Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                              --------->ARR14(2)                                                            <---------ARR14(2)                                                          --------->ANAC58                                                   <-------MYC3                                                   ------->MYC3                                                  <---------O2 --------->ANAC58                                                  --------->O2 --------->ANAC46                                                  <---------TGA1a                                                  --------->TGA1a  <---------At4g35610 ----------GT1                        --------->ARR14(2)  ----------->ARR10 -->AHL20(2)           --------->AHL20(2)     --------->MYB46(3)   <------NtERF2 ---AHL20(2)           <---------AHL20(2) <---------At4g35610  --------->ANAC58  <<<<<<<<<NAM       - ->AHL20(2) ------>ZmHOX2a(2)         <---------ARR14(2)  --------->ANAC58 --------->TOE2(3)       --   taaaccggtttggatcgctctaaaattaaacttacatgaggttttgctcccaacgtggccaagaaacgcagcgacttccttcatcccttgaagtttctca  5777500                                           --------->ICU4                                        --------->ICU4                                   --------->RAP2.3(2)                                   ----------->RAV1(1)                     --------->ALFIN1                                   --------->RAP2.6(2)                    <-----------HVH21                                   --------->DEAR3(1)                    <---------ANAC58                                  --------->ATERF1(1)                    <---------ANAC46                                 --------->ZAT2                          <---------ANAC58                                 <---------At4g35610                    <------NtERF2                                 <------NtERF2                         ------>NtERF2                                 <---------ATERF1(1)                  <---------DEAR3(1)                                 <---------ZAT2                      <------NtERF2                                 --------->At4g35610                 --------->ATERF1(1)                                <---------ATERF1(1)                  --------->SPL7                              <------NtERF2<---------YAB1           --------->MYB52(1)                              --------->At4g35610                   <---------ATERF1(1)                              <---------At4g35610                  --------->DEAR3(1)     <---------MYB52(1)                            --------->ANAC46    --------->ATHB12   ----------->HVH21     <-------GAMYB                      <------MYB83--------->RAP2.3(1)             --------->DEAR3(2)    <---------ZAT6 -------->At4g35610   <------MYB46(1)<------NtERF2            ---------->DOF2       <---------ZAT14 --------->RAV1(1)  <---------ANAC46--------->LBD16------>ZmHOX2a(2)------>NtERF2   --------->ZAT14   ccagcagtaccgaaaccaagaggctggtactcggcagccgcagtaatgaatgatcggtaatcccaaaagccgacggcgtgagccactggactgttacgct  5777600                                                                                            ---------           <---------HSFB2a(2)                                                             <---------           --------->HSFB2a(2)                                        ------>MYB46(1)   <----------DOF2        --------->GLK1(2)                                --------->YAB1                 ------>ZmHOX2a(1)       <---------GLK1(2)                        <---------MYB46(3)    ------>MYB83     --------->TOE2(3)     ----------->ARR10         --------->AHL20(2)     ----------->RAV1(1)------>ZmHOX2a(1)<----------   tagagaatagattctcgaattgatatgtctcaaaaaaatcggagattgtatggttgcaacaatactcggaccatcctttgcattcccatcctttgtcgca  5777700                                                         --------->ARR14(2)                                                         <---------ARR14(2)                                                         --------->GLK1(2)       --------->LBD16                  --------->YAB1                     --------->ANAC58          <---------LBD16     <-----------GT1                                 --------->ANAC58        --------->ARR14(2) <---------AHL20(2)                              --------->HSFB2a(1)--------->WRKY38(1) --------->AHL20(2)    ----------->RAV1(2)       <---------HSFB2a(1)--------->WRKY12            ----- ->ID1            <---------ICU4                 --------->HSFC1(2) --------->WRKY45          ------- --HVH21    --------->YAB1             --------->WRKY12 <---------GLK1(2)    <---------ARR14(2)------ -RAV1(1)<----------DOF2       <----------DOF2   <---------HSFC1(2) ----------->HVH21         -------   taattttttacctttcacaatcttcaccagaggctttctcgttgaactcgaaggctcggaatcttcagcgttgacaagggttccggtttgaaacacaacc  5777800                                              <---------WOX13(1)                                            <---------MYB46(3)     ------->GAMYB                          --------->ATHB12                                      <-- ---->AtMYB61              --------->MYB52(1) <--------P      <----------DOF2        <---------YAB1 -->ANAC58  --------->ANAC58    <---------ARR14(2)   <------------------------ANAC81>>>>>>>>>>>>>>>>>LFY --->MYB46(3)       ----------->GT1        <---------YAB1   ---------->ID1        ----------->HVH21 -->ANAC58  --------->ANAC58    --------->ARR14(2)  <---------AHL20(2)    --------->WOX13(1)   *TSS   aatgcaaccgtgagaagcaatagggagaatagcggtttcgaaaccatggttgatttttttttgtctttttcttcgtctatcaatgtgaccattgtatgta  5777900                                                                               <------ZmHOX2a(1) <---                                                                              <------MYB46(1)  <-----                                                                            <--------P     <---------DAG2                                  <---------ANAC58                        --------->MYB55(2)   <-----   ----------->TBP                <---------ANAC46                       <---------AtMYB61 <---------   --------->AHL20(2)             <---------ANAC58            <---------LBD16 <------MYB83<---------ANAC58 <---------DAG2                   <---------bZIP60(2)    <---------TOE2(3)<---------MYB46(3)   <----- <----------DOF2           <---------ZAT14         <------ZmHOX2a(1)   <------MYB83----------->ARR10 ---------GT1              --------->ZAT14      <------ZmHOX2a(1)      <------MYB46(1)    <---------ANAC58   taactttatatacaaacatatatgtatagagtagtgtcgtgttcgttttaggaggaattaagttttcggaatttggtggtaggagaagagttgcttttcg  5778000              <------MYB83                 <---------ANAC55(1)              <------MYB46(1)              <---------ANAC55(2) ------MYB52(1)                           <-------TEIL ----ANAC58<---------AtLEC2              <-----------GT1                           --------->At5g28300 ----ANAC46<---------ANAC58       --------->ALFIN1                                ----------->GT1 -DOF2     <---------ANAC58 --------------->AGL15 <---------TOE2(3)            <---------AGP1 ----ANAC58<---------ANAC46<---------ANAC46--------->ANAC55(2)            --------->ANAC46     <-----   tgagtttttttttgcttggttttgaagtttcttagagtggaagttacatgttaagaaaattggtcgaagcatgtacacgtagaactgtaaatgttttaaa  5778100                                                                                 <---------ARR11(3)                                            --------->YAB1                       --------->ARR11(3)                                           --------->AHL20(2)                    <---------GLK1(2)                                       --------->AHL20(1)                     --------->YAB1                                       --------->AHL20(2)                 <---------YAB1           --                                       <---------AHL20(2)             <----------DOF2            <---                              <-----------GT1<---------AHL20(2)   --------->REM1(1) <---------AHL20(2) ------GT1       ----------->GT1 <---------MYB59  ----------->GT1 <---------ALFIN1<---------RVE1(1)<-   cttcatttttctaacaaaatggttaatctattttaccaaaataaaataaaaatggttaatctattgcaacacctttacaattagatttttttttggttta  5778200                 <---------ICU4                 -------->HAHB4                 --------->ATHB12                 <--------ATHB1                                                --------->HSFB2a(2)                <---------YAB1                                             <---------ANAC46                <---------ATHB12                                      <-----------RAV1(1)         <---------YAB1                                            --------->ARR14(2)       --------->YAB1   <----------ARF1                        <---------At4g35610 --------->HVH21--------->ICU4                          --------->ATHB12  <---------At4g35610 ------------AtSPL8<---------WOX13(1)            <---------GLK1(1) <---------ARR14(2) --------SPL7  <---------TOE2(3)   <---------TOE2(3)----------->GT1<---------MYB52(1)   ggggacggattataactaatgattgggaaacaagtttgagatagaaattggaaatcgtttattggagcggttttgttgctgctagaatactttggaacta  5778300                                                <---------ARR11(3)                        --------->ANAC46 <---------AHL20(2)                       --------->LBD16  --------->ARR11(3)              <-----------GT1           <---------ARR11(3)               <---------WRKY18(1)      ---            <---------AHL20(2)          <---------AHL20(2)            <---------ICU4              ===          <---------AHL20(2)            --------->AHL20(2)            --------->YAB1---------->DOF2        <---------AHL20(2)              --------->AHL20(1)           <---------ATHB12--------->DAG2       <---------ARR11(3)               <---------AHL20(1) --------->ATHB12         =================       <---------AHL20(1)    <---------YAB1     --------->ARR11(3)  --------->ARR14(2)      --------- <-----------GT1 <----------DOF2------->TEIL   <<<<<<<<<RAP2.2      <---------ARR14(2) ----------->GT1   atttaaccatatattttttcttttccaggctatgaatgtcaatatatttagatattgaaaatgtttggccaatcttgaccttgacaaaaaggaataaaaa  5778400  Previous    Next  AGI:  At3g16920.1    Description:  chitinase. similar to POM1 (POM-POM1), chitinase [Arabidopsis thaliana] (TAIR:AT1G05850.1); similar to chitinase-like protein [Gossypium hirsutum] (GB:AAQ56599.1); contains InterPro domain Endochitinase (InterPro:IPR016283); contains InterPro domain Glycoside hydrolase, family 19, catalytic; (InterPro:IPR000726) Range:  from: 5776492    to: 5777895    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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