataaataa  5797300                                   ----------->HVH21                                  <------NtERF2                                  --------->At5g28300                                 <---------MYB46(3)                                <---------DEAR3(1)              <---------KAN4(2)<---------ABI4(1)           ----------->GT1    --------->LBD16                             --------->GLK1(2)    <-------GAMYB           <---------LBD16                       <-------TEIL    <------NtERF2         --------->ARR14(2)               <---------TOE2(3)   <---------MYB46(3)     <---------ARR14(2)        <------ZmHOX2a(1)--------->ANAC58               =  <---------ANAC58        --------->GLK1(2)      <-----------RAV1(2) --------->ANAC58               <  <---------ANAC58      <---------HSFB2a(1)<---------ARR14(2)  --------->GLK1(1)         <---------AHL20(2)  <---------ANAC46      <---------HSFC1(2) --------->ARR14(2)  --------->At4g35610  <---------YAB1  <  <---------RAP2.6(2)   --------->HSFB2a(1)--------->ARR11(3)<------ZmHOX2a(1)    <---------At4g35610 <---------LBD16        --------->HSFC1(2)<------ZmHOX2a(1)<---------TOE1(3)  <-----------HVH21     -   gatggcggatgagaggtataatcggaagaatccggcggtgaagaggattttgcaggaggttaaggagatgcaagctaatccgtctgatgattttatgtct  5797400  Previous    Next  AGI:  At3g16990.1    Description:  TENA/THI-4 family protein. Identical to Seed maturation protein PM36 homolog [Arabidopsis Thaliana] (GB:Q9ASY9;GB:Q8LBN8); similar to unnamed protein product [Vitis vinifera] (GB:CAO44900.1); contains InterPro domain TENA/THI-4 protein/Coenzyme PQQ biosynthesis protein C (InterPro:IPR004305); contains InterPro domain Haem oxygenase-like, multi-helical (InterPro:IPR016084) Range:  from: 5795840    to: 5796856    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At3g17000.1    Description:  UBC32 (UBIQUITIN-CONJUGATING ENZYME 32); ubiquitin-protein ligase. similar to UBC34 (UBIQUITIN-CONJUGATING ENZYME 34) [Arabidopsis thaliana] (TAIR:AT1G17280.2); similar to UBC34 (UBIQUITIN-CONJUGATING ENZYME 34), ubiquitin-protein ligase [Arabidopsis thaliana] (TAIR:AT1G17280.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN72172.1); contains InterPro domain Ubiquitin-conjugating enzyme, E2; (InterPro:IPR000608); contains InterPro domain Ubiquitin-conjugating enzyme/RWD-like (InterPro:IPR016135) Range:  from: 5797185    to: 5799689    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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