Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                      <----------DOF2            <-----------HVH21               <---------ANAC58      <----------DOF2                      <---------YAB1               <---------ANAC46    ---------->ID1             <---------ALFIN1 -----------GT1<---------ANAC58   <-----------GT1      <----------DOF2<----------DOF2   gtttacattttggagttgcttactttgccactcgtttttctttttttttggtcacaactttgccactcgcttctttatgtttcttaaaatgtttttttct  5781400                                                              --------->ARR11(3)                                                              <---------ARR11(3)                                               --------->CCA1(2)                                              <---------ARR11(3)                    <---------------AGL15     --------->ARR11(3)                   <-----------------AGL3 ---------->DOF2   <---------YAB1     <---------YAB1   <----              --------->YAB1             <---------WRKY45 --------->YAB1 ----------->GT1       <-----             <---------YAB1     --------->ANAC58     <---------AHL20(2) <---------TOE1(3)<---------TOE1(3)          <---------YAB1        --------->ANAC58  ----------->GT1       <---------TOE2(3)<---------TOE2(3)        --------->YAB1        <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3) <---------AHL20(2)    --------->MYB59        ----------->GT1       <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(i2)--------->AHL20(2)<---------MYB46(3)   taagtaccaattgttattatacctatatttaggcatgccatagtcaaagatatagttaattcatgatattaaataaggtttattagtggtttaggtttaa  5781500                        <----------DOF2                      <------ZmHOX2a(2)                      <---------RVE1(1)                     <---------AGP1   --------->ZAT6              --------->ANAC58                     --------->AGP1  <---------ZAT18       --------->YAB1                     --------->ARR11(3)      --------->TOE2(3)    --------->ANAC46                     <---------ARR11(3)      --------->TOE1(3)    --------->ANAC58                    <---------CCA1(2)--------->ZAT18    --------->WOX13(1)         <---------YAB1------>ZmHOX2a(2)     --------->YAB1--------->AHL20(2)                       -         <---------ATHB51           <<<<<<<ZML2        --------->AHL20(2)            <---------YAB1<- -----TOE2(3) --------->ATHB12   <---------HSFB2a(2)  <---------ATHB12           <---------DAG2 <---- ------GT1--------->ATHB12       --------->HSFB2a(2)--------->WOX13(1)      ---------->DOF2 <--------   cgcttagttcgattattgatttagatcttttgttactagaacactaatcttaaacaatcaattaaaacacacaaaccagaaagccttatgaatgaagatt  5781600                                                                             <------MYB83                                                                             <------MYB46(1)                                                                           --------->ALFIN1                                                                           <--------P                                                                         <------MYB83 <---------ARR14(2)                                                                         <------MYB46(1)                                                                        --------->MYB111(1)   <---------------AtSPL8                        <---------TOE1(3)      --------->MYB111(2) -------->ATHB12                                 <---------TOE2(3)      --------->MYB46(2)       ---- --------YAB1    --------->YAB1   --------->AHL20(2)                    --------->MYB59         <---- ---TEIL         --------->ATHB12 <---------AHL20(2)               ---------->DOF2--------->At4g35610 -YAB1 <-------TEIL <---------TOE1(2)            <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)--------->ARR14(2)   catgaatggtacatgttattcataggtccaatttgataaattagaaagattaaggtagttttggagaataaaagtaggtaggggagcaaaactgcaaatt  5781700                                                                                 *TSS                                                                                 <---------ANAC58                                                                             --------->KAN4(2)                                                                            --------->KAN4(1)                                                                            --------->HSFC1(2)                                                                            <---------HSFC1(2)                                                                            --------->HSFB2a(1)                                                                            <---------KAN4(1)                                                                            <---------HSFB2a(1)                                                                        ------->GAMYB                                                                       --------->ANAC46                                                                     --------->MYB52(1)       <------                                       <---------GLK1(2)        --------->AHL20(2)         <---------AHL20(2)                                   ---------->DOF2              <---------AHL20(2)     <----------DOF2                                 --------->HSFB2a(2)            --------->AHL20(1) <---------MYB52(1) ---------->DOF2                 <---------HSFB2a(2)    ------>ZmHOX2a(1)  <---------KAN4(2)<-------- ----->YAB1 <---------YAB1  <----------DOF2      <---------ATHB12    <-----------GT1<---------ARR11(1) ---TEIL  --------->YAB1    <---------DAG2   ------------>CBF  --------->AHL20(2)<---------ANAC58   cataaaagtatatcatcgttgaaaattcaacttttccaaaagaaactctcaataaatcctctaaaaaaaattaacggaacattccgtttctttttaatca  5781800                                                                  --------->At4g35610                                                                 ----------->GT1                                                               <---------At4g35610                                                               --------->At4g35610      <----------DOF2                            >>>>>>>>>>GATA-1         <---------ARR11(3)          <----------DOF2 ---ATHB12             <---------ZAT2                --------->ARR11(3)    <---------ICU4 ---GT1                --------->ZAT2               --------->GLK1(1)      --------->YAB1   ctctcatcgtttcagagaccatcgaagctcgatttcattgtttctctcagaacgatatctatttgagcagataaaaatcataacttttgactttgttatt  5781900                                                                      ------>NtERF2                                                                      <---------ATERF1(1)                                                                     ----------->HVH21                                                                     --------->DEAR3(1)                                                                     <---------DEAR3(1)                               ---------->DOF2                      --------->ATERF1(1)                              <---------WRKY12                      --------->RAP2.3(1)                              <---------WRKY45                      <------NtERF2                             <<<<<<<<<<WRKY62                      <---------ATERF1(1)                             --------->WRKY18(1)                   <---------RAP2.3(1)                             <<<<<<<<<<WRKY40                     <---------DEAR3(1)                      <----------DOF2                      <---------YAB1         <---------ZAT18     <<<<<<<<<<WRKY18    <---------ZAT6<---------SPL7        <---------ZAT6<---------DAG2  ----------->GT1    --------->YAB1<------NtERF2    --------------------->WRI1<---------WRKY38(1)----------->GT1 <---------ORA47(1)                --   cagtttcttagtgttcttcgtctgctttttggtcaaagcttggaaaaacgagtgtgaaatcacgatggacggcgacggtttaggcagactaatcggctcg  5782000                                                                             --------->ATHB51                                                                          --------->YAB1                                                                          <---------ICU4                                                                         --------->ICU4                                                                         <---------YAB1                                                                       --------->YAB1                                                                       <--------HAHB4                                                                       <---------AHL20(2)                                                                       -------->ATHB1                              --------->ARR11(3)                       <---------ICU4                 --------->TOE2(3)------>MYB83                         --------->ATHB51                 --------------->AGL15                                <---------YAB1                 <---------------AGL15         --------->HSFB2a(2)    --------->ICU4                 <---------MYB59  ------>MYB46(1)        <---------AHL20(2) <---------YAB1         --                ----------------->AGL1        <---------LBD16         <---------ATHB51            <--                <-----------------AG--------->ZAT6   <---------AHL20(2)-------->HAHB4          <-----  <-------TEIL<---------CCA1(2) <---------MYB59<---------HSFB2a(2) --------->AHL20(2)         <------ ------->GLK1(1)<-----------------AGL1     <---------GLK1(1)       <---------AHL20(2) <---------YAB1<   gagattcatggattccataccttacaaggtaagacctagctctagatttctggatttatttttttttttttaattattattattgtttttgattcgctgg  5782100         <----------DOF2     ---------->ID1             <---------At4g35610   <---------MYB46(3)           --------->At4g35610   --------->MYB52(2)        <---------ANAC58  <---------TOE1(2)      <-------GAMYB                                      <---------LBD16 <---------MYB52(1)     --------->MYB52(2)                           <---------AHL20(2) ------->MYB52(2)       <---------MYB46(3)                        --------->AHL20(1) -----TEIL        <---------ANAC58                                <---------AHL20(1) ----MYB46(3)     <---------ANAC46    --------->At4g35610    --------->AHL20(2)                   <-- ---TOE1(2)       <---------ANAC58    <---------At4g35610    <---------AHL20(2)                   === XXXXXXXXXXXXXXXXXXXXXMIR840 <---------ANAC58 <---------MYB46(3) --------->AHL20(2)          <-------   ttcgtttgtttctttcagtgtcttgtttgttgtttgctgaagctgtagtagttgagcgtttttttaaatatataaaaactcgggtttggagtttattaca  5782200                  <---------MYB52(1)            ----------->HVH21            --------->ALFIN1          <---------TGA1a          <---------ANAC58          <---------ANAC46          =============================bZIP_DOF          =============================bZIP_DOF          <---------ANAC55(2)          --------->O2          <---------O2          --------->TGA1a          <---------bZIP60(2)          --------->ANAC55(2)          <---------ANAC58          <---------bZIP60(1)          --------->bZIP60(1)          >>>>>>>>>>HY5                                       ----------->GT1          <---------ANAC55(1)                                 <---------ZAT6       ----------->TGA1                                     <---------At5g28300       ----------->HVH21---------->ID1                    --------->ARR14(2) --------DOF2    <---------RAP2.6(3)         <---------At4g35610        <---------TOE1(3) ===================bZIP_DOF              ---------->DOF2 <---------ARR14(2)          <---------ARR14(2) ----GT1 ----------->STF1   <----------DOF2  --------->At4g35610        <---------TOE2(3)       <----   ctttgtattgtgacgtggccgtttttgttcctttgctgtgccattgaagctgaatttgcagttactgtgaaattgaggtttatatgtggatttagtatat  5782300  Previous    Next  AGI:  At3g16940.1    Description:  calmodulin-binding protein. Identical to Calmodulin-binding transcription activator 6 (CMTA6) [Arabidopsis Thaliana] (GB:Q9LSP8;GB:Q56WD5); similar to calmodulin-binding protein [Arabidopsis thaliana] (TAIR:AT4G16150.1); similar to Os07g0490200 [Oryza sativa (japonica cultivar-group)] (GB:NP_001059672.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN70197.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO44888.1); contains InterPro domain IQ calmodulin-binding region (InterPro:IPR000048); contains InterPro domain Immunoglobulin E-set (InterPro:IPR014756); contains InterPro domain CG-1 (InterPro:IPR005559); contains In Range:  from: 5781781    to: 5785991    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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