Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                                     --                                                                                                 <---                                                                                                 ----                                                                                                 <---                                                                                                 ----                  <---------ARR11(3)                                                             <---                  --------->ARR11(3)                                                             <---                  <---------ARR11(1)                                                    <---------ANAC46                  --------->GLK1(2)                                                     <---------ANAC58                 <---------CCA1(2)                                                      <---------ANAC58         --------->At4g35610                                                         <---------ARR14(2)    --------->YAB1--------->ARR14(2)                                                 --------->ARR14(2) --------->TOE2(3)<---------ARR14(2)                                                <---------At4g35610 <---------------AGL15                                                              --------->ZAT2 -- --------------->AGL15                                                              --------->At4g35610 ---------------->AG <----------DOF2                                     <---------ANAC58       ----- ---------------->AGL2                  ----------->GT1                  <---------ANAC46      ------ ---------------->AGL3        --------->YAB1                             <---------ANAC58--------->LBD16 ---------------->AGL1     <----------DOF2       --------->ANAC46      ------->GAMYB<---------ZAT2 -- ----ATHB12      <---------ARR14(1)   <-----------RAV1(2)     <---------DAG2  ---------->DOF2 -------   tttccataataagcagagcaaatcttttactttcatcaaatcaggttatataagaaacttcaaaccttttcaacggcgtgcaaagcagctccgtggccac  5790100      --------->ARR14(2)     <---------At4g35610     --------->At4g35610     --------->ZAT2     <---------ZAT2 ---->MYB83 <---------ATHB12                                        <---------At4g35610 ------MYB111(1)                                              <---------ANAC58 ----->AtMYB61                                                <---------ANAC55(2) ------MYB111(2)                                              <---------ANAC58 ----->MYB46(3)                                               <---------ANAC46 ------ALFIN1                                   --------->ANAC58    --------->At4g35610 ------MYB55(2)         --------->YAB1          --------->ANAC58 ---------->DOF2 ---->MYB46(1) --------->ICU4              --------->ALFIN1<---------MYB52(1) ---->MYB46(3) <---------YAB1            <---------ANAC46<---------------AGL15 >NtERF2    --------->ICU4           <---------GLK1(1)   --------------->AGL15 ------>P <---------At4g35610       --------->ARR11(3)  <---------YAB1    --------->At4g35610   ----- -->RAP2.6(2)--------->YAB1         <---------ARR11(3)  ----------------->AGL1  <--------------------   caactccagctccgatgatgatcaaatcgtaatcgaaagatttcggtggagcgccattaccattacttgaagcagaagcggagacttggaatgacttcct  5790200                                                                           --------->LBD16                                                                           <------NtERF2                                                                     <------NtERF2                                                                    --------->LBD16                                                                  <---------LBD16                                                                  <------NtERF2                                                                 --------->LBD16   --------->LBD16                  <---------At5g28300                            ------>NtERF2 <---------ARR14(2)                <---------MYB52(1)                              --------->ANAC46 <---------LBD16           --------->ARR14(1)                                  <---------LBD16 --------->ARR14(2) <--          <---------GLK1(2)                            ------>MYB83--------->DEAR3(1)           <----          <---------ARR14(2)                           --------->MYB52(1)  <---------At4g35610  <----          --------->ARR14(2)    <---------At4g35610    ------>MYB46(1)     --------->At4g35610  <---- ->ZmHOX2a(1)   <---------ARR14(2)                    --------->MYB55(1) --------->ZAT18    --------- ---TaNAC69(2) <-------GAMYB   --------->MYB52(1)    --------->AtMYB61 <---------SPL7       <--------   acttagaaattggattcggttactgcgaatagccaactgattcgacgttgagaaaccaaacgcttcccgccggagtccgcagaaccggagacttctgggc  5790300                                    <------MYB83                                    <------MYB46(1)                                   --------->MYB59                                   <---------AtMYB61                             <-------MYC2                             <-------PIF5                             ------->MYC4                             ------->PIF5                             ------->MYC2                             <-------PIF4                             ------->PIF4                             <-------MYC4                             ------->MYC3                             <-------MYC3                            --------->TGA1a                            ===============================================bZIP_DOF                            --------->O2                            <---------O2              <---------HSFB2a(2)                            <---------TGA1a           --------->HSFB2a(2) ----NtERF2                ------------>OsbHLH66  <---------TGA1a          --------->At4g35610 -----ANAC58             <---------ZAT2           <---------O2--------->ANAC58 -----ANAC58         ------>ZmHOX2a(2)            =========================bZIP_DOF -----ANAC46       <---------ARR14(2)             --------->TGA1a          <---------At4g35610 >HSFB2a(2)        --------->ARR14(2)          --------->ANAC46 ---------->DOF2 <---------WOX13(1) -HSFB2a(2)  <-----------RAV1(2) <---------ANAC46 --------->O2--------->ANAC58--------->ATHB12   gtagagaaaacagaaccagatgatccgagcacgtggtttggtcttgtaaacgacgtctgggagaacgaaagcgccatagctgattgcattctaagagaca  5790400                                               <---------ATERF1(1)                                               --------->LBD16                        <------NtERF2                                              <---------ANAC46                       --------->LBD16                                             <---------LBD16                        <---------ANAC46                                     <-----------ARR10                              <---------DEAR3(1)                               ----------->HVH21                                   --------->ATERF1(1)                             --------->ZAT2 --------->LBD16                        <-----------------                             <---------ZAT2--------->ATERF1(2)                     <------NtERF2                             <---------At4g35610 ----------->HVH21                <---------ATERF1(1)                             --------->At4g35610<------NtERF2                    <---------DEAR3(1)                            ------->TEIL   <---------ATERF1(2)            --------->MYB46(3)                           <-----------RAV1(2)<---------DEAR3(1)          <---------MYB55(2)                         --------->ANAC46 --------->DEAR3(2)              <---------MYB52(2)                         --------->ANAC58--------->MYB52(1)             ----------->RAV1(1)        <-                    <------ZmHOX2a(1)--------->ARR14(2)      ----------->GT1--------->MYB52(1)     --        ----------->GT1  --------->ANAC58-------->P          <---------ZAT6------->GAMYB      -------   cagacagagagagagaaaacgaggaagacgcagctgacaaatctaccggcggagacagagtgagtgtaaatagccaacaaacggaggcggagttttcaaa  5790500   <----------DOF2 <------NtERF2                    <----------DOF2 ----WRI1                         <---------DAG2              <---------DAG2 --------ZAT18                 *TSS            <---------O2   <----------DOF2 ------->ZAT18                --------->MYB46(3)        <-----------GT1     <-----------GT1        -- --->DOF2                   <-----------GT1    --------->ANAC46    <----------DOF2----------->RAV1(2)   gcccgctttgtttgtttgttttgttttgtttaaccacttttttttgtacacgaggcatttacgacttttctttcattttttctaacctggtttaagtctt  5790600                                                           --------->AHL20(1)                                                           --------->AHL20(2)                                                           <---------AHL20(2)                                                           <---------AHL20(1)                                                          --------->AHL20(2)                                                          <---------AHL20(2)                                                      <---------AHL20(2)                                                  <---------AHL20(2)                                                 <---------AHL20(1)                                                 --------->AHL20(1)               --------->TOE2(3)            ------------>CBF                   <---------AHL20(1)             <---------MYB52(2)         <---------MYB46(3)                    <---------ARR11(3)             <------------MYB.PH3(2)      <------------CBF       ----------------->AGL2   --------->AHL20(2)    <-----------GT1   <<<<<<<<<<<<<<<<<LFY--------->TOE2(1)       --------->ARR11(3)        ----------->GT1 -------->DOF2         --------->TOE1(1) --------->At5g28300<---------AHL20(2)--------->MYB46(3)   aaaaagcccattgggtcaatagacctcgtagcccatttttggctgtgaatatatatttaaattaatttttggattttgtaacaaacttaaaaacaaatcg  5790700                                                                                               ------                                                                                               ------                                                                                            ---------                                                                                            <--------                                                                    ================================bZIP_DOF                              <----------DOF2                       <----------DOF2       --------->O2                              <---------DAG2                        <---------DAG2        --------->bZIP60(2)                          <------ZmHOX2a(1)                  <---------AHL20(2)           --------->TGA1a                   <---------ARR11(3)                        --------->AHL20(2)   --------->TOE1(1)                   <---------GLK1(2)      <---------ZAT14   --------->AHL20(2)    --------->TOE2(1)--   cttaaaaaactagtttctctagattttaggaactttttggatagtgaagttgattttcaaaattaaaatgctttatgaaatacctcgtagccacttcacg  5790800                                                       <---------HSFB2a(2)                                                       --------->HSFB2a(2)      <------ZmHOX2a(2)                       ----------->HVH21     <---------ARR11(3)                       --------->ETT(2)                     <---------ARR11(3)     --------->ARR11(3)                 <---------ANAC58                      <------NtERF2 --->ANAC58                             <---------ANAC58                     --------->ANAC58 --->ANAC58                           <-----------GT1  >>>>>>>ZML2           --------->ANAC58 >ZAT14------>ZmHOX2a(2)        ----------->GT1     --------->AGP1  ---------->DOF2--------->ARR11(3) -REM1(2)----------->GT1  <---------TOE2(3) <---------ANAC58      <---------AHL20(2) ------->YAB1             <---------TOE1(3) <---------ANAC58      --------->AHL20(2)   ctcataagatcgtgtaatttgtttcattagggttatgttattacttgctcgacagttctagtagtgaattaaaagtagccagcaagatgttgatttcgat  5790900                                                                   --------->ANAC46                                                             --------->DEAR3(1)                                                           <-----------HVH21                                                          --------->DEAR3(1)                                                         <---------At4g35610                                                      --------->ZAT2--------->MYB46(3)                                                      <---------ZAT2<---------ATHB12                                                      --------->ZAT14                                                      --------->At4g35610                                                      <---------ZAT14         <---------GLK1(1)                            <---------At4g35610      <----------DOF2 ------     --------->ALFIN1         --------->MYB46(3)   --------->At4g35610--------->MYB52(1)  -----------  --------->GLK1(2)  --------->GLK1(1)        <---------HSFB2a(1) --------->WOX13(1) <----------DOF2   gaagaatgtggaactcgcatgggaactcattaaccactactgccaagaaggctcgctgcagcgtcgtccaatcaacgaattctttgactttacaaaatat  5791000  Previous    Next  AGI:  At3g16950.1    Description:  LPD1 (LIPOAMIDE DEHYDROGENASE 1). similar to dihydrolipoamide dehydrogenase 2, plastidic / lipoamide dehydrogenase 2 (PTLPD2) [Arabidopsis thaliana] (TAIR:AT4G16155.1); similar to Pyridine nucleotide-disulphide oxidoreductase, class I [Medicago truncatula] (GB:ABD32316.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO44892.1); similar to hypothetical protein OsI_001713 [Oryza sativa (indica cultivar-group)] (GB:EAY73866.1); contains InterPro domain FAD/NAD-linked reductase, dimerisation; (InterPro:IPR016156); contains InterPro domain Pyridine nucleotide-disulphide oxidoreductase, class I; (InterPro:IPR001100); contains InterPro Range:  from: 5786391    to: 5790531    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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